RNA–Protein interactions for RNA: ENST00000353442.9

LMBR1-201, Transcript of limb development membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMBR1, Length 7,997 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-201ENST00000353442 TEX43Q6ZNM6 134 aa11.15□□□□□ -0.62
LMBR1-201ENST00000353442 OTOFQ9HC10 1997 aa11.15□□□□□ -0.62
LMBR1-201ENST00000353442 C10orf55Q5SWW7 151 aa11.15□□□□□ -0.62
LMBR1-201ENST00000353442 CFHR5Q9BXR6 569 aa11.15□□□□□ -0.62
LMBR1-201ENST00000353442 IGKV1OR2-108A0A075B7D4 117 aa11.15□□□□□ -0.62
LMBR1-201ENST00000353442 IQCF6A8MYZ5 107 aa11.15□□□□□ -0.62
LMBR1-201ENST00000353442 STPG2Q8N412 459 aa11.15□□□□□ -0.62
LMBR1-201ENST00000353442 SHANK3Q9BYB0 1731 aa11.15□□□□□ -0.62
LMBR1-201ENST00000353442 TRBV9A0A0B4J1U6 114 aa11.15□□□□□ -0.62
LMBR1-201ENST00000353442 DPM2O94777 84 aa11.15□□□□□ -0.62
LMBR1-201ENST00000353442 PFN2P35080 140 aa11.15□□□□□ -0.62
LMBR1-201ENST00000353442 SELLP14151 372 aa11.15□□□□□ -0.63
LMBR1-201ENST00000353442 C20orf204Q6ZNR8 217 aa11.15□□□□□ -0.63
LMBR1-201ENST00000353442 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.15□□□□□ -0.63
LMBR1-201ENST00000353442 DEPPQ9NTK1 212 aa11.15□□□□□ -0.63
LMBR1-201ENST00000353442 GAGE12BA1L429 117 aa11.14□□□□□ -0.63
LMBR1-201ENST00000353442 GAGE7O76087 117 aa11.14□□□□□ -0.63
LMBR1-201ENST00000353442 HLA-DQB1P01920 261 aa11.14□□□□□ -0.63
LMBR1-201ENST00000353442 GAGE12FP0CL80 117 aa11.14□□□□□ -0.63
LMBR1-201ENST00000353442 GAGE12GP0CL81 117 aa11.14□□□□□ -0.63
LMBR1-201ENST00000353442 GAGE12IP0CL82 117 aa11.14□□□□□ -0.63
LMBR1-201ENST00000353442 ZNF345Q14585 488 aa11.14□□□□□ -0.63
LMBR1-201ENST00000353442 PVRIGQ6DKI7 326 aa11.14□□□□□ -0.63
LMBR1-201ENST00000353442 SCRT1Q9BWW7 348 aa11.14□□□□□ -0.63
LMBR1-201ENST00000353442 MEGF9Q9H1U4 602 aa11.14□□□□□ -0.63
LMBR1-201ENST00000353442 PLAC1Q9HBJ0 212 aa11.14□□□□□ -0.63
LMBR1-201ENST00000353442 TRAV9-2A0A087WT02 112 aa11.14□□□□□ -0.63
LMBR1-201ENST00000353442 NXPH4O95158 308 aa11.14□□□□□ -0.63
LMBR1-201ENST00000353442 F5P12259 2224 aa11.14□□□□□ -0.63
LMBR1-201ENST00000353442 EXOC3-AS1Q8N2X6 119 aa11.14□□□□□ -0.63
LMBR1-201ENST00000353442 TCRAP04437 139 aa11.14□□□□□ -0.63
LMBR1-201ENST00000353442 DMRTC2Q8IXT2 367 aaPredicted RBP11.14□□□□□ -0.63
LMBR1-201ENST00000353442 GGTLC1Q9BX51 225 aa11.14□□□□□ -0.63
LMBR1-201ENST00000353442 C1QTNF4Q9BXJ3 329 aa11.14□□□□□ -0.63
LMBR1-201ENST00000353442 RASL10AQ92737 203 aa11.14□□□□□ -0.63
LMBR1-201ENST00000353442 TJP1Q07157 1748 aa11.14□□□□□ -0.63
LMBR1-201ENST00000353442 TRBV5-5A0A0J9YX44 114 aa11.13□□□□□ -0.63
LMBR1-201ENST00000353442 LGALS1P09382 135 aaKnown RBP11.13□□□□□ -0.63
LMBR1-201ENST00000353442 TAL2Q16559 108 aa11.13□□□□□ -0.63
LMBR1-201ENST00000353442 TRAV8-3A0A0A6YYJ7 113 aa11.13□□□□□ -0.63
LMBR1-201ENST00000353442 PRB2P02812 416 aaPredicted RBP11.13□□□□□ -0.63
LMBR1-201ENST00000353442 IGKCP01834 107 aa11.13□□□□□ -0.63
LMBR1-201ENST00000353442 SCN1AP35498 2009 aa11.13□□□□□ -0.63
LMBR1-201ENST00000353442 A0A0G2JNJ9 132 aa11.13□□□□□ -0.63
LMBR1-201ENST00000353442 PMS2P5A8MQ11 134 aa11.13□□□□□ -0.63
LMBR1-201ENST00000353442 SPXQ9BT56 116 aa11.13□□□□□ -0.63
LMBR1-201ENST00000353442 NRN1Q9NPD7 142 aa11.13□□□□□ -0.63
LMBR1-201ENST00000353442 Q9UFV3 132 aa11.13□□□□□ -0.63
LMBR1-201ENST00000353442 ERG28Q9UKR5 140 aa11.13□□□□□ -0.63
LMBR1-201ENST00000353442 CACNA1GO43497 2377 aa11.13□□□□□ -0.63
LMBR1-201ENST00000353442 Q8TAT8 98 aa11.13□□□□□ -0.63
LMBR1-201ENST00000353442 C1QTNF9P0C862 333 aa11.13□□□□□ -0.63
LMBR1-201ENST00000353442 ORMDL2Q53FV1 153 aa11.13□□□□□ -0.63
LMBR1-201ENST00000353442 TMEM200BQ69YZ2 307 aa11.13□□□□□ -0.63
LMBR1-201ENST00000353442 RPUSD1Q9UJJ7 312 aaKnown RBP11.13□□□□□ -0.63
LMBR1-201ENST00000353442 KLF12Q9Y4X4 402 aa11.13□□□□□ -0.63
LMBR1-201ENST00000353442 MORN2Q502X0 79 aa11.12□□□□□ -0.63
LMBR1-201ENST00000353442 TMEM144Q7Z5S9 345 aa11.12□□□□□ -0.63
LMBR1-201ENST00000353442 IZUMO1RA6ND01 250 aa11.12□□□□□ -0.63
LMBR1-201ENST00000353442 ATP5L2Q7Z4Y8 100 aa11.12□□□□□ -0.63
LMBR1-201ENST00000353442 C15orf61A6NNL5 157 aa11.12□□□□□ -0.63
LMBR1-201ENST00000353442 LIMS1P48059 325 aa11.12□□□□□ -0.63
LMBR1-201ENST00000353442 ZNF883P0CG24 379 aa11.12□□□□□ -0.63
LMBR1-201ENST00000353442 CLDN16Q9Y5I7 305 aa11.12□□□□□ -0.63
LMBR1-201ENST00000353442 ABCA3Q99758 1704 aa11.12□□□□□ -0.63
LMBR1-201ENST00000353442 HEATR5BQ9P2D3 2071 aa11.12□□□□□ -0.63
LMBR1-201ENST00000353442 IGKV2D-24A0A075B6R9 120 aa11.12□□□□□ -0.63
LMBR1-201ENST00000353442 A0A0J9YY99 117 aa11.12□□□□□ -0.63
LMBR1-201ENST00000353442 DKK1O94907 266 aa11.12□□□□□ -0.63
LMBR1-201ENST00000353442 ARHGEF17Q96PE2 2063 aaPredicted RBP11.12□□□□□ -0.63
LMBR1-201ENST00000353442 PRR30Q53SZ7 412 aaPredicted RBP11.12□□□□□ -0.63
LMBR1-201ENST00000353442 RCC1LQ96I51 464 aaKnown RBP11.12□□□□□ -0.63
LMBR1-201ENST00000353442 ITGB4P16144 1822 aa11.11□□□□□ -0.63
LMBR1-201ENST00000353442 UCP3P55916 312 aa11.11□□□□□ -0.63
LMBR1-201ENST00000353442 KLK9Q9UKQ9 250 aa11.11□□□□□ -0.63
LMBR1-201ENST00000353442 EPDR1Q9UM22 224 aa11.11□□□□□ -0.63
LMBR1-201ENST00000353442 LEPROTO15243 131 aa11.11□□□□□ -0.63
LMBR1-201ENST00000353442 COL8A2P25067 703 aa11.11□□□□□ -0.63
LMBR1-201ENST00000353442 IGHV3-38A0A0C4DH36 116 aa11.11□□□□□ -0.63
LMBR1-201ENST00000353442 PUSL1Q8N0Z8 303 aaKnown RBP11.11□□□□□ -0.63
LMBR1-201ENST00000353442 SLC25A38Q96DW6 304 aa11.11□□□□□ -0.63
LMBR1-201ENST00000353442 TPTE2P1Q5T6R2 138 aa11.11□□□□□ -0.63
LMBR1-201ENST00000353442 LCN12Q6JVE5 192 aa11.11□□□□□ -0.63
LMBR1-201ENST00000353442 CACNG8Q8WXS5 425 aa11.11□□□□□ -0.63
LMBR1-201ENST00000353442 IGF2BP2-AS1Q96M15 143 aa11.11□□□□□ -0.63
LMBR1-201ENST00000353442 PIKFYVEQ9Y2I7 2098 aa11.11□□□□□ -0.63
LMBR1-201ENST00000353442 RP1P56715 2156 aa11.11□□□□□ -0.63
LMBR1-201ENST00000353442 SLC25A16P16260 332 aa11.11□□□□□ -0.63
LMBR1-201ENST00000353442 GAGE6Q13070 117 aa11.11□□□□□ -0.63
LMBR1-201ENST00000353442 GAGE2AQ6NT46 116 aa11.11□□□□□ -0.63
LMBR1-201ENST00000353442 A8MXK9 166 aa11.11□□□□□ -0.63
LMBR1-201ENST00000353442 C14orf178Q8N769 122 aaPredicted RBP11.11□□□□□ -0.63
LMBR1-201ENST00000353442 OCIAD2Q56VL3 154 aa11.1□□□□□ -0.63
LMBR1-201ENST00000353442 NAA38Q9BRA0 125 aaKnown RBP11.1□□□□□ -0.63
LMBR1-201ENST00000353442 ANAPC13Q9BS18 74 aa11.1□□□□□ -0.63
LMBR1-201ENST00000353442 hADV29S1A0JD25 119 aa11.1□□□□□ -0.63
LMBR1-201ENST00000353442 ZNF646O15015 1829 aaPredicted RBP11.1□□□□□ -0.63
LMBR1-201ENST00000353442 KLF5Q13887 457 aaPredicted RBP11.1□□□□□ -0.63
LMBR1-201ENST00000353442 PRIMA1Q86XR5 153 aa11.1□□□□□ -0.63
LMBR1-201ENST00000353442 CSTL1Q9H114 145 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms