RNA–Protein interactions for RNA: ENST00000355354.11

CD47-201, Transcript of CD47 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD47, Length 5,020 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-201ENST00000355354 TMEM177Q53S58 311 aa4.35□□□□□ -1.71
CD47-201ENST00000355354 C2orf91Q6ZV80 131 aa4.35□□□□□ -1.71
CD47-201ENST00000355354 LPAR2Q9HBW0 351 aa4.35□□□□□ -1.71
CD47-201ENST00000355354 GAR1Q9NY12 217 aaKnown RBP4.35□□□□□ -1.71
CD47-201ENST00000355354 COMMD9Q9P000 198 aa4.35□□□□□ -1.71
CD47-201ENST00000355354 TRBV24-1A0A075B6N3 115 aa4.35□□□□□ -1.71
CD47-201ENST00000355354 E5RGE8 158 aa4.35□□□□□ -1.71
CD47-201ENST00000355354 HSPA12AO43301 675 aa4.35□□□□□ -1.71
CD47-201ENST00000355354 GFRALQ6UXV0 394 aa4.35□□□□□ -1.71
CD47-201ENST00000355354 SDHAF3Q9NRP4 125 aa4.35□□□□□ -1.71
CD47-201ENST00000355354 PSENENQ9NZ42 101 aa4.35□□□□□ -1.71
CD47-201ENST00000355354 SCGNO76038 276 aa4.34□□□□□ -1.71
CD47-201ENST00000355354 KBTBD11O94819 623 aa4.34□□□□□ -1.71
CD47-201ENST00000355354 LY6G6DO95868 133 aa4.34□□□□□ -1.71
CD47-201ENST00000355354 ZNF25P17030 456 aaPredicted RBP4.34□□□□□ -1.71
CD47-201ENST00000355354 EMP1P54849 157 aa4.34□□□□□ -1.71
CD47-201ENST00000355354 KLF5Q13887 457 aaPredicted RBP4.34□□□□□ -1.71
CD47-201ENST00000355354 NEGR1Q7Z3B1 354 aa4.34□□□□□ -1.71
CD47-201ENST00000355354 LINC01560Q8TB33 94 aa4.34□□□□□ -1.71
CD47-201ENST00000355354 MRPL20Q9BYC9 149 aaKnown RBP4.34□□□□□ -1.71
CD47-201ENST00000355354 IDI2-AS1Q9NZ38 188 aa4.34□□□□□ -1.71
CD47-201ENST00000355354 WDR83OSQ9Y284 106 aa4.34□□□□□ -1.71
CD47-201ENST00000355354 BIRC6Q9NR09 4857 aa4.34□□□□□ -1.71
CD47-201ENST00000355354 TRAV26-2A0A0B4J265 109 aa4.34□□□□□ -1.71
CD47-201ENST00000355354 RANP62826 216 aaKnown RBP4.34□□□□□ -1.71
CD47-201ENST00000355354 RNF182Q8N6D2 247 aa4.34□□□□□ -1.71
CD47-201ENST00000355354 OR5B3Q8NH48 314 aa4.34□□□□□ -1.71
CD47-201ENST00000355354 NPIPB3Q92617 1050 aa4.34□□□□□ -1.71
CD47-201ENST00000355354 MALSU1Q96EH3 234 aa4.34□□□□□ -1.71
CD47-201ENST00000355354 DUX5Q96PT3 197 aa4.34□□□□□ -1.71
CD47-201ENST00000355354 RGCCQ9H4X1 137 aa4.34□□□□□ -1.71
CD47-201ENST00000355354 SIRT7Q9NRC8 400 aa4.34□□□□□ -1.71
CD47-201ENST00000355354 OBSCNQ5VST9 7968 aa4.34□□□□□ -1.71
CD47-201ENST00000355354 A0A1B0GWJ7 208 aa4.34□□□□□ -1.71
CD47-201ENST00000355354 A8MZ25 164 aa4.34□□□□□ -1.71
CD47-201ENST00000355354 G3V318 75 aa4.34□□□□□ -1.71
CD47-201ENST00000355354 CSN3P07498 182 aa4.34□□□□□ -1.71
CD47-201ENST00000355354 FAM189A2Q15884 450 aa4.34□□□□□ -1.71
CD47-201ENST00000355354 FAHD2BQ6P2I3 314 aaPredicted RBP4.34□□□□□ -1.71
CD47-201ENST00000355354 ZBTB34Q8NCN2 500 aa4.34□□□□□ -1.71
CD47-201ENST00000355354 OR4P4Q8NGL7 312 aa4.34□□□□□ -1.71
CD47-201ENST00000355354 OR10G7Q8NGN6 311 aa4.34□□□□□ -1.71
CD47-201ENST00000355354 MBD3L1Q8WWY6 194 aa4.34□□□□□ -1.71
CD47-201ENST00000355354 FAHD2AQ96GK7 314 aa4.34□□□□□ -1.71
CD47-201ENST00000355354 CHRDL1Q9BU40 450 aa4.34□□□□□ -1.71
CD47-201ENST00000355354 ZNF430Q9H8G1 570 aaPredicted RBP4.34□□□□□ -1.71
CD47-201ENST00000355354 TNFRSF19Q9NS68 423 aa4.34□□□□□ -1.71
CD47-201ENST00000355354 TRAPPC2LQ9UL33 140 aa4.34□□□□□ -1.71
CD47-201ENST00000355354 KCNS2Q9ULS6 477 aa4.34□□□□□ -1.71
CD47-201ENST00000355354 TIMM8BQ9Y5J9 83 aaPredicted RBP4.34□□□□□ -1.71
CD47-201ENST00000355354 PCLOQ9Y6V0 5065 aa4.34□□□□□ -1.72
CD47-201ENST00000355354 SHISA9B4DS77 424 aa4.34□□□□□ -1.72
CD47-201ENST00000355354 H0Y8G0 127 aa4.34□□□□□ -1.72
CD47-201ENST00000355354 SRD5A2P31213 254 aa4.34□□□□□ -1.72
CD47-201ENST00000355354 HMGN3Q15651 99 aa4.34□□□□□ -1.72
CD47-201ENST00000355354 MSMO1Q15800 293 aa4.34□□□□□ -1.72
CD47-201ENST00000355354 ADIPOQQ15848 244 aa4.34□□□□□ -1.72
CD47-201ENST00000355354 K7ERJ3 54 aa4.33□□□□□ -1.72
CD47-201ENST00000355354 CRLF1O75462 422 aa4.33□□□□□ -1.72
CD47-201ENST00000355354 NUTF2P61970 127 aaKnown RBP4.33□□□□□ -1.72
CD47-201ENST00000355354 USF2Q15853 346 aaPredicted RBP4.33□□□□□ -1.72
CD47-201ENST00000355354 BSXQ3C1V8 233 aa4.33□□□□□ -1.72
CD47-201ENST00000355354 COA6Q5JTJ3 125 aaKnown RBP4.33□□□□□ -1.72
CD47-201ENST00000355354 AMTNQ6UX39 209 aa4.33□□□□□ -1.72
CD47-201ENST00000355354 C18orf32Q8TCD1 76 aa4.33□□□□□ -1.72
CD47-201ENST00000355354 PXMP4Q9Y6I8 212 aa4.33□□□□□ -1.72
CD47-201ENST00000355354 C11orf94C9JXX5 98 aa4.33□□□□□ -1.72
CD47-201ENST00000355354 M0R1X1 148 aa4.33□□□□□ -1.72
CD47-201ENST00000355354 TMPRSS2O15393 492 aa4.33□□□□□ -1.72
CD47-201ENST00000355354 ARMS2P0C7Q2 107 aa4.33□□□□□ -1.72
CD47-201ENST00000355354 SMCO1Q147U7 214 aa4.33□□□□□ -1.72
CD47-201ENST00000355354 TMEM136Q6ZRR5 245 aa4.33□□□□□ -1.72
CD47-201ENST00000355354 MAPKAPK5-AS1Q8N8E1 139 aa4.33□□□□□ -1.72
CD47-201ENST00000355354 TCF19Q9Y242 345 aa4.33□□□□□ -1.72
CD47-201ENST00000355354 NXPH2O95156 264 aa4.33□□□□□ -1.72
CD47-201ENST00000355354 IGHV1-46P01743 117 aa4.33□□□□□ -1.72
CD47-201ENST00000355354 RAB4AP20338 218 aa4.33□□□□□ -1.72
CD47-201ENST00000355354 RAB7AP51149 207 aa4.33□□□□□ -1.72
CD47-201ENST00000355354 TMEM183BQ1AE95 376 aa4.33□□□□□ -1.72
CD47-201ENST00000355354 CYP2G1PQ6ZSU1 146 aa4.33□□□□□ -1.72
CD47-201ENST00000355354 GPHB5Q86YW7 130 aa4.33□□□□□ -1.72
CD47-201ENST00000355354 TMEM183AQ8IXX5 376 aa4.33□□□□□ -1.72
CD47-201ENST00000355354 C8orf49Q96NF6 230 aa4.33□□□□□ -1.72
CD47-201ENST00000355354 PAXXQ9BUH6 204 aa4.33□□□□□ -1.72
CD47-201ENST00000355354 TMEM140Q9NV12 185 aa4.33□□□□□ -1.72
CD47-201ENST00000355354 C1orf123Q9NWV4 160 aa4.33□□□□□ -1.72
CD47-201ENST00000355354 ZNF107Q9UII5 783 aaPredicted RBP4.33□□□□□ -1.72
CD47-201ENST00000355354 KIR2DL5BA0A0G2JN68 375 aa4.33□□□□□ -1.72
CD47-201ENST00000355354 KIR2DL5BA0A0G2JPC4 375 aa4.33□□□□□ -1.72
CD47-201ENST00000355354 LRP5LA4QPB2 252 aa4.33□□□□□ -1.72
CD47-201ENST00000355354 SLC25A17O43808 307 aa4.33□□□□□ -1.72
CD47-201ENST00000355354 HAND1O96004 215 aa4.33□□□□□ -1.72
CD47-201ENST00000355354 LHBP01229 141 aa4.33□□□□□ -1.72
CD47-201ENST00000355354 IGLV2-23P01705 113 aa4.33□□□□□ -1.72
CD47-201ENST00000355354 SAA1P0DJI8 122 aaPredicted RBP4.33□□□□□ -1.72
CD47-201ENST00000355354 SRD5A1P18405 259 aa4.33□□□□□ -1.72
CD47-201ENST00000355354 CENPWQ5EE01 88 aa4.33□□□□□ -1.72
CD47-201ENST00000355354 FBXW9Q5XUX1 488 aa4.33□□□□□ -1.72
CD47-201ENST00000355354 ZNF695Q8IW36 515 aa4.33□□□□□ -1.72
CD47-201ENST00000355354 KIR2DL5AQ8N109 375 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms