RNA–Protein interactions for RNA: ENST00000358528.8

CSDE1-203, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDE1, Length 4,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-203ENST00000358528 PRR7Q8TB68 274 aa5.37□□□□□ -1.55
CSDE1-203ENST00000358528 SLC25A33Q9BSK2 321 aa5.37□□□□□ -1.55
CSDE1-203ENST00000358528 COL6A6A6NMZ7 2263 aa5.37□□□□□ -1.55
CSDE1-203ENST00000358528 TRAV9-1A0A075B6T8 112 aa5.37□□□□□ -1.55
CSDE1-203ENST00000358528 TRAV8-1A0A0A6YYK1 113 aa5.37□□□□□ -1.55
CSDE1-203ENST00000358528 SRRM4A7MD48 611 aaKnown RBP5.37□□□□□ -1.55
CSDE1-203ENST00000358528 NDUFB3O43676 98 aa5.37□□□□□ -1.55
CSDE1-203ENST00000358528 IGLC2P0DOY2 106 aa5.37□□□□□ -1.55
CSDE1-203ENST00000358528 IGLC3P0DOY3 106 aa5.37□□□□□ -1.55
CSDE1-203ENST00000358528 SELENOTP62341 195 aa5.37□□□□□ -1.55
CSDE1-203ENST00000358528 PRCDQ00LT1 54 aa5.37□□□□□ -1.55
CSDE1-203ENST00000358528 CD69Q07108 199 aa5.37□□□□□ -1.55
CSDE1-203ENST00000358528 Q0VG73 95 aa5.37□□□□□ -1.55
CSDE1-203ENST00000358528 HES1Q14469 280 aa5.37□□□□□ -1.55
CSDE1-203ENST00000358528 NIT1Q86X76 327 aa5.37□□□□□ -1.55
CSDE1-203ENST00000358528 MUC15Q8N387 334 aa5.37□□□□□ -1.55
CSDE1-203ENST00000358528 C18orf32Q8TCD1 76 aa5.37□□□□□ -1.55
CSDE1-203ENST00000358528 TMEM70Q9BUB7 260 aa5.37□□□□□ -1.55
CSDE1-203ENST00000358528 TMEM191AQ9H0A3 160 aa5.37□□□□□ -1.55
CSDE1-203ENST00000358528 GAL3ST2Q9H3Q3 398 aa5.37□□□□□ -1.55
CSDE1-203ENST00000358528 OR5AL1P0C617 328 aa5.37□□□□□ -1.55
CSDE1-203ENST00000358528 TSPOP30536 169 aa5.37□□□□□ -1.55
CSDE1-203ENST00000358528 PPOXP50336 477 aa5.37□□□□□ -1.55
CSDE1-203ENST00000358528 NHLH1Q02575 133 aa5.37□□□□□ -1.55
CSDE1-203ENST00000358528 TRIP6Q15654 476 aaKnown RBP5.37□□□□□ -1.55
CSDE1-203ENST00000358528 OR10J3Q5JRS4 329 aa5.37□□□□□ -1.55
CSDE1-203ENST00000358528 C1orf229Q6ZS94 237 aaPredicted RBP5.37□□□□□ -1.55
CSDE1-203ENST00000358528 FAM222BQ8WU58 562 aa5.37□□□□□ -1.55
CSDE1-203ENST00000358528 ZFHX2Q9C0A1 2572 aaPredicted RBP5.36□□□□□ -1.55
CSDE1-203ENST00000358528 A0A1B0GWJ7 208 aa5.36□□□□□ -1.55
CSDE1-203ENST00000358528 A0A1W2PNU3 283 aaPredicted RBP5.36□□□□□ -1.55
CSDE1-203ENST00000358528 A8MWL6 223 aa5.36□□□□□ -1.55
CSDE1-203ENST00000358528 NBEAP1P0C6P0 100 aa5.36□□□□□ -1.55
CSDE1-203ENST00000358528 GOLT1AQ6ZVE7 132 aa5.36□□□□□ -1.55
CSDE1-203ENST00000358528 PERPQ96FX8 193 aa5.36□□□□□ -1.55
CSDE1-203ENST00000358528 SFXN3Q9BWM7 321 aa5.36□□□□□ -1.55
CSDE1-203ENST00000358528 MAP1LC3CQ9BXW4 147 aa5.36□□□□□ -1.55
CSDE1-203ENST00000358528 FOXA2Q9Y261 457 aaPredicted RBP5.36□□□□□ -1.55
CSDE1-203ENST00000358528 IGKV1OR2-108A0A075B7D4 117 aa5.36□□□□□ -1.55
CSDE1-203ENST00000358528 A0A1W2PRE2 83 aa5.36□□□□□ -1.55
CSDE1-203ENST00000358528 FAM181BA6NEQ2 426 aa5.36□□□□□ -1.55
CSDE1-203ENST00000358528 VSTM5A8MXK1 200 aa5.36□□□□□ -1.55
CSDE1-203ENST00000358528 IGKV3-15P01624 115 aa5.36□□□□□ -1.55
CSDE1-203ENST00000358528 MPV17L2Q567V2 206 aa5.36□□□□□ -1.55
CSDE1-203ENST00000358528 RPRMLQ8N4K4 120 aa5.36□□□□□ -1.55
CSDE1-203ENST00000358528 ZNF714Q96N38 554 aa5.36□□□□□ -1.55
CSDE1-203ENST00000358528 ALKBH7Q9BT30 221 aaPredicted RBP5.36□□□□□ -1.55
CSDE1-203ENST00000358528 TRAV9-2A0A087WT02 112 aa5.36□□□□□ -1.55
CSDE1-203ENST00000358528 FAM87AP0C7U9 286 aa5.36□□□□□ -1.55
CSDE1-203ENST00000358528 TNFRSF1AP19438 455 aa5.36□□□□□ -1.55
CSDE1-203ENST00000358528 LOXL3P58215 753 aa5.36□□□□□ -1.55
CSDE1-203ENST00000358528 LINC00310P59036 64 aa5.36□□□□□ -1.55
CSDE1-203ENST00000358528 HBBP68871 147 aa5.36□□□□□ -1.55
CSDE1-203ENST00000358528 LRRC10Q5BKY1 277 aa5.36□□□□□ -1.55
CSDE1-203ENST00000358528 SRSF12Q8WXF0 261 aaKnown RBP5.36□□□□□ -1.55
CSDE1-203ENST00000358528 GRAMD2BQ96HH9 432 aa5.36□□□□□ -1.55
CSDE1-203ENST00000358528 NAA38Q9BRA0 125 aaKnown RBP5.36□□□□□ -1.55
CSDE1-203ENST00000358528 COLQQ9Y215 455 aaPredicted RBP5.36□□□□□ -1.55
CSDE1-203ENST00000358528 LSM4Q9Y4Z0 139 aaKnown RBP5.36□□□□□ -1.55
CSDE1-203ENST00000358528 TRGV8A0A0C4DH27 118 aa5.35□□□□□ -1.55
CSDE1-203ENST00000358528 ZNF891A8MT65 544 aaPredicted RBP5.35□□□□□ -1.55
CSDE1-203ENST00000358528 CT45A10P0DMU9 189 aa5.35□□□□□ -1.55
CSDE1-203ENST00000358528 SFTPCP11686 197 aa5.35□□□□□ -1.55
CSDE1-203ENST00000358528 FXYD7P58549 80 aa5.35□□□□□ -1.55
CSDE1-203ENST00000358528 COTL1Q14019 142 aa5.35□□□□□ -1.55
CSDE1-203ENST00000358528 SLC25A34Q6PIV7 304 aa5.35□□□□□ -1.55
CSDE1-203ENST00000358528 WFDC3Q8IUB2 231 aa5.35□□□□□ -1.55
CSDE1-203ENST00000358528 Q8N7P7 452 aa5.35□□□□□ -1.55
CSDE1-203ENST00000358528 RAB37Q96AX2 223 aa5.35□□□□□ -1.55
CSDE1-203ENST00000358528 TMEM14BQ9NUH8 114 aa5.35□□□□□ -1.55
CSDE1-203ENST00000358528 LINC00614P0C842 121 aa5.35□□□□□ -1.55
CSDE1-203ENST00000358528 RNASE2P10153 161 aaKnown RBP5.35□□□□□ -1.55
CSDE1-203ENST00000358528 IGLL1P15814 213 aa5.35□□□□□ -1.55
CSDE1-203ENST00000358528 PRR20EP86478 221 aa5.35□□□□□ -1.55
CSDE1-203ENST00000358528 PRR20CP86479 221 aa5.35□□□□□ -1.55
CSDE1-203ENST00000358528 PRR20DP86480 221 aa5.35□□□□□ -1.55
CSDE1-203ENST00000358528 PRR20BP86481 221 aa5.35□□□□□ -1.55
CSDE1-203ENST00000358528 PRR20AP86496 221 aa5.35□□□□□ -1.55
CSDE1-203ENST00000358528 DIAPH2-AS1Q14236 149 aa5.35□□□□□ -1.55
CSDE1-203ENST00000358528 C17orf58Q2M2W7 97 aa5.35□□□□□ -1.55
CSDE1-203ENST00000358528 SPACA3Q8IXA5 215 aa5.35□□□□□ -1.55
CSDE1-203ENST00000358528 VSTM2AQ8TAG5 236 aa5.35□□□□□ -1.55
CSDE1-203ENST00000358528 TECTAO75443 2155 aa5.35□□□□□ -1.55
CSDE1-203ENST00000358528 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP5.35□□□□□ -1.55
CSDE1-203ENST00000358528 GLRXP35754 106 aa5.35□□□□□ -1.55
CSDE1-203ENST00000358528 MSMPQ1L6U9 139 aa5.35□□□□□ -1.55
CSDE1-203ENST00000358528 FBLN7Q53RD9 439 aa5.35□□□□□ -1.55
CSDE1-203ENST00000358528 TMEM116Q8NCL8 245 aa5.35□□□□□ -1.55
CSDE1-203ENST00000358528 NEUROG1Q92886 237 aa5.35□□□□□ -1.55
CSDE1-203ENST00000358528 TNRC6AQ8NDV7 1962 aaKnown RBP5.35□□□□□ -1.55
CSDE1-203ENST00000358528 TET2Q6N021 2002 aaPredicted RBP5.35□□□□□ -1.55
CSDE1-203ENST00000358528 IGHV3-35A0A0C4DH35 117 aa5.34□□□□□ -1.55
CSDE1-203ENST00000358528 FAM90A9PA6NNJ1 464 aa5.34□□□□□ -1.55
CSDE1-203ENST00000358528 RPL27AP46776 148 aaKnown RBP5.34□□□□□ -1.55
CSDE1-203ENST00000358528 LDLRAD2Q5SZI1 272 aa5.34□□□□□ -1.55
CSDE1-203ENST00000358528 CIARTQ8N365 385 aaPredicted RBP5.34□□□□□ -1.55
CSDE1-203ENST00000358528 OR4C13Q8NGP0 309 aa5.34□□□□□ -1.55
CSDE1-203ENST00000358528 C11orf52Q96A22 123 aa5.34□□□□□ -1.55
CSDE1-203ENST00000358528 LOXL4Q96JB6 756 aa5.34□□□□□ -1.55
CSDE1-203ENST00000358528 MRPL32Q9BYC8 188 aaKnown RBP5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms