RNA–Protein interactions for RNA: ENST00000356083.7

COL27A1-201, Transcript of collagen type XXVII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL27A1, Length 7,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-201ENST00000356083 FAM209AQ5JX71 171 aa14.48□□□□□ -0.09
COL27A1-201ENST00000356083 TMEM91Q6ZNR0 172 aa14.48□□□□□ -0.09
COL27A1-201ENST00000356083 RNASE6Q93091 150 aaKnown RBP14.48□□□□□ -0.09
COL27A1-201ENST00000356083 MARF1Q9Y4F3 1742 aaKnown RBP14.47□□□□□ -0.09
COL27A1-201ENST00000356083 CEACAM1P13688 526 aa14.47□□□□□ -0.09
COL27A1-201ENST00000356083 SMDT1Q9H4I9 107 aa14.47□□□□□ -0.09
COL27A1-201ENST00000356083 GCM2O75603 506 aaPredicted RBP14.47□□□□□ -0.09
COL27A1-201ENST00000356083 MIR17HGQ75NE6 70 aa14.47□□□□□ -0.09
COL27A1-201ENST00000356083 RPL15P61313 204 aaKnown RBP14.47□□□□□ -0.09
COL27A1-201ENST00000356083 MORN3Q6PF18 240 aaPredicted RBP14.47□□□□□ -0.09
COL27A1-201ENST00000356083 THAP8Q8NA92 274 aa14.47□□□□□ -0.09
COL27A1-201ENST00000356083 GGTLC1Q9BX51 225 aa14.47□□□□□ -0.09
COL27A1-201ENST00000356083 IFI27L2Q9H2X8 130 aa14.47□□□□□ -0.09
COL27A1-201ENST00000356083 ERCC8Q13216 396 aa14.47□□□□□ -0.09
COL27A1-201ENST00000356083 TRAV13-1A0A0B4J241 112 aa14.47□□□□□ -0.09
COL27A1-201ENST00000356083 GATAD1Q8WUU5 269 aa14.47□□□□□ -0.09
COL27A1-201ENST00000356083 TM4SF5O14894 197 aa14.46□□□□□ -0.09
COL27A1-201ENST00000356083 DPM2O94777 84 aa14.46□□□□□ -0.09
COL27A1-201ENST00000356083 PRTN3P24158 256 aa14.46□□□□□ -0.09
COL27A1-201ENST00000356083 MDS2Q8NDY4 140 aa14.46□□□□□ -0.09
COL27A1-201ENST00000356083 NCR2O95944 276 aa14.46□□□□□ -0.09
COL27A1-201ENST00000356083 ZNF329Q86UD4 541 aa14.46□□□□□ -0.09
COL27A1-201ENST00000356083 C5orf66Q9H5L9 145 aa14.46□□□□□ -0.09
COL27A1-201ENST00000356083 SIRT4Q9Y6E7 314 aaPredicted RBP14.46□□□□□ -0.09
COL27A1-201ENST00000356083 DLEC1Q9Y238 1755 aa14.46□□□□□ -0.09
COL27A1-201ENST00000356083 FCN3O75636 299 aa14.46□□□□□ -0.09
COL27A1-201ENST00000356083 HOXB1P14653 301 aaPredicted RBP14.46□□□□□ -0.09
COL27A1-201ENST00000356083 SNHG12Q9BXW3 62 aa14.46□□□□□ -0.09
COL27A1-201ENST00000356083 ATXN8Q156A1 80 aa14.46□□□□□ -0.1
COL27A1-201ENST00000356083 ZNF876PQ49A33 203 aa14.46□□□□□ -0.1
COL27A1-201ENST00000356083 BRD3OSQ6XYD6 125 aa14.46□□□□□ -0.1
COL27A1-201ENST00000356083 SMIM8Q96KF7 97 aa14.45□□□□□ -0.1
COL27A1-201ENST00000356083 ASCL2Q99929 193 aa14.45□□□□□ -0.1
COL27A1-201ENST00000356083 ERG28Q9UKR5 140 aa14.45□□□□□ -0.1
COL27A1-201ENST00000356083 ZNF345Q14585 488 aa14.45□□□□□ -0.1
COL27A1-201ENST00000356083 IGKV2-40A0A087WW87 121 aaPredicted RBP14.45□□□□□ -0.1
COL27A1-201ENST00000356083 C17orf98A8MV24 154 aa14.45□□□□□ -0.1
COL27A1-201ENST00000356083 ZNF561-AS1K7EIQ3 104 aa14.45□□□□□ -0.1
COL27A1-201ENST00000356083 IGKV2D-40P01614 121 aaPredicted RBP14.45□□□□□ -0.1
COL27A1-201ENST00000356083 CA7P43166 264 aa14.45□□□□□ -0.1
COL27A1-201ENST00000356083 OR5P3Q8WZ94 311 aa14.45□□□□□ -0.1
COL27A1-201ENST00000356083 C17orf100A8MU93 164 aa14.44□□□□□ -0.1
COL27A1-201ENST00000356083 J3QW42 95 aa14.44□□□□□ -0.1
COL27A1-201ENST00000356083 ATP5G3P48201 142 aa14.44□□□□□ -0.1
COL27A1-201ENST00000356083 FAM166AQ6J272 317 aa14.44□□□□□ -0.1
COL27A1-201ENST00000356083 IL36BQ9NZH7 164 aa14.44□□□□□ -0.1
COL27A1-201ENST00000356083 FAM90A26D6RGX4 464 aa14.44□□□□□ -0.1
COL27A1-201ENST00000356083 KLRD1Q13241 179 aa14.44□□□□□ -0.1
COL27A1-201ENST00000356083 NAV3Q8IVL0 2385 aa14.44□□□□□ -0.1
COL27A1-201ENST00000356083 hADV29S1A0JD25 119 aa14.44□□□□□ -0.1
COL27A1-201ENST00000356083 TCRAP04437 139 aa14.44□□□□□ -0.1
COL27A1-201ENST00000356083 C2orf68Q2NKX9 166 aa14.44□□□□□ -0.1
COL27A1-201ENST00000356083 FOXL1Q12952 345 aa14.44□□□□□ -0.1
COL27A1-201ENST00000356083 ASPHD2Q6ICH7 369 aa14.44□□□□□ -0.1
COL27A1-201ENST00000356083 GDF15Q99988 308 aa14.44□□□□□ -0.1
COL27A1-201ENST00000356083 TRGV11A0A075B6L2 103 aa14.44□□□□□ -0.1
COL27A1-201ENST00000356083 IGHV1-2P23083 117 aa14.44□□□□□ -0.1
COL27A1-201ENST00000356083 SCRT1Q9BWW7 348 aa14.44□□□□□ -0.1
COL27A1-201ENST00000356083 CD55P08174 381 aa14.43□□□□□ -0.1
COL27A1-201ENST00000356083 CSPG4Q6UVK1 2322 aa14.43□□□□□ -0.1
COL27A1-201ENST00000356083 THBDP07204 575 aa14.43□□□□□ -0.1
COL27A1-201ENST00000356083 F8VVB4 439 aa14.43□□□□□ -0.1
COL27A1-201ENST00000356083 F8VWA3 439 aa14.43□□□□□ -0.1
COL27A1-201ENST00000356083 PRR31Q5SQ13 230 aa14.43□□□□□ -0.1
COL27A1-201ENST00000356083 IGHV2OR16-5A0A0B4J2B6 119 aa14.43□□□□□ -0.1
COL27A1-201ENST00000356083 H3BMM0 161 aa14.43□□□□□ -0.1
COL27A1-201ENST00000356083 UBE2WQ96B02 151 aa14.43□□□□□ -0.1
COL27A1-201ENST00000356083 A0A0G2JMM0 328 aa14.43□□□□□ -0.1
COL27A1-201ENST00000356083 A0A1W2PPB8 328 aa14.43□□□□□ -0.1
COL27A1-201ENST00000356083 A0A1W2PRS3 328 aa14.43□□□□□ -0.1
COL27A1-201ENST00000356083 KIR3DP1A8MWS1 328 aa14.43□□□□□ -0.1
COL27A1-201ENST00000356083 CD5LO43866 347 aa14.43□□□□□ -0.1
COL27A1-201ENST00000356083 TNFRSF6BO95407 300 aa14.42□□□□□ -0.1
COL27A1-201ENST00000356083 OSR1Q8TAX0 266 aaPredicted RBP14.42□□□□□ -0.1
COL27A1-201ENST00000356083 SLC50A1Q9BRV3 221 aa14.42□□□□□ -0.1
COL27A1-201ENST00000356083 SS18Q15532 418 aa14.42□□□□□ -0.1
COL27A1-201ENST00000356083 KLF12Q9Y4X4 402 aa14.42□□□□□ -0.1
COL27A1-201ENST00000356083 ADAMTS9Q9P2N4 1935 aa14.42□□□□□ -0.1
COL27A1-201ENST00000356083 NYNRINQ9P2P1 1898 aaKnown RBP14.42□□□□□ -0.1
COL27A1-201ENST00000356083 A8MXK9 166 aa14.42□□□□□ -0.1
COL27A1-201ENST00000356083 SRRM4A7MD48 611 aaKnown RBP14.42□□□□□ -0.1
COL27A1-201ENST00000356083 ARID2Q68CP9 1835 aa14.42□□□□□ -0.1
COL27A1-201ENST00000356083 C5orf67F2Z3F1 127 aa14.41□□□□□ -0.1
COL27A1-201ENST00000356083 RPL36AP83881 106 aaKnown RBP14.41□□□□□ -0.1
COL27A1-201ENST00000356083 NKAPP1Q8N9T2 125 aa14.41□□□□□ -0.1
COL27A1-201ENST00000356083 RPL36ALQ969Q0 106 aaKnown RBP14.41□□□□□ -0.1
COL27A1-201ENST00000356083 GGACTQ9BVM4 153 aa14.41□□□□□ -0.1
COL27A1-201ENST00000356083 ALS2Q96Q42 1657 aa14.41□□□□□ -0.1
COL27A1-201ENST00000356083 SSBP2P81877 361 aaPredicted RBP14.41□□□□□ -0.1
COL27A1-201ENST00000356083 DTX1Q86Y01 620 aa14.41□□□□□ -0.1
COL27A1-201ENST00000356083 ZMAT4Q9H898 229 aa14.41□□□□□ -0.1
COL27A1-201ENST00000356083 BHLHA9Q7RTU4 235 aa14.41□□□□□ -0.1
COL27A1-201ENST00000356083 PIP4P2Q8N4L2 257 aa14.41□□□□□ -0.1
COL27A1-201ENST00000356083 PRB2P02812 416 aaPredicted RBP14.41□□□□□ -0.1
COL27A1-201ENST00000356083 SLC25A39Q9BZJ4 359 aaPredicted RBP14.41□□□□□ -0.1
COL27A1-201ENST00000356083 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP14.41□□□□□ -0.1
COL27A1-201ENST00000356083 PLA2G10O15496 165 aa14.41□□□□□ -0.1
COL27A1-201ENST00000356083 NGFRP08138 427 aa14.41□□□□□ -0.1
COL27A1-201ENST00000356083 E9PQ18 207 aa14.4□□□□□ -0.1
COL27A1-201ENST00000356083 RNF125Q96EQ8 232 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 90.9 ms