RNA–Protein interactions for RNA: ENST00000346213.8

RAB5C-201, Transcript of RAB5C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5C, Length 1,671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-201ENST00000346213 OR5T1Q8NG75 326 aa12.39□□□□□ -0.43
RAB5C-201ENST00000346213 OR2G3Q8NGZ4 309 aa12.39□□□□□ -0.43
RAB5C-201ENST00000346213 ZNF430Q9H8G1 570 aaPredicted RBP12.39□□□□□ -0.43
RAB5C-201ENST00000346213 PRNDQ9UKY0 176 aa12.39□□□□□ -0.43
RAB5C-201ENST00000346213 SLURP1P55000 103 aa12.38□□□□□ -0.43
RAB5C-201ENST00000346213 RPP30P78346 268 aaKnown RBP12.38□□□□□ -0.43
RAB5C-201ENST00000346213 PRSS8Q16651 343 aa12.38□□□□□ -0.43
RAB5C-201ENST00000346213 AKIRIN2Q53H80 203 aa12.38□□□□□ -0.43
RAB5C-201ENST00000346213 SPINK9Q5DT21 86 aa12.38□□□□□ -0.43
RAB5C-201ENST00000346213 SCGB1C1Q8TD33 95 aa12.38□□□□□ -0.43
RAB5C-201ENST00000346213 PINX1Q96BK5 328 aaKnown RBP12.38□□□□□ -0.43
RAB5C-201ENST00000346213 HIPK2Q9H2X6 1198 aa12.38□□□□□ -0.43
RAB5C-201ENST00000346213 ZNF257Q9Y2Q1 563 aa12.38□□□□□ -0.43
RAB5C-201ENST00000346213 C15orf62A8K5M9 175 aa12.38□□□□□ -0.43
RAB5C-201ENST00000346213 LGALS7P47929 136 aa12.38□□□□□ -0.43
RAB5C-201ENST00000346213 CAMLGP49069 296 aa12.38□□□□□ -0.43
RAB5C-201ENST00000346213 FLI1Q01543 452 aaPredicted RBP12.38□□□□□ -0.43
RAB5C-201ENST00000346213 OR8G2PQ6IF36 304 aa12.38□□□□□ -0.43
RAB5C-201ENST00000346213 SLC25A24Q6NUK1 477 aa12.38□□□□□ -0.43
RAB5C-201ENST00000346213 TMEM182Q6ZP80 229 aaPredicted RBP12.38□□□□□ -0.43
RAB5C-201ENST00000346213 OR10P1Q8NGE3 313 aa12.38□□□□□ -0.43
RAB5C-201ENST00000346213 MRAPQ8TCY5 172 aa12.38□□□□□ -0.43
RAB5C-201ENST00000346213 HRH4Q9H3N8 390 aa12.38□□□□□ -0.43
RAB5C-201ENST00000346213 CGB1A6NKQ9 187 aa12.37□□□□□ -0.43
RAB5C-201ENST00000346213 TSPAN4O14817 238 aa12.37□□□□□ -0.43
RAB5C-201ENST00000346213 KBTBD11O94819 623 aa12.37□□□□□ -0.43
RAB5C-201ENST00000346213 PRH1P02810 166 aa12.37□□□□□ -0.43
RAB5C-201ENST00000346213 OR1N2Q8NGR9 330 aa12.37□□□□□ -0.43
RAB5C-201ENST00000346213 DLX4Q92988 240 aaPredicted RBP12.37□□□□□ -0.43
RAB5C-201ENST00000346213 PSMG3Q9BT73 122 aaPredicted RBP12.37□□□□□ -0.43
RAB5C-201ENST00000346213 TMEM147Q9BVK8 224 aa12.37□□□□□ -0.43
RAB5C-201ENST00000346213 WDR61Q9GZS3 305 aaKnown RBP12.37□□□□□ -0.43
RAB5C-201ENST00000346213 HEYLQ9NQ87 328 aaPredicted RBP12.37□□□□□ -0.43
RAB5C-201ENST00000346213 FKBP11Q9NYL4 201 aa12.37□□□□□ -0.43
RAB5C-201ENST00000346213 TRBV12-3P01733 135 aa12.36□□□□□ -0.43
RAB5C-201ENST00000346213 LGALS1P09382 135 aaKnown RBP12.36□□□□□ -0.43
RAB5C-201ENST00000346213 OR4A5Q8NH83 315 aa12.36□□□□□ -0.43
RAB5C-201ENST00000346213 LINC00052Q96N35 136 aa12.36□□□□□ -0.43
RAB5C-201ENST00000346213 OR51B2Q9Y5P1 312 aa12.36□□□□□ -0.43
RAB5C-201ENST00000346213 RFNGQ9Y644 331 aa12.36□□□□□ -0.43
RAB5C-201ENST00000346213 TEX22C9J3V5 150 aa12.35□□□□□ -0.43
RAB5C-201ENST00000346213 TPPP2P59282 170 aa12.35□□□□□ -0.43
RAB5C-201ENST00000346213 TNXAQ16473 311 aa12.35□□□□□ -0.43
RAB5C-201ENST00000346213 VWC2Q2TAL6 325 aa12.35□□□□□ -0.43
RAB5C-201ENST00000346213 DPPA3Q6W0C5 159 aa12.35□□□□□ -0.43
RAB5C-201ENST00000346213 TEX45Q8NA69 505 aa12.35□□□□□ -0.43
RAB5C-201ENST00000346213 VSTM2AQ8TAG5 236 aa12.35□□□□□ -0.43
RAB5C-201ENST00000346213 TMEM167AQ8TBQ9 72 aa12.35□□□□□ -0.43
RAB5C-201ENST00000346213 SRSF12Q8WXF0 261 aaKnown RBP12.35□□□□□ -0.43
RAB5C-201ENST00000346213 IFNA10P01566 189 aa12.35□□□□□ -0.43
RAB5C-201ENST00000346213 HOXA1P49639 335 aaPredicted RBP12.35□□□□□ -0.43
RAB5C-201ENST00000346213 PRCDQ00LT1 54 aa12.35□□□□□ -0.43
RAB5C-201ENST00000346213 ZNF616Q08AN1 781 aa12.35□□□□□ -0.43
RAB5C-201ENST00000346213 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.35□□□□□ -0.43
RAB5C-201ENST00000346213 OR5B3Q8NH48 314 aa12.35□□□□□ -0.43
RAB5C-201ENST00000346213 ENY2Q9NPA8 101 aa12.35□□□□□ -0.43
RAB5C-201ENST00000346213 UQCC1Q9NVA1 299 aa12.35□□□□□ -0.43
RAB5C-201ENST00000346213 TIMM9Q9Y5J7 89 aa12.35□□□□□ -0.43
RAB5C-201ENST00000346213 SCO1O75880 301 aa12.34□□□□□ -0.43
RAB5C-201ENST00000346213 CNIH1O95406 144 aa12.34□□□□□ -0.43
RAB5C-201ENST00000346213 TRGV3P03979 118 aa12.34□□□□□ -0.43
RAB5C-201ENST00000346213 FHITP49789 147 aa12.34□□□□□ -0.43
RAB5C-201ENST00000346213 SERF2P84101 59 aa12.34□□□□□ -0.43
RAB5C-201ENST00000346213 AKR1C8PQ5T2L2 129 aa12.34□□□□□ -0.43
RAB5C-201ENST00000346213 FAM213BQ8TBF2 198 aa12.34□□□□□ -0.43
RAB5C-201ENST00000346213 RSG1Q9BU20 258 aa12.34□□□□□ -0.43
RAB5C-201ENST00000346213 GGACTQ9BVM4 153 aa12.34□□□□□ -0.43
RAB5C-201ENST00000346213 TEX50A0A1B0GTY4 177 aa12.33□□□□□ -0.44
RAB5C-201ENST00000346213 RAB11AP62491 216 aa12.33□□□□□ -0.44
RAB5C-201ENST00000346213 VMA21Q3ZAQ7 101 aa12.33□□□□□ -0.44
RAB5C-201ENST00000346213 LINC00469Q8N7U9 141 aa12.33□□□□□ -0.44
RAB5C-201ENST00000346213 BPIFCQ8NFQ6 507 aa12.33□□□□□ -0.44
RAB5C-201ENST00000346213 PRR25Q96S07 402 aa12.33□□□□□ -0.44
RAB5C-201ENST00000346213 UBE2L5PA0A1B0GUS4 154 aa12.32□□□□□ -0.44
RAB5C-201ENST00000346213 SEC14L6B5MCN3 397 aa12.32□□□□□ -0.44
RAB5C-201ENST00000346213 PRSS46E5RG02 174 aa12.32□□□□□ -0.44
RAB5C-201ENST00000346213 ATP5IP56385 69 aaPredicted RBP12.32□□□□□ -0.44
RAB5C-201ENST00000346213 RPL8P62917 257 aaKnown RBP12.32□□□□□ -0.44
RAB5C-201ENST00000346213 REC114Q7Z4M0 266 aa12.32□□□□□ -0.44
RAB5C-201ENST00000346213 TMEM170AQ8WVE7 144 aa12.32□□□□□ -0.44
RAB5C-201ENST00000346213 PLEKHA3Q9HB20 300 aa12.32□□□□□ -0.44
RAB5C-201ENST00000346213 SNCAP37840 140 aa12.32□□□□□ -0.44
RAB5C-201ENST00000346213 DLK1P80370 383 aa12.32□□□□□ -0.44
RAB5C-201ENST00000346213 SLC24A4Q8NFF2 622 aa12.32□□□□□ -0.44
RAB5C-201ENST00000346213 TMEM218A2RU14 115 aa12.31□□□□□ -0.44
RAB5C-201ENST00000346213 INS-IGF2F8WCM5 200 aa12.31□□□□□ -0.44
RAB5C-201ENST00000346213 LINC01619G3V211 115 aa12.31□□□□□ -0.44
RAB5C-201ENST00000346213 CD5P06127 495 aa12.31□□□□□ -0.44
RAB5C-201ENST00000346213 AREGP15514 252 aa12.31□□□□□ -0.44
RAB5C-201ENST00000346213 NPY1RP25929 384 aa12.31□□□□□ -0.44
RAB5C-201ENST00000346213 OR1L8Q8NGR8 309 aa12.31□□□□□ -0.44
RAB5C-201ENST00000346213 NDUFA4L2Q9NRX3 87 aa12.31□□□□□ -0.44
RAB5C-201ENST00000346213 ZNF355PQ9NSJ1 428 aa12.31□□□□□ -0.44
RAB5C-201ENST00000346213 DMRT1Q9Y5R6 373 aa12.31□□□□□ -0.44
RAB5C-201ENST00000346213 H2AFB1P0C5Y9 115 aa12.3□□□□□ -0.44
RAB5C-201ENST00000346213 FGF7P21781 194 aa12.3□□□□□ -0.44
RAB5C-201ENST00000346213 SRSF3P84103 164 aaKnown RBP12.3□□□□□ -0.44
RAB5C-201ENST00000346213 HINT2Q9BX68 163 aa12.3□□□□□ -0.44
RAB5C-201ENST00000346213 COMMD5Q9GZQ3 224 aa12.3□□□□□ -0.44
RAB5C-201ENST00000346213 WDR83OSQ9Y284 106 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms