RNA–Protein interactions for RNA: ENST00000349228.8

TNFSF13-202, Transcript of TNF superfamily member 13, humanhuman

TSL 1 (best) BASIC

Gene TNFSF13, Length 2,036 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-202ENST00000349228 PRRC2CQ9Y520 2896 aaKnown RBP12.44□□□□□ -0.42
TNFSF13-202ENST00000349228 IZUMO1RA6ND01 250 aa12.44□□□□□ -0.42
TNFSF13-202ENST00000349228 K7ENP7 123 aa12.44□□□□□ -0.42
TNFSF13-202ENST00000349228 PEX7O00628 323 aa12.44□□□□□ -0.42
TNFSF13-202ENST00000349228 IGLV1-47P01700 117 aa12.44□□□□□ -0.42
TNFSF13-202ENST00000349228 MGST1P10620 155 aaKnown RBP12.44□□□□□ -0.42
TNFSF13-202ENST00000349228 C1orf194Q5T5A4 169 aa12.44□□□□□ -0.42
TNFSF13-202ENST00000349228 MORN5Q5VZ52 161 aa12.44□□□□□ -0.42
TNFSF13-202ENST00000349228 TMEM136Q6ZRR5 245 aa12.44□□□□□ -0.42
TNFSF13-202ENST00000349228 SPACA3Q8IXA5 215 aa12.44□□□□□ -0.42
TNFSF13-202ENST00000349228 FXYD5Q96DB9 178 aa12.44□□□□□ -0.42
TNFSF13-202ENST00000349228 CLUHP3Q96NS8 147 aa12.44□□□□□ -0.42
TNFSF13-202ENST00000349228 NAT8BQ9UHF3 227 aa12.44□□□□□ -0.42
TNFSF13-202ENST00000349228 PLCE1Q9P212 2302 aa12.43□□□□□ -0.42
TNFSF13-202ENST00000349228 TTC28Q96AY4 2481 aa12.43□□□□□ -0.42
TNFSF13-202ENST00000349228 YLPM1P49750 1951 aaKnown RBP12.43□□□□□ -0.42
TNFSF13-202ENST00000349228 IGHV2-26A0A0B4J1V2 119 aa12.43□□□□□ -0.42
TNFSF13-202ENST00000349228 NUPR1O60356 82 aa12.43□□□□□ -0.42
TNFSF13-202ENST00000349228 SSBP2P81877 361 aaPredicted RBP12.43□□□□□ -0.42
TNFSF13-202ENST00000349228 ST6GALNAC3Q8NDV1 305 aa12.43□□□□□ -0.42
TNFSF13-202ENST00000349228 SRSF8Q9BRL6 282 aaKnown RBP12.43□□□□□ -0.42
TNFSF13-202ENST00000349228 CLEC7AQ9BXN2 247 aa12.43□□□□□ -0.42
TNFSF13-202ENST00000349228 TP53TG3Q9ULZ0 132 aa12.43□□□□□ -0.42
TNFSF13-202ENST00000349228 INSIG2Q9Y5U4 225 aa12.43□□□□□ -0.42
TNFSF13-202ENST00000349228 CNOT1A5YKK6 2376 aaKnown RBP12.43□□□□□ -0.42
TNFSF13-202ENST00000349228 GRIFINA4D1Z8 144 aa12.42□□□□□ -0.42
TNFSF13-202ENST00000349228 COL8A2P25067 703 aa12.42□□□□□ -0.42
TNFSF13-202ENST00000349228 MYCNOSP40205 109 aa12.42□□□□□ -0.42
TNFSF13-202ENST00000349228 PLP1P60201 277 aa12.42□□□□□ -0.42
TNFSF13-202ENST00000349228 LINC00305Q7Z4B0 112 aa12.42□□□□□ -0.42
TNFSF13-202ENST00000349228 WIPF2Q8TF74 440 aaPredicted RBP12.42□□□□□ -0.42
TNFSF13-202ENST00000349228 C2orf88Q9BSF0 95 aa12.42□□□□□ -0.42
TNFSF13-202ENST00000349228 SIGLEC9Q9Y336 463 aa12.42□□□□□ -0.42
TNFSF13-202ENST00000349228 SERF1AO75920 110 aa12.42□□□□□ -0.42
TNFSF13-202ENST00000349228 BRS3P32247 399 aa12.42□□□□□ -0.42
TNFSF13-202ENST00000349228 FBXL19-AS1Q494R0 122 aa12.42□□□□□ -0.42
TNFSF13-202ENST00000349228 GRAMD2BQ96HH9 432 aa12.42□□□□□ -0.42
TNFSF13-202ENST00000349228 SERTAD4Q9NUC0 356 aa12.42□□□□□ -0.42
TNFSF13-202ENST00000349228 BUB1B-PAK6H3BSN5 160 aa12.41□□□□□ -0.42
TNFSF13-202ENST00000349228 HYPMO75409 117 aa12.41□□□□□ -0.42
TNFSF13-202ENST00000349228 PYYP10082 97 aa12.41□□□□□ -0.42
TNFSF13-202ENST00000349228 TNXAQ16473 311 aa12.41□□□□□ -0.42
TNFSF13-202ENST00000349228 TMEM183BQ1AE95 376 aa12.41□□□□□ -0.42
TNFSF13-202ENST00000349228 C8orf46Q8TAG6 207 aa12.41□□□□□ -0.42
TNFSF13-202ENST00000349228 MISP3Q96FF7 219 aa12.41□□□□□ -0.42
TNFSF13-202ENST00000349228 RITA1Q96K30 269 aa12.41□□□□□ -0.42
TNFSF13-202ENST00000349228 ZNF331Q9NQX6 463 aaPredicted RBP12.41□□□□□ -0.42
TNFSF13-202ENST00000349228 IGHV1-3A0A0C4DH29 117 aa12.4□□□□□ -0.42
TNFSF13-202ENST00000349228 A0A1B0GUS0 222 aa12.4□□□□□ -0.42
TNFSF13-202ENST00000349228 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.4□□□□□ -0.42
TNFSF13-202ENST00000349228 FXYD3Q14802 87 aa12.4□□□□□ -0.42
TNFSF13-202ENST00000349228 ZNF841Q6ZN19 808 aa12.4□□□□□ -0.42
TNFSF13-202ENST00000349228 MBD6Q96DN6 1003 aa12.4□□□□□ -0.42
TNFSF13-202ENST00000349228 TPSG1Q9NRR2 321 aa12.4□□□□□ -0.42
TNFSF13-202ENST00000349228 EPDR1Q9UM22 224 aa12.4□□□□□ -0.42
TNFSF13-202ENST00000349228 KLF12Q9Y4X4 402 aa12.4□□□□□ -0.42
TNFSF13-202ENST00000349228 KIR2DL5BA0A0G2JN68 375 aa12.4□□□□□ -0.42
TNFSF13-202ENST00000349228 KIR2DL5BA0A0G2JPC4 375 aa12.4□□□□□ -0.42
TNFSF13-202ENST00000349228 A0A1B0GV90 55 aa12.4□□□□□ -0.42
TNFSF13-202ENST00000349228 HIST1H1EP10412 219 aaKnown RBP12.4□□□□□ -0.42
TNFSF13-202ENST00000349228 LINC00310P59036 64 aa12.4□□□□□ -0.42
TNFSF13-202ENST00000349228 PPP1R27Q86WC6 154 aa12.4□□□□□ -0.42
TNFSF13-202ENST00000349228 KIR2DL5AQ8N109 375 aa12.4□□□□□ -0.42
TNFSF13-202ENST00000349228 SAMD10Q9BYL1 202 aa12.4□□□□□ -0.42
TNFSF13-202ENST00000349228 MRPL36Q9P0J6 103 aaKnown RBP12.4□□□□□ -0.42
TNFSF13-202ENST00000349228 F11RQ9Y624 299 aaKnown RBP12.4□□□□□ -0.42
TNFSF13-202ENST00000349228 TNCP24821 2201 aa12.39□□□□□ -0.43
TNFSF13-202ENST00000349228 C22orf46C9J442 243 aa12.39□□□□□ -0.43
TNFSF13-202ENST00000349228 UBE2G1P62253 170 aa12.39□□□□□ -0.43
TNFSF13-202ENST00000349228 USF2Q15853 346 aaPredicted RBP12.39□□□□□ -0.43
TNFSF13-202ENST00000349228 CYB5R2Q6BCY4 276 aa12.39□□□□□ -0.43
TNFSF13-202ENST00000349228 SIGLECL1Q8N7X8 197 aa12.39□□□□□ -0.43
TNFSF13-202ENST00000349228 ICE1Q9Y2F5 2266 aa12.39□□□□□ -0.43
TNFSF13-202ENST00000349228 ZNF705FA8MVS1 300 aaPredicted RBP12.38□□□□□ -0.43
TNFSF13-202ENST00000349228 REG1AP05451 166 aa12.38□□□□□ -0.43
TNFSF13-202ENST00000349228 NBEAP1P0C6P0 100 aa12.38□□□□□ -0.43
TNFSF13-202ENST00000349228 ZNF705DP0CH99 300 aaPredicted RBP12.38□□□□□ -0.43
TNFSF13-202ENST00000349228 ZNF705BP0CI00 300 aaPredicted RBP12.38□□□□□ -0.43
TNFSF13-202ENST00000349228 ORM2P19652 201 aa12.38□□□□□ -0.43
TNFSF13-202ENST00000349228 CA7P43166 264 aa12.38□□□□□ -0.43
TNFSF13-202ENST00000349228 HCP5Q6MZN7 132 aa12.38□□□□□ -0.43
TNFSF13-202ENST00000349228 UNQ6494/PRO21346Q6UXR6 183 aa12.38□□□□□ -0.43
TNFSF13-202ENST00000349228 OR1B1Q8NGR6 318 aa12.38□□□□□ -0.43
TNFSF13-202ENST00000349228 GNB4Q9HAV0 340 aa12.38□□□□□ -0.43
TNFSF13-202ENST00000349228 POLR3KQ9Y2Y1 108 aaPredicted RBP12.38□□□□□ -0.43
TNFSF13-202ENST00000349228 IGHV3-72A0A0B4J1Y9 119 aa12.38□□□□□ -0.43
TNFSF13-202ENST00000349228 PPIAL4CA0A0B4J2A2 164 aa12.38□□□□□ -0.43
TNFSF13-202ENST00000349228 APCSP02743 223 aa12.38□□□□□ -0.43
TNFSF13-202ENST00000349228 PPIAL4GP0DN37 164 aa12.38□□□□□ -0.43
TNFSF13-202ENST00000349228 PRR30Q53SZ7 412 aaPredicted RBP12.38□□□□□ -0.43
TNFSF13-202ENST00000349228 Q6ZWC4 215 aa12.38□□□□□ -0.43
TNFSF13-202ENST00000349228 MRPL52Q86TS9 123 aaKnown RBP12.38□□□□□ -0.43
TNFSF13-202ENST00000349228 MUC15Q8N387 334 aa12.38□□□□□ -0.43
TNFSF13-202ENST00000349228 RPEQ96AT9 228 aa12.38□□□□□ -0.43
TNFSF13-202ENST00000349228 TBX15Q96SF7 602 aa12.38□□□□□ -0.43
TNFSF13-202ENST00000349228 HSPB9Q9BQS6 159 aa12.38□□□□□ -0.43
TNFSF13-202ENST00000349228 CUL9Q8IWT3 2517 aa12.37□□□□□ -0.43
TNFSF13-202ENST00000349228 SLC25A5P05141 298 aaKnown RBP12.37□□□□□ -0.43
TNFSF13-202ENST00000349228 GPX1P07203 203 aa12.37□□□□□ -0.43
TNFSF13-202ENST00000349228 MFAP2P55001 183 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms