RNA–Protein interactions for RNA: ENST00000358808.6

CLIP1-202, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLIP1, Length 5,880 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-202ENST00000358808 LINC00518Q8N0U6 118 aa8.5□□□□□ -1.05
CLIP1-202ENST00000358808 KLHL30-AS1Q8NEE0 82 aa8.5□□□□□ -1.05
CLIP1-202ENST00000358808 RNF166Q96A37 237 aaPredicted RBP8.5□□□□□ -1.05
CLIP1-202ENST00000358808 SNHG12Q9BXW3 62 aa8.5□□□□□ -1.05
CLIP1-202ENST00000358808 TMEM133Q9H2Q1 129 aa8.5□□□□□ -1.05
CLIP1-202ENST00000358808 SAA2-SAA4A0A096LPE2 208 aa8.5□□□□□ -1.05
CLIP1-202ENST00000358808 SAA2P0DJI9 122 aaPredicted RBP8.5□□□□□ -1.05
CLIP1-202ENST00000358808 WFDC6Q9BQY6 131 aa8.5□□□□□ -1.05
CLIP1-202ENST00000358808 GGTLC1Q9BX51 225 aa8.5□□□□□ -1.05
CLIP1-202ENST00000358808 CCDC88CQ9P219 2028 aa8.5□□□□□ -1.05
CLIP1-202ENST00000358808 MDC1Q14676 2089 aaKnown RBP8.49□□□□□ -1.05
CLIP1-202ENST00000358808 TMEM238C9JI98 176 aa8.49□□□□□ -1.05
CLIP1-202ENST00000358808 H3BMM0 161 aa8.49□□□□□ -1.05
CLIP1-202ENST00000358808 DEFB130BP0DP73 79 aa8.49□□□□□ -1.05
CLIP1-202ENST00000358808 DEFB130AP0DP74 79 aa8.49□□□□□ -1.05
CLIP1-202ENST00000358808 CACNG8Q8WXS5 425 aa8.49□□□□□ -1.05
CLIP1-202ENST00000358808 UBE2WQ96B02 151 aa8.49□□□□□ -1.05
CLIP1-202ENST00000358808 CEP250Q9BV73 2442 aa8.49□□□□□ -1.05
CLIP1-202ENST00000358808 LCNL1Q6ZST4 164 aa8.49□□□□□ -1.05
CLIP1-202ENST00000358808 ZNF561-AS1K7EIQ3 104 aa8.49□□□□□ -1.05
CLIP1-202ENST00000358808 ZNF362Q5T0B9 420 aaPredicted RBP8.49□□□□□ -1.05
CLIP1-202ENST00000358808 TEX43Q6ZNM6 134 aa8.49□□□□□ -1.05
CLIP1-202ENST00000358808 GREM1O60565 184 aa8.49□□□□□ -1.05
CLIP1-202ENST00000358808 CTSBP07858 339 aa8.49□□□□□ -1.05
CLIP1-202ENST00000358808 H2BFSP57053 126 aa8.49□□□□□ -1.05
CLIP1-202ENST00000358808 ANXA2RQ3ZCQ2 193 aa8.49□□□□□ -1.05
CLIP1-202ENST00000358808 ATP5L2Q7Z4Y8 100 aa8.49□□□□□ -1.05
CLIP1-202ENST00000358808 NKAPP1Q8N9T2 125 aa8.49□□□□□ -1.05
CLIP1-202ENST00000358808 LEPROTO15243 131 aa8.49□□□□□ -1.05
CLIP1-202ENST00000358808 CSRP1P21291 193 aaKnown RBP8.49□□□□□ -1.05
CLIP1-202ENST00000358808 C9orf106Q8NAJ2 232 aa8.49□□□□□ -1.05
CLIP1-202ENST00000358808 NRN1Q9NPD7 142 aa8.49□□□□□ -1.05
CLIP1-202ENST00000358808 PSG8Q9UQ74 426 aa8.49□□□□□ -1.05
CLIP1-202ENST00000358808 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.48□□□□□ -1.05
CLIP1-202ENST00000358808 TIMM23O14925 209 aa8.48□□□□□ -1.05
CLIP1-202ENST00000358808 VMO1Q7Z5L0 202 aa8.48□□□□□ -1.05
CLIP1-202ENST00000358808 C1orf159Q96HA4 380 aa8.48□□□□□ -1.05
CLIP1-202ENST00000358808 RCC1LQ96I51 464 aaKnown RBP8.48□□□□□ -1.05
CLIP1-202ENST00000358808 WISP3O95389 354 aaPredicted RBP8.48□□□□□ -1.05
CLIP1-202ENST00000358808 ESDP10768 282 aa8.48□□□□□ -1.05
CLIP1-202ENST00000358808 PRCDQ00LT1 54 aa8.48□□□□□ -1.05
CLIP1-202ENST00000358808 C1QTNF4Q9BXJ3 329 aa8.48□□□□□ -1.05
CLIP1-202ENST00000358808 UPK2O00526 184 aa8.48□□□□□ -1.05
CLIP1-202ENST00000358808 CELA3BP08861 270 aa8.48□□□□□ -1.05
CLIP1-202ENST00000358808 DMRTA1Q5VZB9 504 aa8.48□□□□□ -1.05
CLIP1-202ENST00000358808 ZNF474Q6S9Z5 364 aaPredicted RBP8.48□□□□□ -1.05
CLIP1-202ENST00000358808 IGHMP01871 453 aa8.48□□□□□ -1.05
CLIP1-202ENST00000358808 FAM90A1Q86YD7 464 aa8.48□□□□□ -1.05
CLIP1-202ENST00000358808 RNASE7Q9H1E1 156 aaKnown RBP8.48□□□□□ -1.05
CLIP1-202ENST00000358808 TRBV5-7A0A0A0MS05 114 aa8.47□□□□□ -1.05
CLIP1-202ENST00000358808 NDUFS5O43920 106 aa8.47□□□□□ -1.05
CLIP1-202ENST00000358808 PRTN3P24158 256 aa8.47□□□□□ -1.05
CLIP1-202ENST00000358808 GATA4P43694 442 aa8.47□□□□□ -1.05
CLIP1-202ENST00000358808 LIMS1P48059 325 aa8.47□□□□□ -1.05
CLIP1-202ENST00000358808 PTPRFP10586 1907 aa8.47□□□□□ -1.05
CLIP1-202ENST00000358808 NPIPB13A6NJU9 1138 aa8.47□□□□□ -1.05
CLIP1-202ENST00000358808 NPIPB5A8MRT5 1133 aa8.47□□□□□ -1.05
CLIP1-202ENST00000358808 TNFRSF6BO95407 300 aa8.47□□□□□ -1.05
CLIP1-202ENST00000358808 E9PQ18 207 aa8.47□□□□□ -1.05
CLIP1-202ENST00000358808 GNLYP22749 145 aa8.47□□□□□ -1.05
CLIP1-202ENST00000358808 FUT5Q11128 374 aa8.47□□□□□ -1.05
CLIP1-202ENST00000358808 EIF4EBP2Q13542 120 aaPredicted RBP8.47□□□□□ -1.05
CLIP1-202ENST00000358808 DNAJC30Q96LL9 226 aa8.47□□□□□ -1.05
CLIP1-202ENST00000358808 TRAV13-1A0A0B4J241 112 aa8.47□□□□□ -1.05
CLIP1-202ENST00000358808 F5H768 121 aa8.47□□□□□ -1.05
CLIP1-202ENST00000358808 LSM4Q9Y4Z0 139 aaKnown RBP8.47□□□□□ -1.05
CLIP1-202ENST00000358808 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.47□□□□□ -1.05
CLIP1-202ENST00000358808 LAGE3Q14657 143 aa8.47□□□□□ -1.05
CLIP1-202ENST00000358808 ZCCHC24Q8N2G6 241 aaKnown RBP8.47□□□□□ -1.05
CLIP1-202ENST00000358808 DIDO1Q9BTC0 2240 aaKnown RBP8.46□□□□□ -1.05
CLIP1-202ENST00000358808 C15orf61A6NNL5 157 aa8.46□□□□□ -1.05
CLIP1-202ENST00000358808 PSG7Q13046 419 aa8.46□□□□□ -1.05
CLIP1-202ENST00000358808 OVOL2Q9BRP0 275 aa8.46□□□□□ -1.05
CLIP1-202ENST00000358808 EPDR1Q9UM22 224 aa8.46□□□□□ -1.05
CLIP1-202ENST00000358808 IGKV2-40A0A087WW87 121 aaPredicted RBP8.46□□□□□ -1.05
CLIP1-202ENST00000358808 IGKV2D-40P01614 121 aaPredicted RBP8.46□□□□□ -1.05
CLIP1-202ENST00000358808 F2Z2F3 143 aa8.46□□□□□ -1.06
CLIP1-202ENST00000358808 PIN1P1O15428 100 aa8.46□□□□□ -1.06
CLIP1-202ENST00000358808 PYYP10082 97 aa8.46□□□□□ -1.06
CLIP1-202ENST00000358808 ZNF708P17019 499 aa8.46□□□□□ -1.06
CLIP1-202ENST00000358808 NHLRC3Q5JS37 347 aa8.46□□□□□ -1.06
CLIP1-202ENST00000358808 LAIR2Q6ISS4 152 aa8.46□□□□□ -1.06
CLIP1-202ENST00000358808 PLEKHB2Q96CS7 222 aa8.46□□□□□ -1.06
CLIP1-202ENST00000358808 IQCF6A8MYZ5 107 aa8.46□□□□□ -1.06
CLIP1-202ENST00000358808 RASL11AQ6T310 242 aa8.46□□□□□ -1.06
CLIP1-202ENST00000358808 LHFPL4Q7Z7J7 247 aa8.46□□□□□ -1.06
CLIP1-202ENST00000358808 SPACA3Q8IXA5 215 aa8.46□□□□□ -1.06
CLIP1-202ENST00000358808 PIP4P2Q8N4L2 257 aa8.46□□□□□ -1.06
CLIP1-202ENST00000358808 A0A0G2JMM0 328 aa8.46□□□□□ -1.06
CLIP1-202ENST00000358808 A0A1W2PPB8 328 aa8.46□□□□□ -1.06
CLIP1-202ENST00000358808 A0A1W2PRS3 328 aa8.46□□□□□ -1.06
CLIP1-202ENST00000358808 KIR3DP1A8MWS1 328 aa8.46□□□□□ -1.06
CLIP1-202ENST00000358808 C22orf46C9J442 243 aa8.46□□□□□ -1.06
CLIP1-202ENST00000358808 PSG1P11464 419 aa8.46□□□□□ -1.06
CLIP1-202ENST00000358808 OCIAD2Q56VL3 154 aa8.46□□□□□ -1.06
CLIP1-202ENST00000358808 C1orf122Q6ZSJ8 110 aa8.46□□□□□ -1.06
CLIP1-202ENST00000358808 DMRT1Q9Y5R6 373 aa8.46□□□□□ -1.06
CLIP1-202ENST00000358808 COX11Q9Y6N1 276 aa8.46□□□□□ -1.06
CLIP1-202ENST00000358808 CD5P06127 495 aa8.45□□□□□ -1.06
CLIP1-202ENST00000358808 RPL15P61313 204 aaKnown RBP8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms