RNA–Protein interactions for RNA: ENST00000358511.10

COL6A6-201, Transcript of collagen type VI alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A6, Length 9,581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-201ENST00000358511 PLA2G2FQ9BZM2 168 aa7.38□□□□□ -1.23
COL6A6-201ENST00000358511 SYS1-DBNDD2H3BUS1 97 aa7.38□□□□□ -1.23
COL6A6-201ENST00000358511 CD5LO43866 347 aa7.38□□□□□ -1.23
COL6A6-201ENST00000358511 VKORC1Q9BQB6 163 aa7.38□□□□□ -1.23
COL6A6-201ENST00000358511 hCG_38984A0A1B0GV85 526 aa7.38□□□□□ -1.23
COL6A6-201ENST00000358511 COL9A1P20849 921 aa7.38□□□□□ -1.23
COL6A6-201ENST00000358511 PLSCR4Q9NRQ2 329 aa7.38□□□□□ -1.23
COL6A6-201ENST00000358511 ID3Q02535 119 aa7.38□□□□□ -1.23
COL6A6-201ENST00000358511 EFNB3Q15768 340 aa7.38□□□□□ -1.23
COL6A6-201ENST00000358511 RPL39P5Q59GN2 51 aa7.38□□□□□ -1.23
COL6A6-201ENST00000358511 IFI27L1Q96BM0 104 aa7.38□□□□□ -1.23
COL6A6-201ENST00000358511 CCL13Q99616 98 aa7.38□□□□□ -1.23
COL6A6-201ENST00000358511 IGHV1OR15-9A0A0B4J2B8 117 aa7.38□□□□□ -1.23
COL6A6-201ENST00000358511 ZNF826PQ6ZT77 177 aa7.38□□□□□ -1.23
COL6A6-201ENST00000358511 DEFB123Q8N688 67 aa7.38□□□□□ -1.23
COL6A6-201ENST00000358511 GREM1O60565 184 aa7.38□□□□□ -1.23
COL6A6-201ENST00000358511 CD3EP07766 207 aa7.38□□□□□ -1.23
COL6A6-201ENST00000358511 TRAV24A0A0B4J272 114 aa7.38□□□□□ -1.23
COL6A6-201ENST00000358511 C3AR1Q16581 482 aa7.38□□□□□ -1.23
COL6A6-201ENST00000358511 OSR1Q8TAX0 266 aaPredicted RBP7.38□□□□□ -1.23
COL6A6-201ENST00000358511 LOC105371242A0A075B767 164 aa7.37□□□□□ -1.23
COL6A6-201ENST00000358511 PPIAL4CA0A0B4J2A2 164 aa7.37□□□□□ -1.23
COL6A6-201ENST00000358511 C2CD4DB7Z1M9 353 aa7.37□□□□□ -1.23
COL6A6-201ENST00000358511 PPIAL4GP0DN37 164 aa7.37□□□□□ -1.23
COL6A6-201ENST00000358511 C17orf98A8MV24 154 aa7.37□□□□□ -1.23
COL6A6-201ENST00000358511 ORMDL2Q53FV1 153 aa7.37□□□□□ -1.23
COL6A6-201ENST00000358511 C9orf50Q5SZB4 431 aa7.37□□□□□ -1.23
COL6A6-201ENST00000358511 PMS2CLQ68D20 193 aa7.37□□□□□ -1.23
COL6A6-201ENST00000358511 CCL1P22362 96 aa7.37□□□□□ -1.23
COL6A6-201ENST00000358511 SRSF1Q07955 248 aaKnown RBP eCLIP7.37□□□□□ -1.23
COL6A6-201ENST00000358511 DEFB121Q5J5C9 76 aa7.37□□□□□ -1.23
COL6A6-201ENST00000358511 LHFPL1Q86WI0 220 aa7.37□□□□□ -1.23
COL6A6-201ENST00000358511 BCL6BQ8N143 479 aaPredicted RBP7.37□□□□□ -1.23
COL6A6-201ENST00000358511 FAM89BQ8N5H3 189 aa7.37□□□□□ -1.23
COL6A6-201ENST00000358511 DUX5Q96PT3 197 aa7.37□□□□□ -1.23
COL6A6-201ENST00000358511 FSCN3Q9NQT6 498 aa7.37□□□□□ -1.23
COL6A6-201ENST00000358511 IGHV3-48P01763 117 aa7.37□□□□□ -1.23
COL6A6-201ENST00000358511 FAM106CPP0CH98 169 aa7.37□□□□□ -1.23
COL6A6-201ENST00000358511 ZNF562Q6V9R5 426 aa7.37□□□□□ -1.23
COL6A6-201ENST00000358511 RNF182Q8N6D2 247 aa7.37□□□□□ -1.23
COL6A6-201ENST00000358511 OTORQ9NRC9 128 aa7.37□□□□□ -1.23
COL6A6-201ENST00000358511 TMEM144Q7Z5S9 345 aa7.37□□□□□ -1.23
COL6A6-201ENST00000358511 SPG11Q96JI7 2443 aa7.37□□□□□ -1.23
COL6A6-201ENST00000358511 C15orf61A6NNL5 157 aa7.37□□□□□ -1.23
COL6A6-201ENST00000358511 IGLV3-21P80748 117 aaPredicted RBP7.37□□□□□ -1.23
COL6A6-201ENST00000358511 MESP1Q9BRJ9 268 aa7.37□□□□□ -1.23
COL6A6-201ENST00000358511 TTTY12Q9BZ98 90 aa7.37□□□□□ -1.23
COL6A6-201ENST00000358511 LY96Q9Y6Y9 160 aa7.37□□□□□ -1.23
COL6A6-201ENST00000358511 CD55P08174 381 aa7.37□□□□□ -1.23
COL6A6-201ENST00000358511 TDGF1P13385 188 aa7.37□□□□□ -1.23
COL6A6-201ENST00000358511 NRN1LQ496H8 165 aa7.37□□□□□ -1.23
COL6A6-201ENST00000358511 ADAMTSL5Q6ZMM2 481 aa7.37□□□□□ -1.23
COL6A6-201ENST00000358511 TNFRSF14Q92956 283 aa7.37□□□□□ -1.23
COL6A6-201ENST00000358511 NPIPB11E5RHQ5 1161 aa7.37□□□□□ -1.23
COL6A6-201ENST00000358511 C3orf79P0CE67 100 aa7.37□□□□□ -1.23
COL6A6-201ENST00000358511 TMPRSS3P57727 454 aa7.37□□□□□ -1.23
COL6A6-201ENST00000358511 KLF14Q8TD94 323 aaPredicted RBP7.37□□□□□ -1.23
COL6A6-201ENST00000358511 NOTCH4Q99466 2003 aa7.36□□□□□ -1.23
COL6A6-201ENST00000358511 M0R381 172 aa7.36□□□□□ -1.23
COL6A6-201ENST00000358511 CFAP161Q6P656 301 aa7.36□□□□□ -1.23
COL6A6-201ENST00000358511 FAM159AQ6UWV7 190 aa7.36□□□□□ -1.23
COL6A6-201ENST00000358511 SRSF7Q16629 238 aaKnown RBP eCLIP7.36□□□□□ -1.23
COL6A6-201ENST00000358511 FGF11Q92914 225 aa7.36□□□□□ -1.23
COL6A6-201ENST00000358511 LCN12Q6JVE5 192 aa7.36□□□□□ -1.23
COL6A6-201ENST00000358511 TEX45Q8NA69 505 aa7.36□□□□□ -1.23
COL6A6-201ENST00000358511 RAX2Q96IS3 184 aa7.36□□□□□ -1.23
COL6A6-201ENST00000358511 EXPH5Q8NEV8 1989 aa7.36□□□□□ -1.23
COL6A6-201ENST00000358511 OR9G9P0C7N8 305 aa7.36□□□□□ -1.23
COL6A6-201ENST00000358511 SRSF6Q13247 344 aaKnown RBP7.36□□□□□ -1.23
COL6A6-201ENST00000358511 ACP7Q6ZNF0 438 aa7.36□□□□□ -1.23
COL6A6-201ENST00000358511 RSPO3Q9BXY4 272 aaPredicted RBP7.36□□□□□ -1.23
COL6A6-201ENST00000358511 TOMM7Q9P0U1 55 aa7.36□□□□□ -1.23
COL6A6-201ENST00000358511 TRAV12-3A0A0B4J271 114 aa7.36□□□□□ -1.23
COL6A6-201ENST00000358511 hDV102S1A0JD36 115 aa7.36□□□□□ -1.23
COL6A6-201ENST00000358511 NAPSAO96009 420 aa7.36□□□□□ -1.23
COL6A6-201ENST00000358511 KIR3DL3Q8N743 410 aa7.36□□□□□ -1.23
COL6A6-201ENST00000358511 MRAPQ8TCY5 172 aa7.36□□□□□ -1.23
COL6A6-201ENST00000358511 LEAP2Q969E1 77 aa7.36□□□□□ -1.23
COL6A6-201ENST00000358511 EPDR1Q9UM22 224 aa7.36□□□□□ -1.23
COL6A6-201ENST00000358511 A0A087WV48 116 aa7.36□□□□□ -1.23
COL6A6-201ENST00000358511 TRBV7-9A0A0J9YWB2 115 aa7.36□□□□□ -1.23
COL6A6-201ENST00000358511 ASIPP42127 132 aa7.36□□□□□ -1.23
COL6A6-201ENST00000358511 PAQR4Q8N4S7 273 aaPredicted RBP7.36□□□□□ -1.23
COL6A6-201ENST00000358511 ATP6V0BQ99437 205 aa7.36□□□□□ -1.23
COL6A6-201ENST00000358511 IGHV1-45A0A0A0MS14 117 aa7.35□□□□□ -1.23
COL6A6-201ENST00000358511 A0A0A6YYD4 124 aa7.35□□□□□ -1.23
COL6A6-201ENST00000358511 C12orf77C9JDV5 145 aa7.35□□□□□ -1.23
COL6A6-201ENST00000358511 CDKN1AP38936 164 aa7.35□□□□□ -1.23
COL6A6-201ENST00000358511 SSBP2P81877 361 aaPredicted RBP7.35□□□□□ -1.23
COL6A6-201ENST00000358511 CLEC2AQ6UVW9 174 aa7.35□□□□□ -1.23
COL6A6-201ENST00000358511 YAE1D1Q9NRH1 226 aa7.35□□□□□ -1.23
COL6A6-201ENST00000358511 LINC01565O15544 149 aa7.35□□□□□ -1.23
COL6A6-201ENST00000358511 CDKN1BP46527 198 aa7.35□□□□□ -1.23
COL6A6-201ENST00000358511 LAGE3Q14657 143 aa7.35□□□□□ -1.23
COL6A6-201ENST00000358511 ATG2AQ2TAZ0 1938 aa7.35□□□□□ -1.23
COL6A6-201ENST00000358511 KIAA1671Q9BY89 1806 aa7.35□□□□□ -1.23
COL6A6-201ENST00000358511 TM4SF5O14894 197 aa7.35□□□□□ -1.23
COL6A6-201ENST00000358511 NPFFO15130 113 aa7.35□□□□□ -1.23
COL6A6-201ENST00000358511 TMEM155Q4W5P6 130 aa7.35□□□□□ -1.23
COL6A6-201ENST00000358511 FAM90A2PQ658T7 463 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms