RNA–Protein interactions for RNA: ENST00000349748.7

CAPN3-203, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-203ENST00000349748 PRO0461Q9UI25 63 aa8.7□□□□□ -1.02
CAPN3-203ENST00000349748 LOXL2Q9Y4K0 774 aa8.7□□□□□ -1.02
CAPN3-203ENST00000349748 NBEAQ8NFP9 2946 aa8.7□□□□□ -1.02
CAPN3-203ENST00000349748 ASXL3Q9C0F0 2248 aa8.7□□□□□ -1.02
CAPN3-203ENST00000349748 TRBV20-1A0A075B6N2 111 aa8.7□□□□□ -1.02
CAPN3-203ENST00000349748 SPTY2D1-AS1A0A0U1RR47 76 aa8.7□□□□□ -1.02
CAPN3-203ENST00000349748 TEX50A0A1B0GTY4 177 aa8.7□□□□□ -1.02
CAPN3-203ENST00000349748 A0A1B0GXF2 115 aa8.7□□□□□ -1.02
CAPN3-203ENST00000349748 M0QXV9 152 aa8.7□□□□□ -1.02
CAPN3-203ENST00000349748 MGST3O14880 152 aa8.7□□□□□ -1.02
CAPN3-203ENST00000349748 TMEM178AQ8NBL3 297 aa8.7□□□□□ -1.02
CAPN3-203ENST00000349748 PPDPFQ9H3Y8 114 aa8.7□□□□□ -1.02
CAPN3-203ENST00000349748 DHHO43323 396 aa8.7□□□□□ -1.02
CAPN3-203ENST00000349748 ZIC3O60481 467 aa8.7□□□□□ -1.02
CAPN3-203ENST00000349748 P0C879 139 aa8.7□□□□□ -1.02
CAPN3-203ENST00000349748 YPEL5P62699 121 aa8.7□□□□□ -1.02
CAPN3-203ENST00000349748 Q6AWC8 147 aa8.7□□□□□ -1.02
CAPN3-203ENST00000349748 NFE4Q86UQ8 179 aa8.7□□□□□ -1.02
CAPN3-203ENST00000349748 PRELID3AQ96N28 172 aa8.7□□□□□ -1.02
CAPN3-203ENST00000349748 SIGLEC8Q9NYZ4 499 aa8.7□□□□□ -1.02
CAPN3-203ENST00000349748 KIR2DS5A0A0G2JLQ3 304 aa8.69□□□□□ -1.02
CAPN3-203ENST00000349748 A0A0G2JNG1 304 aa8.69□□□□□ -1.02
CAPN3-203ENST00000349748 E9PLD3 99 aa8.69□□□□□ -1.02
CAPN3-203ENST00000349748 KIR2DS3K7RE56 304 aa8.69□□□□□ -1.02
CAPN3-203ENST00000349748 LTAP01374 205 aa8.69□□□□□ -1.02
CAPN3-203ENST00000349748 CFIP05156 583 aa8.69□□□□□ -1.02
CAPN3-203ENST00000349748 HBBP68871 147 aa8.69□□□□□ -1.02
CAPN3-203ENST00000349748 DIAPH2-AS1Q14236 149 aa8.69□□□□□ -1.02
CAPN3-203ENST00000349748 KIR2DS5Q14953 304 aa8.69□□□□□ -1.02
CAPN3-203ENST00000349748 MOB1BQ7L9L4 216 aa8.69□□□□□ -1.02
CAPN3-203ENST00000349748 FGFBP3Q8TAT2 258 aa8.69□□□□□ -1.02
CAPN3-203ENST00000349748 ST8SIA1Q92185 356 aa8.69□□□□□ -1.02
CAPN3-203ENST00000349748 C17orf98A8MV24 154 aa8.69□□□□□ -1.02
CAPN3-203ENST00000349748 IGLL5B9A064 214 aa8.69□□□□□ -1.02
CAPN3-203ENST00000349748 TMEM150CB9EJG8 249 aa8.69□□□□□ -1.02
CAPN3-203ENST00000349748 FNDC10F2Z333 226 aa8.69□□□□□ -1.02
CAPN3-203ENST00000349748 GFERP55789 205 aa8.69□□□□□ -1.02
CAPN3-203ENST00000349748 CCL7P80098 99 aa8.69□□□□□ -1.02
CAPN3-203ENST00000349748 DEFB133Q30KQ1 61 aa8.69□□□□□ -1.02
CAPN3-203ENST00000349748 SGK494Q96LW2 274 aa8.69□□□□□ -1.02
CAPN3-203ENST00000349748 PLEKHA3Q9HB20 300 aa8.69□□□□□ -1.02
CAPN3-203ENST00000349748 KNTC1P50748 2209 aa8.68□□□□□ -1.02
CAPN3-203ENST00000349748 IGHV3-15A0A0B4J1V0 119 aa8.68□□□□□ -1.02
CAPN3-203ENST00000349748 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.68□□□□□ -1.02
CAPN3-203ENST00000349748 FGF12P61328 243 aa8.68□□□□□ -1.02
CAPN3-203ENST00000349748 IGF2-ASQ6U949 168 aa8.68□□□□□ -1.02
CAPN3-203ENST00000349748 ZNF562Q6V9R5 426 aa8.68□□□□□ -1.02
CAPN3-203ENST00000349748 H2BFWTQ7Z2G1 175 aa8.68□□□□□ -1.02
CAPN3-203ENST00000349748 FAM169BQ8N8A8 192 aa8.68□□□□□ -1.02
CAPN3-203ENST00000349748 ZNF503Q96F45 646 aa8.68□□□□□ -1.02
CAPN3-203ENST00000349748 FGF23Q9GZV9 251 aaPredicted RBP8.68□□□□□ -1.02
CAPN3-203ENST00000349748 EP300Q09472 2414 aaPredicted RBP8.68□□□□□ -1.02
CAPN3-203ENST00000349748 FRYQ5TBA9 3013 aa8.68□□□□□ -1.02
CAPN3-203ENST00000349748 PATE3B3GLJ2 98 aa8.68□□□□□ -1.02
CAPN3-203ENST00000349748 MPDU1O75352 247 aa8.68□□□□□ -1.02
CAPN3-203ENST00000349748 FAM106CPP0CH98 169 aa8.68□□□□□ -1.02
CAPN3-203ENST00000349748 CRYGSP22914 178 aa8.68□□□□□ -1.02
CAPN3-203ENST00000349748 FXYD7P58549 80 aa8.68□□□□□ -1.02
CAPN3-203ENST00000349748 BRWD1-AS2P59051 145 aa8.68□□□□□ -1.02
CAPN3-203ENST00000349748 CACNG7P62955 275 aa8.68□□□□□ -1.02
CAPN3-203ENST00000349748 FAM106AQ4KMX7 169 aa8.68□□□□□ -1.02
CAPN3-203ENST00000349748 PGLYRP4Q96LB8 373 aa8.68□□□□□ -1.02
CAPN3-203ENST00000349748 KIR2DL4Q99706 377 aa8.68□□□□□ -1.02
CAPN3-203ENST00000349748 IGHV5-51A0A0C4DH38 117 aa8.67□□□□□ -1.02
CAPN3-203ENST00000349748 hADV38S2A0JD32 116 aa8.67□□□□□ -1.02
CAPN3-203ENST00000349748 ZFAND6Q6FIF0 208 aa8.67□□□□□ -1.02
CAPN3-203ENST00000349748 LCNL1Q6ZST4 164 aa8.67□□□□□ -1.02
CAPN3-203ENST00000349748 ABHD12Q8N2K0 398 aa8.67□□□□□ -1.02
CAPN3-203ENST00000349748 ZNF502Q8TBZ5 544 aa8.67□□□□□ -1.02
CAPN3-203ENST00000349748 OXGR1Q96P68 337 aa8.67□□□□□ -1.02
CAPN3-203ENST00000349748 VPREB3Q9UKI3 123 aa8.67□□□□□ -1.02
CAPN3-203ENST00000349748 A0A087WX48 190 aa8.67□□□□□ -1.02
CAPN3-203ENST00000349748 TRAV24A0A0B4J272 114 aa8.67□□□□□ -1.02
CAPN3-203ENST00000349748 A0A1W2PR77 199 aa8.67□□□□□ -1.02
CAPN3-203ENST00000349748 PRRG2O14669 202 aa8.67□□□□□ -1.02
CAPN3-203ENST00000349748 APOHP02749 345 aaPredicted RBP8.67□□□□□ -1.02
CAPN3-203ENST00000349748 PLP2Q04941 152 aa8.67□□□□□ -1.02
CAPN3-203ENST00000349748 MBNL2Q5VZF2 373 aaKnown RBP8.67□□□□□ -1.02
CAPN3-203ENST00000349748 MUC6Q6W4X9 2439 aa8.67□□□□□ -1.02
CAPN3-203ENST00000349748 KMT2EQ8IZD2 1858 aa8.67□□□□□ -1.02
CAPN3-203ENST00000349748 FER1L5A0AVI2 2057 aa8.67□□□□□ -1.02
CAPN3-203ENST00000349748 TRAV5A0A0B4J249 113 aa8.67□□□□□ -1.02
CAPN3-203ENST00000349748 GAGE12JA6NER3 117 aa8.67□□□□□ -1.02
CAPN3-203ENST00000349748 GAGE7O76087 117 aa8.67□□□□□ -1.02
CAPN3-203ENST00000349748 GAGE12FP0CL80 117 aa8.67□□□□□ -1.02
CAPN3-203ENST00000349748 GAGE12GP0CL81 117 aa8.67□□□□□ -1.02
CAPN3-203ENST00000349748 GAGE12IP0CL82 117 aa8.67□□□□□ -1.02
CAPN3-203ENST00000349748 GNG3P63215 75 aa8.67□□□□□ -1.02
CAPN3-203ENST00000349748 GAGE4Q13068 117 aa8.67□□□□□ -1.02
CAPN3-203ENST00000349748 HES3Q5TGS1 186 aa8.67□□□□□ -1.02
CAPN3-203ENST00000349748 TEX29Q8N6K0 151 aa8.67□□□□□ -1.02
CAPN3-203ENST00000349748 RIF1Q5UIP0 2472 aaKnown RBP8.67□□□□□ -1.02
CAPN3-203ENST00000349748 TCRBV4S1A1TA0A5B7 111 aa8.66□□□□□ -1.02
CAPN3-203ENST00000349748 FABP5P3A8MUU1 101 aa8.66□□□□□ -1.02
CAPN3-203ENST00000349748 ACP1P24666 158 aa8.66□□□□□ -1.02
CAPN3-203ENST00000349748 LOXL1Q08397 574 aaPredicted RBP8.66□□□□□ -1.02
CAPN3-203ENST00000349748 PTH2Q96A98 100 aa8.66□□□□□ -1.02
CAPN3-203ENST00000349748 HSD17B10Q99714 261 aaKnown RBP8.66□□□□□ -1.02
CAPN3-203ENST00000349748 AP5S1Q9NUS5 200 aa8.66□□□□□ -1.02
CAPN3-203ENST00000349748 KLF13Q9Y2Y9 288 aaPredicted RBP8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms