RNA–Protein interactions for RNA: ENST00000350148.9

SMAD9-201, Transcript of SMAD family member 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMAD9, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-201ENST00000350148 MRPL18Q9H0U6 180 aaKnown RBP9.99□□□□□ -0.81
SMAD9-201ENST00000350148 GEMIN7Q9H840 131 aaKnown RBP9.99□□□□□ -0.81
SMAD9-201ENST00000350148 PF4V1P10720 104 aa9.99□□□□□ -0.81
SMAD9-201ENST00000350148 S100A4P26447 101 aaKnown RBP9.99□□□□□ -0.81
SMAD9-201ENST00000350148 CD69Q07108 199 aa9.99□□□□□ -0.81
SMAD9-201ENST00000350148 COX11Q9Y6N1 276 aa9.99□□□□□ -0.81
SMAD9-201ENST00000350148 TFF1P04155 84 aa9.99□□□□□ -0.81
SMAD9-201ENST00000350148 RPL30P62888 115 aaKnown RBP9.99□□□□□ -0.81
SMAD9-201ENST00000350148 IGKV1-6A0A0C4DH72 117 aa9.99□□□□□ -0.81
SMAD9-201ENST00000350148 GUSBP1Q15486 140 aa9.99□□□□□ -0.81
SMAD9-201ENST00000350148 FBXL19-AS1Q494R0 122 aa9.99□□□□□ -0.81
SMAD9-201ENST00000350148 FER1L5A0AVI2 2057 aa9.98□□□□□ -0.81
SMAD9-201ENST00000350148 TRAV8-2A0A0B4J237 113 aa9.98□□□□□ -0.81
SMAD9-201ENST00000350148 A0A1B0GW64 132 aa9.98□□□□□ -0.81
SMAD9-201ENST00000350148 LYNX1G3V0Z9 82 aa9.98□□□□□ -0.81
SMAD9-201ENST00000350148 H0YJW9 148 aa9.98□□□□□ -0.81
SMAD9-201ENST00000350148 APELAP0DMC3 54 aa9.98□□□□□ -0.81
SMAD9-201ENST00000350148 LYNX1P0DP58 116 aa9.98□□□□□ -0.81
SMAD9-201ENST00000350148 PRTN3P24158 256 aa9.98□□□□□ -0.81
SMAD9-201ENST00000350148 OR1N2Q8NGR9 330 aa9.98□□□□□ -0.81
SMAD9-201ENST00000350148 SRSF12Q8WXF0 261 aaKnown RBP9.98□□□□□ -0.81
SMAD9-201ENST00000350148 SSBP4Q9BWG4 385 aaPredicted RBP9.98□□□□□ -0.81
SMAD9-201ENST00000350148 TRAV1-1A0A0B4J248 108 aa9.98□□□□□ -0.81
SMAD9-201ENST00000350148 SELLP14151 372 aa9.98□□□□□ -0.81
SMAD9-201ENST00000350148 GATA3P23771 443 aa9.98□□□□□ -0.81
SMAD9-201ENST00000350148 WNT10AQ9GZT5 417 aa9.98□□□□□ -0.81
SMAD9-201ENST00000350148 SMIM17P0DL12 118 aa9.98□□□□□ -0.81
SMAD9-201ENST00000350148 COL8A1P27658 744 aa9.98□□□□□ -0.81
SMAD9-201ENST00000350148 PYY3Q5JQD4 70 aa9.98□□□□□ -0.81
SMAD9-201ENST00000350148 AMMECR1LQ6DCA0 310 aa9.98□□□□□ -0.81
SMAD9-201ENST00000350148 C21orf62Q9NYP8 219 aa9.98□□□□□ -0.81
SMAD9-201ENST00000350148 IGHV1-3A0A0C4DH29 117 aa9.98□□□□□ -0.81
SMAD9-201ENST00000350148 AREGP15514 252 aa9.98□□□□□ -0.81
SMAD9-201ENST00000350148 RPS20P60866 119 aaKnown RBP9.98□□□□□ -0.81
SMAD9-201ENST00000350148 PRSS8Q16651 343 aa9.98□□□□□ -0.81
SMAD9-201ENST00000350148 ORAOV1Q8WV07 137 aa9.98□□□□□ -0.81
SMAD9-201ENST00000350148 GPR82Q96P67 336 aa9.98□□□□□ -0.81
SMAD9-201ENST00000350148 HS3ST6Q96QI5 342 aa9.98□□□□□ -0.81
SMAD9-201ENST00000350148 NEU1Q99519 415 aa9.98□□□□□ -0.81
SMAD9-201ENST00000350148 CYTL1Q9NRR1 136 aa9.98□□□□□ -0.81
SMAD9-201ENST00000350148 ZNF581Q9P0T4 197 aa9.98□□□□□ -0.81
SMAD9-201ENST00000350148 OR2T8A6NH00 312 aa9.97□□□□□ -0.81
SMAD9-201ENST00000350148 C9JQL5 133 aa9.97□□□□□ -0.81
SMAD9-201ENST00000350148 GBGT1Q8N5D6 347 aa9.97□□□□□ -0.81
SMAD9-201ENST00000350148 A8MWL6 223 aa9.97□□□□□ -0.81
SMAD9-201ENST00000350148 ACACAQ13085 2346 aa9.97□□□□□ -0.81
SMAD9-201ENST00000350148 IGHV3-21A0A0B4J1V1 117 aa9.97□□□□□ -0.81
SMAD9-201ENST00000350148 B4DSR2 109 aa9.97□□□□□ -0.81
SMAD9-201ENST00000350148 BUB1B-PAK6H3BSN5 160 aa9.97□□□□□ -0.81
SMAD9-201ENST00000350148 NDUFB4O95168 129 aa9.97□□□□□ -0.81
SMAD9-201ENST00000350148 COL8A2P25067 703 aa9.97□□□□□ -0.81
SMAD9-201ENST00000350148 DLX6P56179 175 aa9.97□□□□□ -0.81
SMAD9-201ENST00000350148 KIR3DL3Q8N743 410 aa9.97□□□□□ -0.81
SMAD9-201ENST00000350148 ATP6V0BQ99437 205 aa9.97□□□□□ -0.81
SMAD9-201ENST00000350148 RFNGQ9Y644 331 aa9.97□□□□□ -0.81
SMAD9-201ENST00000350148 RELBQ01201 579 aa9.97□□□□□ -0.81
SMAD9-201ENST00000350148 OR2K2Q8NGT1 345 aa9.97□□□□□ -0.81
SMAD9-201ENST00000350148 SLC25A33Q9BSK2 321 aa9.97□□□□□ -0.81
SMAD9-201ENST00000350148 C11orf68Q9H3H3 251 aaKnown RBP9.97□□□□□ -0.81
SMAD9-201ENST00000350148 GRIFINA4D1Z8 144 aa9.96□□□□□ -0.81
SMAD9-201ENST00000350148 TIMM23O14925 209 aa9.96□□□□□ -0.81
SMAD9-201ENST00000350148 IGFBP2P18065 325 aa9.96□□□□□ -0.81
SMAD9-201ENST00000350148 TFF3Q07654 80 aa9.96□□□□□ -0.81
SMAD9-201ENST00000350148 MYOZ3Q8TDC0 251 aa9.96□□□□□ -0.81
SMAD9-201ENST00000350148 COPS9Q8WXC6 57 aa9.96□□□□□ -0.81
SMAD9-201ENST00000350148 PGPA6NDG6 321 aa9.96□□□□□ -0.81
SMAD9-201ENST00000350148 IGHV2-70P01814 119 aa9.96□□□□□ -0.81
SMAD9-201ENST00000350148 REG1AP05451 166 aa9.96□□□□□ -0.81
SMAD9-201ENST00000350148 PAX2Q02962 417 aa9.96□□□□□ -0.81
SMAD9-201ENST00000350148 K7EM74 188 aa9.96□□□□□ -0.81
SMAD9-201ENST00000350148 HLA-DQA1P01909 254 aa9.96□□□□□ -0.81
SMAD9-201ENST00000350148 NPPCP23582 126 aa9.96□□□□□ -0.81
SMAD9-201ENST00000350148 OCIAD2Q56VL3 154 aa9.96□□□□□ -0.81
SMAD9-201ENST00000350148 FBXL7Q9UJT9 491 aa9.96□□□□□ -0.81
SMAD9-201ENST00000350148 TCRBV4S1A1TA0A5B7 111 aa9.96□□□□□ -0.82
SMAD9-201ENST00000350148 APOMO95445 188 aa9.96□□□□□ -0.82
SMAD9-201ENST00000350148 VMO1Q7Z5L0 202 aa9.96□□□□□ -0.82
SMAD9-201ENST00000350148 TUBA4BQ9H853 241 aa9.96□□□□□ -0.82
SMAD9-201ENST00000350148 PCDH15Q96QU1 1955 aa9.96□□□□□ -0.82
SMAD9-201ENST00000350148 TYMSP04818 313 aa9.96□□□□□ -0.82
SMAD9-201ENST00000350148 FCGR2BP31994 310 aaPredicted RBP9.96□□□□□ -0.82
SMAD9-201ENST00000350148 CLDND2Q8NHS1 167 aa9.96□□□□□ -0.82
SMAD9-201ENST00000350148 C15orf65H3BRN8 121 aa9.95□□□□□ -0.82
SMAD9-201ENST00000350148 SRP19P09132 144 aaKnown RBP9.95□□□□□ -0.82
SMAD9-201ENST00000350148 ZNF833PQ6ZTB9 187 aa9.95□□□□□ -0.82
SMAD9-201ENST00000350148 C11orf53Q8IXP5 236 aa9.95□□□□□ -0.82
SMAD9-201ENST00000350148 TMEM70Q9BUB7 260 aa9.95□□□□□ -0.82
SMAD9-201ENST00000350148 MRPL16Q9NX20 251 aaKnown RBP9.95□□□□□ -0.82
SMAD9-201ENST00000350148 WIPF3A6NGB9 483 aa9.95□□□□□ -0.82
SMAD9-201ENST00000350148 LINC00473A8K010 186 aa9.95□□□□□ -0.82
SMAD9-201ENST00000350148 SHISA9B4DS77 424 aa9.95□□□□□ -0.82
SMAD9-201ENST00000350148 LINC00305Q7Z4B0 112 aa9.95□□□□□ -0.82
SMAD9-201ENST00000350148 C5orf17Q8NAS9 161 aa9.95□□□□□ -0.82
SMAD9-201ENST00000350148 NEUROG1Q92886 237 aa9.95□□□□□ -0.82
SMAD9-201ENST00000350148 ZNF407Q9C0G0 2248 aa9.95□□□□□ -0.82
SMAD9-201ENST00000350148 WFDC1Q9HC57 220 aa9.95□□□□□ -0.82
SMAD9-201ENST00000350148 LHBP01229 141 aa9.95□□□□□ -0.82
SMAD9-201ENST00000350148 CXCL1P09341 107 aa9.95□□□□□ -0.82
SMAD9-201ENST00000350148 ZNF585BQ52M93 769 aa9.95□□□□□ -0.82
SMAD9-201ENST00000350148 LYPD2Q6UXB3 125 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms