RNA–Protein interactions for RNA: ENST00000359366.9

ATXN3-202, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 2,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-202ENST00000359366 GINS3Q9BRX5 216 aa4.12□□□□□ -1.75
ATXN3-202ENST00000359366 TPSG1Q9NRR2 321 aa4.12□□□□□ -1.75
ATXN3-202ENST00000359366 FKBP11Q9NYL4 201 aa4.12□□□□□ -1.75
ATXN3-202ENST00000359366 BET1LQ9NYM9 111 aa4.12□□□□□ -1.75
ATXN3-202ENST00000359366 KAAG1Q9UBP8 84 aa4.12□□□□□ -1.75
ATXN3-202ENST00000359366 MXRA5Q9NR99 2828 aa4.12□□□□□ -1.75
ATXN3-202ENST00000359366 IGHV2-26A0A0B4J1V2 119 aa4.11□□□□□ -1.75
ATXN3-202ENST00000359366 HELTA6NFD8 242 aa4.11□□□□□ -1.75
ATXN3-202ENST00000359366 FBLL1A6NHQ2 334 aaKnown RBP4.11□□□□□ -1.75
ATXN3-202ENST00000359366 C9JQL5 133 aa4.11□□□□□ -1.75
ATXN3-202ENST00000359366 E7EUB6 86 aa4.11□□□□□ -1.75
ATXN3-202ENST00000359366 RRHO14718 337 aa4.11□□□□□ -1.75
ATXN3-202ENST00000359366 HMGB3O15347 200 aaKnown RBP4.11□□□□□ -1.75
ATXN3-202ENST00000359366 GAPDHP04406 335 aaKnown RBP4.11□□□□□ -1.75
ATXN3-202ENST00000359366 COL8A1P27658 744 aa4.11□□□□□ -1.75
ATXN3-202ENST00000359366 SULT1A2P50226 295 aa4.11□□□□□ -1.75
ATXN3-202ENST00000359366 ERVK-16P61578 105 aa4.11□□□□□ -1.75
ATXN3-202ENST00000359366 HERV-K104P63124 156 aa4.11□□□□□ -1.75
ATXN3-202ENST00000359366 CCL20P78556 96 aa4.11□□□□□ -1.75
ATXN3-202ENST00000359366 SLC38A11Q08AI6 406 aa4.11□□□□□ -1.75
ATXN3-202ENST00000359366 C10orf55Q5SWW7 151 aa4.11□□□□□ -1.75
ATXN3-202ENST00000359366 FAM71F2Q6NXP2 309 aa4.11□□□□□ -1.75
ATXN3-202ENST00000359366 C19orf35Q6ZS72 473 aa4.11□□□□□ -1.75
ATXN3-202ENST00000359366 OR8B3Q8NGG8 313 aa4.11□□□□□ -1.75
ATXN3-202ENST00000359366 OR8B2Q96RD0 313 aa4.11□□□□□ -1.75
ATXN3-202ENST00000359366 RAB40CQ96S21 281 aa4.11□□□□□ -1.75
ATXN3-202ENST00000359366 IMMP2LQ96T52 175 aa4.11□□□□□ -1.75
ATXN3-202ENST00000359366 ATP5SQ99766 215 aa4.11□□□□□ -1.75
ATXN3-202ENST00000359366 LINC00574Q9H8X3 128 aa4.11□□□□□ -1.75
ATXN3-202ENST00000359366 WSB1Q9Y6I7 421 aa4.11□□□□□ -1.75
ATXN3-202ENST00000359366 SONP18583 2426 aaKnown RBP4.11□□□□□ -1.75
ATXN3-202ENST00000359366 HECTD1Q9ULT8 2610 aa4.11□□□□□ -1.75
ATXN3-202ENST00000359366 FASNP49327 2511 aaKnown RBP4.11□□□□□ -1.75
ATXN3-202ENST00000359366 TRAV25A0A0B4J276 109 aa4.11□□□□□ -1.75
ATXN3-202ENST00000359366 A0A1B0GW64 132 aa4.11□□□□□ -1.75
ATXN3-202ENST00000359366 IGHV3-48P01763 117 aa4.11□□□□□ -1.75
ATXN3-202ENST00000359366 SAA1P0DJI8 122 aaPredicted RBP4.11□□□□□ -1.75
ATXN3-202ENST00000359366 SLC25A6P12236 298 aa4.11□□□□□ -1.75
ATXN3-202ENST00000359366 LGALS4P56470 323 aa4.11□□□□□ -1.75
ATXN3-202ENST00000359366 GNB2P62879 340 aa4.11□□□□□ -1.75
ATXN3-202ENST00000359366 ELOBQ15370 118 aa4.11□□□□□ -1.75
ATXN3-202ENST00000359366 PDZD11Q5EBL8 140 aa4.11□□□□□ -1.75
ATXN3-202ENST00000359366 MOB3BQ86TA1 216 aa4.11□□□□□ -1.75
ATXN3-202ENST00000359366 DTX2Q86UW9 622 aa4.11□□□□□ -1.75
ATXN3-202ENST00000359366 ZNF843Q8N446 348 aa4.11□□□□□ -1.75
ATXN3-202ENST00000359366 TMEM170AQ8WVE7 144 aa4.11□□□□□ -1.75
ATXN3-202ENST00000359366 HARBI1Q96MB7 349 aa4.11□□□□□ -1.75
ATXN3-202ENST00000359366 SIGMAR1Q99720 223 aa4.11□□□□□ -1.75
ATXN3-202ENST00000359366 TMEM133Q9H2Q1 129 aa4.11□□□□□ -1.75
ATXN3-202ENST00000359366 HEYLQ9NQ87 328 aaPredicted RBP4.11□□□□□ -1.75
ATXN3-202ENST00000359366 NAT8Q9UHE5 227 aa4.11□□□□□ -1.75
ATXN3-202ENST00000359366 HILPDAQ9Y5L2 63 aa4.11□□□□□ -1.75
ATXN3-202ENST00000359366 CREBBPQ92793 2442 aa4.11□□□□□ -1.75
ATXN3-202ENST00000359366 KMT2BQ9UMN6 2715 aaPredicted RBP4.11□□□□□ -1.75
ATXN3-202ENST00000359366 TRAV34A0A0B4J273 112 aa4.1□□□□□ -1.75
ATXN3-202ENST00000359366 C15orf62A8K5M9 175 aa4.1□□□□□ -1.75
ATXN3-202ENST00000359366 H0YJW9 148 aa4.1□□□□□ -1.75
ATXN3-202ENST00000359366 SLC17A3O00476 420 aa4.1□□□□□ -1.75
ATXN3-202ENST00000359366 PDE6DO43924 150 aa4.1□□□□□ -1.75
ATXN3-202ENST00000359366 NDUFB8O95169 186 aa4.1□□□□□ -1.75
ATXN3-202ENST00000359366 REG1AP05451 166 aa4.1□□□□□ -1.75
ATXN3-202ENST00000359366 IGFBP2P18065 325 aa4.1□□□□□ -1.75
ATXN3-202ENST00000359366 CEACAM3P40198 252 aa4.1□□□□□ -1.75
ATXN3-202ENST00000359366 THBS3P49746 956 aa4.1□□□□□ -1.75
ATXN3-202ENST00000359366 SRSF1Q07955 248 aaKnown RBP eCLIP4.1□□□□□ -1.75
ATXN3-202ENST00000359366 MLANAQ16655 118 aa4.1□□□□□ -1.75
ATXN3-202ENST00000359366 C5orf47Q569G3 176 aa4.1□□□□□ -1.75
ATXN3-202ENST00000359366 GFI1BQ5VTD9 330 aa4.1□□□□□ -1.75
ATXN3-202ENST00000359366 CCDC144NLQ6NUI1 221 aa4.1□□□□□ -1.75
ATXN3-202ENST00000359366 ZNF833PQ6ZTB9 187 aa4.1□□□□□ -1.75
ATXN3-202ENST00000359366 Q8N7P7 452 aa4.1□□□□□ -1.75
ATXN3-202ENST00000359366 LFNGQ8NES3 379 aa4.1□□□□□ -1.75
ATXN3-202ENST00000359366 NEIL1Q96FI4 390 aaPredicted RBP4.1□□□□□ -1.75
ATXN3-202ENST00000359366 MRAP2Q96G30 205 aa4.1□□□□□ -1.75
ATXN3-202ENST00000359366 TIMD4Q96H15 378 aa4.1□□□□□ -1.75
ATXN3-202ENST00000359366 BPESC1Q9GZL8 116 aa4.1□□□□□ -1.75
ATXN3-202ENST00000359366 SLC35B3Q9H1N7 401 aa4.1□□□□□ -1.75
ATXN3-202ENST00000359366 SLC45A2Q9UMX9 530 aa4.1□□□□□ -1.75
ATXN3-202ENST00000359366 TCF19Q9Y242 345 aa4.1□□□□□ -1.75
ATXN3-202ENST00000359366 POLR3KQ9Y2Y1 108 aaPredicted RBP4.1□□□□□ -1.75
ATXN3-202ENST00000359366 STRAPQ9Y3F4 350 aaKnown RBP4.1□□□□□ -1.75
ATXN3-202ENST00000359366 OR51B2Q9Y5P1 312 aa4.1□□□□□ -1.75
ATXN3-202ENST00000359366 URGCP-MRPS24S4R325 110 aa4.1□□□□□ -1.75
ATXN3-202ENST00000359366 NOTCH2Q04721 2471 aa4.1□□□□□ -1.75
ATXN3-202ENST00000359366 UMAD1C9J7I0 102 aa4.1□□□□□ -1.75
ATXN3-202ENST00000359366 TGFAP01135 160 aa4.1□□□□□ -1.75
ATXN3-202ENST00000359366 IGHV4-39P01824 125 aa4.1□□□□□ -1.75
ATXN3-202ENST00000359366 TRGC2P03986 189 aa4.1□□□□□ -1.75
ATXN3-202ENST00000359366 ESDP10768 282 aa4.1□□□□□ -1.75
ATXN3-202ENST00000359366 MMP9P14780 707 aa4.1□□□□□ -1.75
ATXN3-202ENST00000359366 GPR6P46095 362 aaPredicted RBP4.1□□□□□ -1.75
ATXN3-202ENST00000359366 ZNF266Q14584 549 aa4.1□□□□□ -1.75
ATXN3-202ENST00000359366 BATFQ16520 125 aa4.1□□□□□ -1.75
ATXN3-202ENST00000359366 RTL8BQ17RB0 113 aa4.1□□□□□ -1.75
ATXN3-202ENST00000359366 TPTE2P1Q5T6R2 138 aa4.1□□□□□ -1.75
ATXN3-202ENST00000359366 BTNL8Q6UX41 500 aa4.1□□□□□ -1.75
ATXN3-202ENST00000359366 TMEM14EPQ6UXP3 125 aa4.1□□□□□ -1.75
ATXN3-202ENST00000359366 TEX43Q6ZNM6 134 aa4.1□□□□□ -1.75
ATXN3-202ENST00000359366 OR4B1Q8NGF8 309 aa4.1□□□□□ -1.75
ATXN3-202ENST00000359366 OR9G1Q8NH87 305 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms