RNA–Protein interactions for RNA: ENST00000358901.10

VCP-201, Transcript of valosin containing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCP, Length 4,370 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-201ENST00000358901 EEF1AKMT3Q96AZ1 226 aa11.37□□□□□ -0.59
VCP-201ENST00000358901 C1orf147Q96MC9 270 aaPredicted RBP11.37□□□□□ -0.59
VCP-201ENST00000358901 DMRTA2Q96SC8 542 aa11.37□□□□□ -0.59
VCP-201ENST00000358901 AGMATQ9BSE5 352 aa11.37□□□□□ -0.59
VCP-201ENST00000358901 RPUSD1Q9UJJ7 312 aaKnown RBP11.37□□□□□ -0.59
VCP-201ENST00000358901 SOX21Q9Y651 276 aaPredicted RBP11.37□□□□□ -0.59
VCP-201ENST00000358901 GTF3C1Q12789 2109 aa11.36□□□□□ -0.59
VCP-201ENST00000358901 PEF1Q9UBV8 284 aaKnown RBP11.36□□□□□ -0.59
VCP-201ENST00000358901 TCRBV4S1A1TA0A5B7 111 aa11.36□□□□□ -0.59
VCP-201ENST00000358901 SMIM12Q96EX1 92 aa11.36□□□□□ -0.59
VCP-201ENST00000358901 FNDC1Q4ZHG4 1894 aaPredicted RBP11.36□□□□□ -0.59
VCP-201ENST00000358901 FAM208BQ5VWN6 2430 aa11.36□□□□□ -0.59
VCP-201ENST00000358901 NOTCH4Q99466 2003 aa11.36□□□□□ -0.59
VCP-201ENST00000358901 TRAV3A0A0B4J244 114 aa11.36□□□□□ -0.59
VCP-201ENST00000358901 B3GALT5-AS1P59052 145 aa11.36□□□□□ -0.59
VCP-201ENST00000358901 PTPRQQ9UMZ3 2332 aa11.36□□□□□ -0.59
VCP-201ENST00000358901 PRB4P10163 310 aaPredicted RBP11.35□□□□□ -0.59
VCP-201ENST00000358901 COL4A6Q14031 1691 aa11.35□□□□□ -0.59
VCP-201ENST00000358901 LINC00473A8K010 186 aa11.35□□□□□ -0.59
VCP-201ENST00000358901 IGHV1-46P01743 117 aa11.35□□□□□ -0.59
VCP-201ENST00000358901 ORMDL3Q8N138 153 aa11.35□□□□□ -0.59
VCP-201ENST00000358901 TMEM256Q8N2U0 113 aa11.35□□□□□ -0.59
VCP-201ENST00000358901 VOPP1Q96AW1 172 aa11.35□□□□□ -0.59
VCP-201ENST00000358901 MALRD1Q5VYJ5 2156 aa11.35□□□□□ -0.59
VCP-201ENST00000358901 TRGV3P03979 118 aa11.35□□□□□ -0.59
VCP-201ENST00000358901 SYT8Q8NBV8 401 aa11.35□□□□□ -0.59
VCP-201ENST00000358901 TMEM133Q9H2Q1 129 aa11.35□□□□□ -0.59
VCP-201ENST00000358901 RAXQ9Y2V3 346 aa11.35□□□□□ -0.59
VCP-201ENST00000358901 NPIPB6E9PJ23 425 aa11.35□□□□□ -0.59
VCP-201ENST00000358901 ACACBO00763 2458 aa11.35□□□□□ -0.59
VCP-201ENST00000358901 SFTPCP11686 197 aa11.35□□□□□ -0.59
VCP-201ENST00000358901 ATP5J2P56134 94 aa11.35□□□□□ -0.59
VCP-201ENST00000358901 LHFPL4Q7Z7J7 247 aa11.35□□□□□ -0.59
VCP-201ENST00000358901 ARPC1AQ92747 370 aa11.35□□□□□ -0.59
VCP-201ENST00000358901 CHODLQ9H9P2 273 aa11.35□□□□□ -0.59
VCP-201ENST00000358901 SPSB3Q6PJ21 355 aa11.34□□□□□ -0.59
VCP-201ENST00000358901 FER1L6-AS1Q8NA97 138 aa11.34□□□□□ -0.59
VCP-201ENST00000358901 DDB2Q92466 427 aa11.34□□□□□ -0.59
VCP-201ENST00000358901 KIR2DL4Q99706 377 aa11.34□□□□□ -0.59
VCP-201ENST00000358901 GNB1LQ9BYB4 327 aa11.34□□□□□ -0.59
VCP-201ENST00000358901 IGHV3OR16-12A0A075B7B8 117 aa11.34□□□□□ -0.59
VCP-201ENST00000358901 FAM90A9PA6NNJ1 464 aa11.34□□□□□ -0.59
VCP-201ENST00000358901 CD33P20138 364 aa11.34□□□□□ -0.59
VCP-201ENST00000358901 Q6P435 159 aa11.34□□□□□ -0.59
VCP-201ENST00000358901 FAM159AQ6UWV7 190 aa11.34□□□□□ -0.59
VCP-201ENST00000358901 CD177Q8N6Q3 437 aa11.34□□□□□ -0.59
VCP-201ENST00000358901 FOXL1Q12952 345 aa11.34□□□□□ -0.59
VCP-201ENST00000358901 Q6AWC8 147 aa11.34□□□□□ -0.59
VCP-201ENST00000358901 FOXL2NBQ6ZUU3 175 aa11.34□□□□□ -0.59
VCP-201ENST00000358901 BMPERQ8N8U9 685 aa11.34□□□□□ -0.59
VCP-201ENST00000358901 CD59P13987 128 aa11.33□□□□□ -0.6
VCP-201ENST00000358901 ASCL4Q6XD76 172 aa11.33□□□□□ -0.6
VCP-201ENST00000358901 RNF125Q96EQ8 232 aa11.33□□□□□ -0.6
VCP-201ENST00000358901 COQ2Q96H96 371 aa11.33□□□□□ -0.6
VCP-201ENST00000358901 OTORQ9NRC9 128 aa11.33□□□□□ -0.6
VCP-201ENST00000358901 TRBV6-6A0A0A6YYG2 114 aa11.33□□□□□ -0.6
VCP-201ENST00000358901 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.33□□□□□ -0.6
VCP-201ENST00000358901 C9JCJ5 164 aa11.33□□□□□ -0.6
VCP-201ENST00000358901 FOXH1O75593 365 aa11.33□□□□□ -0.6
VCP-201ENST00000358901 FAM90A2PQ658T7 463 aa11.33□□□□□ -0.6
VCP-201ENST00000358901 MGST2Q99735 147 aa11.33□□□□□ -0.6
VCP-201ENST00000358901 IGKV1-6A0A0C4DH72 117 aa11.33□□□□□ -0.6
VCP-201ENST00000358901 COX6CP09669 75 aa11.33□□□□□ -0.6
VCP-201ENST00000358901 KIR3DL3Q8N743 410 aa11.33□□□□□ -0.6
VCP-201ENST00000358901 HELZP42694 1942 aaKnown RBP11.33□□□□□ -0.6
VCP-201ENST00000358901 MYOD1P15172 320 aa11.32□□□□□ -0.6
VCP-201ENST00000358901 NTF4P34130 210 aa11.32□□□□□ -0.6
VCP-201ENST00000358901 ZNF56Q15929 161 aa11.32□□□□□ -0.6
VCP-201ENST00000358901 NBR2O15453 112 aa11.32□□□□□ -0.6
VCP-201ENST00000358901 TMEM50AO95807 157 aa11.32□□□□□ -0.6
VCP-201ENST00000358901 LINC00614P0C842 121 aa11.32□□□□□ -0.6
VCP-201ENST00000358901 AREGP15514 252 aa11.32□□□□□ -0.6
VCP-201ENST00000358901 PRR31Q5SQ13 230 aa11.32□□□□□ -0.6
VCP-201ENST00000358901 Q6ZS49 121 aa11.32□□□□□ -0.6
VCP-201ENST00000358901 FOXC2Q99958 501 aa11.32□□□□□ -0.6
VCP-201ENST00000358901 NOTCH2Q04721 2471 aa11.32□□□□□ -0.6
VCP-201ENST00000358901 TRPM7Q96QT4 1865 aa11.32□□□□□ -0.6
VCP-201ENST00000358901 TRAV9-2A0A087WT02 112 aa11.32□□□□□ -0.6
VCP-201ENST00000358901 SMIM13P0DJ93 91 aa11.32□□□□□ -0.6
VCP-201ENST00000358901 CLEC19AQ6UXS0 136 aa11.32□□□□□ -0.6
VCP-201ENST00000358901 NIT1Q86X76 327 aa11.32□□□□□ -0.6
VCP-201ENST00000358901 PCNX2A6NKB5 2137 aa11.32□□□□□ -0.6
VCP-201ENST00000358901 LGALS3P17931 250 aaKnown RBP11.32□□□□□ -0.6
VCP-201ENST00000358901 ZNF585BQ52M93 769 aa11.32□□□□□ -0.6
VCP-201ENST00000358901 TTC9CQ8N5M4 171 aa11.32□□□□□ -0.6
VCP-201ENST00000358901 LIME1Q9H400 295 aa11.32□□□□□ -0.6
VCP-201ENST00000358901 TMEM170BQ5T4T1 132 aa11.31□□□□□ -0.6
VCP-201ENST00000358901 RNASE6Q93091 150 aaKnown RBP11.31□□□□□ -0.6
VCP-201ENST00000358901 PSG8Q9UQ74 426 aa11.31□□□□□ -0.6
VCP-201ENST00000358901 ZNF257Q9Y2Q1 563 aa11.31□□□□□ -0.6
VCP-201ENST00000358901 C15orf62A8K5M9 175 aa11.31□□□□□ -0.6
VCP-201ENST00000358901 GFRA3O60609 400 aa11.31□□□□□ -0.6
VCP-201ENST00000358901 PLSCR4Q9NRQ2 329 aa11.31□□□□□ -0.6
VCP-201ENST00000358901 THSD7BQ9C0I4 1608 aa11.31□□□□□ -0.6
VCP-201ENST00000358901 NUDT10Q8NFP7 164 aa11.31□□□□□ -0.6
VCP-201ENST00000358901 TSKUQ8WUA8 353 aa11.31□□□□□ -0.6
VCP-201ENST00000358901 NUDT11Q96G61 164 aa11.31□□□□□ -0.6
VCP-201ENST00000358901 NLRC5Q86WI3 1866 aa11.31□□□□□ -0.6
VCP-201ENST00000358901 PLXND1Q9Y4D7 1925 aa11.31□□□□□ -0.6
VCP-201ENST00000358901 A0A1B0GW15 77 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms