RNA–Protein interactions for RNA: ENST00000357654.7

BRCA1-203, Transcript of BRCA1, DNA repair associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRCA1, Length 7,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-203ENST00000357654 SUPT4H1P63272 117 aaKnown RBP4.82□□□□□ -1.64
BRCA1-203ENST00000357654 FOXL1Q12952 345 aa4.82□□□□□ -1.64
BRCA1-203ENST00000357654 UQCR10Q9UDW1 63 aa4.82□□□□□ -1.64
BRCA1-203ENST00000357654 MYO18AQ92614 2054 aaKnown RBP4.82□□□□□ -1.64
BRCA1-203ENST00000357654 NUP188Q5SRE5 1749 aa4.82□□□□□ -1.64
BRCA1-203ENST00000357654 ATG2BQ96BY7 2078 aa4.82□□□□□ -1.64
BRCA1-203ENST00000357654 A8MXK9 166 aa4.82□□□□□ -1.64
BRCA1-203ENST00000357654 MST1LQ2TV78 715 aa4.82□□□□□ -1.64
BRCA1-203ENST00000357654 CASC2Q6XLA1 102 aa4.82□□□□□ -1.64
BRCA1-203ENST00000357654 DSCR8Q96T75 97 aa4.82□□□□□ -1.64
BRCA1-203ENST00000357654 MEGF9Q9H1U4 602 aa4.82□□□□□ -1.64
BRCA1-203ENST00000357654 CCDC88AQ3V6T2 1871 aa4.81□□□□□ -1.64
BRCA1-203ENST00000357654 FOXS1O43638 330 aa4.81□□□□□ -1.64
BRCA1-203ENST00000357654 AGAP20933 346 aa4.81□□□□□ -1.64
BRCA1-203ENST00000357654 MPV17L2Q567V2 206 aa4.81□□□□□ -1.64
BRCA1-203ENST00000357654 SHISA4Q96DD7 197 aa4.81□□□□□ -1.64
BRCA1-203ENST00000357654 TMEM133Q9H2Q1 129 aa4.81□□□□□ -1.64
BRCA1-203ENST00000357654 UBE2D4Q9Y2X8 147 aa4.81□□□□□ -1.64
BRCA1-203ENST00000357654 SAA2-SAA4A0A096LPE2 208 aa4.81□□□□□ -1.64
BRCA1-203ENST00000357654 DPRXA6NFQ7 191 aa4.81□□□□□ -1.64
BRCA1-203ENST00000357654 BUB3O43684 328 aa4.81□□□□□ -1.64
BRCA1-203ENST00000357654 CRYGCP07315 174 aa4.81□□□□□ -1.64
BRCA1-203ENST00000357654 SAA2P0DJI9 122 aaPredicted RBP4.81□□□□□ -1.64
BRCA1-203ENST00000357654 SPINK13Q1W4C9 94 aa4.81□□□□□ -1.64
BRCA1-203ENST00000357654 ZNF600Q6ZNG1 722 aa4.81□□□□□ -1.64
BRCA1-203ENST00000357654 DNAJC30Q96LL9 226 aa4.81□□□□□ -1.64
BRCA1-203ENST00000357654 SPATA25Q9BR10 227 aa4.81□□□□□ -1.64
BRCA1-203ENST00000357654 RSPO3Q9BXY4 272 aaPredicted RBP4.81□□□□□ -1.64
BRCA1-203ENST00000357654 TRAV12-2A0A075B6T6 113 aa4.81□□□□□ -1.64
BRCA1-203ENST00000357654 LINC00587B1AMM8 73 aa4.81□□□□□ -1.64
BRCA1-203ENST00000357654 NBL1P41271 181 aa4.81□□□□□ -1.64
BRCA1-203ENST00000357654 UBE2D1P51668 147 aa4.81□□□□□ -1.64
BRCA1-203ENST00000357654 C9orf47Q6ZRZ4 202 aa4.81□□□□□ -1.64
BRCA1-203ENST00000357654 H1FOOQ8IZA3 346 aaPredicted RBP4.81□□□□□ -1.64
BRCA1-203ENST00000357654 A0A1B0GUL6 1792 aa4.81□□□□□ -1.64
BRCA1-203ENST00000357654 PHIPQ8WWQ0 1821 aa4.81□□□□□ -1.64
BRCA1-203ENST00000357654 IGHV4OR15-8A0A075B7B6 117 aa4.81□□□□□ -1.64
BRCA1-203ENST00000357654 A0A087WW49 117 aa4.81□□□□□ -1.64
BRCA1-203ENST00000357654 TINCRA0A1B0GVN0 87 aa4.81□□□□□ -1.64
BRCA1-203ENST00000357654 E9PLN8 166 aa4.81□□□□□ -1.64
BRCA1-203ENST00000357654 ZNF250P15622 560 aa4.81□□□□□ -1.64
BRCA1-203ENST00000357654 XCL1P47992 114 aa4.81□□□□□ -1.64
BRCA1-203ENST00000357654 C12orf73Q69YU5 71 aa4.81□□□□□ -1.64
BRCA1-203ENST00000357654 LRP5O75197 1615 aa4.81□□□□□ -1.64
BRCA1-203ENST00000357654 FAM90A20PA6NIJ5 464 aa4.81□□□□□ -1.64
BRCA1-203ENST00000357654 RHODO00212 210 aa4.81□□□□□ -1.64
BRCA1-203ENST00000357654 VCYO14598 125 aa4.81□□□□□ -1.64
BRCA1-203ENST00000357654 SERF1AO75920 110 aa4.81□□□□□ -1.64
BRCA1-203ENST00000357654 KLF17Q5JT82 389 aaPredicted RBP4.81□□□□□ -1.64
BRCA1-203ENST00000357654 C2orf82Q6UX34 121 aa4.81□□□□□ -1.64
BRCA1-203ENST00000357654 C17orf77Q96MU5 243 aa4.81□□□□□ -1.64
BRCA1-203ENST00000357654 CSTL1Q9H114 145 aa4.81□□□□□ -1.64
BRCA1-203ENST00000357654 DNAJC13O75165 2243 aa4.81□□□□□ -1.64
BRCA1-203ENST00000357654 ETDCA0A1B0GVM5 59 aa4.8□□□□□ -1.64
BRCA1-203ENST00000357654 DPM2O94777 84 aa4.8□□□□□ -1.64
BRCA1-203ENST00000357654 IGKCP01834 107 aa4.8□□□□□ -1.64
BRCA1-203ENST00000357654 PYYP10082 97 aa4.8□□□□□ -1.64
BRCA1-203ENST00000357654 RPL23P62829 140 aaKnown RBP4.8□□□□□ -1.64
BRCA1-203ENST00000357654 ATP5L2Q7Z4Y8 100 aa4.8□□□□□ -1.64
BRCA1-203ENST00000357654 APCDD1LQ8NCL9 501 aa4.8□□□□□ -1.64
BRCA1-203ENST00000357654 IFT22Q9H7X7 185 aa4.8□□□□□ -1.64
BRCA1-203ENST00000357654 SLX4Q8IY92 1834 aa4.8□□□□□ -1.64
BRCA1-203ENST00000357654 LTN1O94822 1766 aa4.8□□□□□ -1.64
BRCA1-203ENST00000357654 ZNF98A6NK75 572 aa4.8□□□□□ -1.64
BRCA1-203ENST00000357654 C17orf98A8MV24 154 aa4.8□□□□□ -1.64
BRCA1-203ENST00000357654 C14orf178Q8N769 122 aaPredicted RBP4.8□□□□□ -1.64
BRCA1-203ENST00000357654 HIST1H2BAQ96A08 127 aa4.8□□□□□ -1.64
BRCA1-203ENST00000357654 SCN11AQ9UI33 1791 aa4.8□□□□□ -1.64
BRCA1-203ENST00000357654 FAM90A26D6RGX4 464 aa4.8□□□□□ -1.64
BRCA1-203ENST00000357654 OVOL3O00110 214 aa4.8□□□□□ -1.64
BRCA1-203ENST00000357654 TM4SF5O14894 197 aa4.8□□□□□ -1.64
BRCA1-203ENST00000357654 CTAG1AP78358 180 aa4.8□□□□□ -1.64
BRCA1-203ENST00000357654 TNFRSF14Q92956 283 aa4.8□□□□□ -1.64
BRCA1-203ENST00000357654 COX14Q96I36 57 aa4.8□□□□□ -1.64
BRCA1-203ENST00000357654 MARVELD1Q9BSK0 173 aa4.8□□□□□ -1.64
BRCA1-203ENST00000357654 RPUSD1Q9UJJ7 312 aaKnown RBP4.8□□□□□ -1.64
BRCA1-203ENST00000357654 A0A0A6YYD4 124 aa4.8□□□□□ -1.64
BRCA1-203ENST00000357654 TRBV5-4A0A0C4DH59 114 aa4.8□□□□□ -1.64
BRCA1-203ENST00000357654 H0Y9J4 135 aa4.8□□□□□ -1.64
BRCA1-203ENST00000357654 DEFB4AO15263 64 aa4.8□□□□□ -1.64
BRCA1-203ENST00000357654 CD160O95971 181 aa4.8□□□□□ -1.64
BRCA1-203ENST00000357654 TMEM258P61165 79 aa4.8□□□□□ -1.64
BRCA1-203ENST00000357654 PKIBQ9C010 78 aa4.8□□□□□ -1.64
BRCA1-203ENST00000357654 TMEM222Q9H0R3 208 aa4.8□□□□□ -1.64
BRCA1-203ENST00000357654 CROCCQ5TZA2 2017 aa4.8□□□□□ -1.64
BRCA1-203ENST00000357654 ZFP36P26651 326 aaKnown RBP4.8□□□□□ -1.64
BRCA1-203ENST00000357654 ZNF345Q14585 488 aa4.8□□□□□ -1.64
BRCA1-203ENST00000357654 SURF2Q15527 256 aaPredicted RBP4.8□□□□□ -1.64
BRCA1-203ENST00000357654 RNASE7Q9H1E1 156 aaKnown RBP4.8□□□□□ -1.64
BRCA1-203ENST00000357654 SIGLEC9Q9Y336 463 aa4.8□□□□□ -1.64
BRCA1-203ENST00000357654 IGLV10-54A0A075B6I4 117 aa4.8□□□□□ -1.64
BRCA1-203ENST00000357654 HIGD1CA8MV81 97 aa4.8□□□□□ -1.64
BRCA1-203ENST00000357654 M0R2N4 97 aa4.8□□□□□ -1.64
BRCA1-203ENST00000357654 PRR30Q53SZ7 412 aaPredicted RBP4.8□□□□□ -1.64
BRCA1-203ENST00000357654 LILRA6Q6PI73 481 aa4.8□□□□□ -1.64
BRCA1-203ENST00000357654 CFHR4Q92496 578 aa4.8□□□□□ -1.64
BRCA1-203ENST00000357654 NAA38Q9BRA0 125 aaKnown RBP4.8□□□□□ -1.64
BRCA1-203ENST00000357654 OTORQ9NRC9 128 aa4.8□□□□□ -1.64
BRCA1-203ENST00000357654 CENPVL1A0A0U1RR11 272 aa4.79□□□□□ -1.64
BRCA1-203ENST00000357654 CD5P06127 495 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms