RNA–Protein interactions for RNA: ENST00000345990.8

CSNK1G3-201, Transcript of casein kinase 1 gamma 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CSNK1G3, Length 4,635 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3-201ENST00000345990 RAB5AP20339 215 aa11□□□□□ -0.65
CSNK1G3-201ENST00000345990 HOXA4Q00056 320 aaPredicted RBP11□□□□□ -0.65
CSNK1G3-201ENST00000345990 DUX5Q96PT3 197 aa11□□□□□ -0.65
CSNK1G3-201ENST00000345990 AKAP6Q13023 2319 aa11□□□□□ -0.65
CSNK1G3-201ENST00000345990 TOMM40O96008 361 aa11□□□□□ -0.65
CSNK1G3-201ENST00000345990 YPEL3P61236 119 aaPredicted RBP11□□□□□ -0.65
CSNK1G3-201ENST00000345990 TRAPPC1Q9Y5R8 145 aa11□□□□□ -0.65
CSNK1G3-201ENST00000345990 WNK2Q9Y3S1 2297 aa11□□□□□ -0.65
CSNK1G3-201ENST00000345990 ISLRO14498 428 aa11□□□□□ -0.65
CSNK1G3-201ENST00000345990 IGLV1-47P01700 117 aa11□□□□□ -0.65
CSNK1G3-201ENST00000345990 NPBQ8NG41 125 aa11□□□□□ -0.65
CSNK1G3-201ENST00000345990 A0A1B0GW64 132 aa10.99□□□□□ -0.65
CSNK1G3-201ENST00000345990 STAG3L2P0CL84 134 aa10.99□□□□□ -0.65
CSNK1G3-201ENST00000345990 STAG3L3P0CL85 134 aa10.99□□□□□ -0.65
CSNK1G3-201ENST00000345990 CRIP3Q6Q6R5 217 aa10.99□□□□□ -0.65
CSNK1G3-201ENST00000345990 MIR17HGQ75NE6 70 aa10.99□□□□□ -0.65
CSNK1G3-201ENST00000345990 FMC1Q96HJ9 113 aa10.99□□□□□ -0.65
CSNK1G3-201ENST00000345990 ARHGAP21Q5T5U3 1957 aa10.99□□□□□ -0.65
CSNK1G3-201ENST00000345990 CRYBB3P26998 211 aa10.99□□□□□ -0.65
CSNK1G3-201ENST00000345990 FHITP49789 147 aa10.99□□□□□ -0.65
CSNK1G3-201ENST00000345990 NUTF2P61970 127 aaKnown RBP10.99□□□□□ -0.65
CSNK1G3-201ENST00000345990 NDUFB8O95169 186 aa10.99□□□□□ -0.65
CSNK1G3-201ENST00000345990 IGHV3-11P01762 117 aa10.99□□□□□ -0.65
CSNK1G3-201ENST00000345990 MT-ND6P03923 174 aa10.99□□□□□ -0.65
CSNK1G3-201ENST00000345990 LINC00205P59089 165 aa10.99□□□□□ -0.65
CSNK1G3-201ENST00000345990 IL15RAQ13261 267 aa10.99□□□□□ -0.65
CSNK1G3-201ENST00000345990 TMEM88Q6PEY1 159 aa10.99□□□□□ -0.65
CSNK1G3-201ENST00000345990 NAT8BQ9UHF3 227 aa10.99□□□□□ -0.65
CSNK1G3-201ENST00000345990 CDC42EP3Q9UKI2 254 aa10.99□□□□□ -0.65
CSNK1G3-201ENST00000345990 YLPM1P49750 1951 aaKnown RBP10.99□□□□□ -0.65
CSNK1G3-201ENST00000345990 TMEM189A5PLL7 270 aa10.99□□□□□ -0.65
CSNK1G3-201ENST00000345990 IGHV3-23P01764 117 aa10.99□□□□□ -0.65
CSNK1G3-201ENST00000345990 OR2D3Q8NGH3 330 aa10.98□□□□□ -0.65
CSNK1G3-201ENST00000345990 PARLQ9H300 379 aa10.98□□□□□ -0.65
CSNK1G3-201ENST00000345990 ZNRD1Q9P1U0 126 aa10.98□□□□□ -0.65
CSNK1G3-201ENST00000345990 CPAMD8Q8IZJ3 1885 aa10.98□□□□□ -0.65
CSNK1G3-201ENST00000345990 NDUFA6P56556 154 aa10.98□□□□□ -0.65
CSNK1G3-201ENST00000345990 ICAM4Q14773 271 aa10.98□□□□□ -0.65
CSNK1G3-201ENST00000345990 SMUG1Q53HV7 270 aa10.98□□□□□ -0.65
CSNK1G3-201ENST00000345990 IBA57Q5T440 356 aaKnown RBP10.98□□□□□ -0.65
CSNK1G3-201ENST00000345990 DDB2Q92466 427 aa10.98□□□□□ -0.65
CSNK1G3-201ENST00000345990 NAGKQ9UJ70 344 aa10.98□□□□□ -0.65
CSNK1G3-201ENST00000345990 RNF114Q9Y508 228 aa10.98□□□□□ -0.65
CSNK1G3-201ENST00000345990 PEX7O00628 323 aa10.98□□□□□ -0.65
CSNK1G3-201ENST00000345990 AREGP15514 252 aa10.98□□□□□ -0.65
CSNK1G3-201ENST00000345990 SIRPDQ9H106 197 aa10.98□□□□□ -0.65
CSNK1G3-201ENST00000345990 DUSP14O95147 198 aaKnown RBP10.97□□□□□ -0.65
CSNK1G3-201ENST00000345990 LYPD1Q8N2G4 141 aa10.97□□□□□ -0.65
CSNK1G3-201ENST00000345990 MGST2Q99735 147 aa10.97□□□□□ -0.65
CSNK1G3-201ENST00000345990 VPREB3Q9UKI3 123 aa10.97□□□□□ -0.65
CSNK1G3-201ENST00000345990 ELANEP08246 267 aa10.97□□□□□ -0.65
CSNK1G3-201ENST00000345990 PSG1P11464 419 aa10.97□□□□□ -0.65
CSNK1G3-201ENST00000345990 LMO4P61968 165 aa10.97□□□□□ -0.65
CSNK1G3-201ENST00000345990 CARHSP1Q9Y2V2 147 aaKnown RBP10.97□□□□□ -0.65
CSNK1G3-201ENST00000345990 CENPVL3A0A0U1RRI6 287 aa10.97□□□□□ -0.65
CSNK1G3-201ENST00000345990 FCN1O00602 326 aa10.97□□□□□ -0.65
CSNK1G3-201ENST00000345990 ATP6V0E1O15342 81 aa10.97□□□□□ -0.65
CSNK1G3-201ENST00000345990 IGHV3-35A0A0C4DH35 117 aa10.96□□□□□ -0.65
CSNK1G3-201ENST00000345990 AMY1AP04745 511 aa10.96□□□□□ -0.65
CSNK1G3-201ENST00000345990 TBX15Q96SF7 602 aa10.96□□□□□ -0.65
CSNK1G3-201ENST00000345990 PEF1Q9UBV8 284 aaKnown RBP10.96□□□□□ -0.65
CSNK1G3-201ENST00000345990 S4R3C0 116 aa10.96□□□□□ -0.65
CSNK1G3-201ENST00000345990 OR4C46A6NHA9 309 aa10.96□□□□□ -0.65
CSNK1G3-201ENST00000345990 SRP19P09132 144 aaKnown RBP10.96□□□□□ -0.65
CSNK1G3-201ENST00000345990 TFPI2P48307 235 aa10.96□□□□□ -0.65
CSNK1G3-201ENST00000345990 GOLT1AQ6ZVE7 132 aa10.96□□□□□ -0.65
CSNK1G3-201ENST00000345990 TTC9CQ8N5M4 171 aa10.96□□□□□ -0.65
CSNK1G3-201ENST00000345990 SYT8Q8NBV8 401 aa10.96□□□□□ -0.65
CSNK1G3-201ENST00000345990 INS-IGF2F8WCM5 200 aa10.96□□□□□ -0.66
CSNK1G3-201ENST00000345990 GATA2P23769 480 aaPredicted RBP10.96□□□□□ -0.66
CSNK1G3-201ENST00000345990 PAX9P55771 341 aa10.96□□□□□ -0.66
CSNK1G3-201ENST00000345990 ATG101Q9BSB4 218 aa10.96□□□□□ -0.66
CSNK1G3-201ENST00000345990 GPR61Q9BZJ8 451 aa10.96□□□□□ -0.66
CSNK1G3-201ENST00000345990 Q9H3A6 140 aa10.96□□□□□ -0.66
CSNK1G3-201ENST00000345990 PAX1P15863 534 aa10.96□□□□□ -0.66
CSNK1G3-201ENST00000345990 FAM24BQ8N5W8 94 aa10.96□□□□□ -0.66
CSNK1G3-201ENST00000345990 PTPRBP23467 1997 aa10.95□□□□□ -0.66
CSNK1G3-201ENST00000345990 ZNF841Q6ZN19 808 aa10.95□□□□□ -0.66
CSNK1G3-201ENST00000345990 OVOL1O14753 267 aa10.95□□□□□ -0.66
CSNK1G3-201ENST00000345990 RARRES2Q99969 163 aa10.95□□□□□ -0.66
CSNK1G3-201ENST00000345990 ZFP30Q9Y2G7 519 aa10.95□□□□□ -0.66
CSNK1G3-201ENST00000345990 FAM3BP58499 235 aaPredicted RBP10.95□□□□□ -0.66
CSNK1G3-201ENST00000345990 TMEM18Q96B42 140 aa10.95□□□□□ -0.66
CSNK1G3-201ENST00000345990 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.95□□□□□ -0.667e-7■■■□□ 18.1
CSNK1G3-201ENST00000345990 FA2HQ7L5A8 372 aa10.94□□□□□ -0.66
CSNK1G3-201ENST00000345990 TMEM86BQ8N661 226 aa10.94□□□□□ -0.66
CSNK1G3-201ENST00000345990 ZNF114Q8NC26 417 aa10.94□□□□□ -0.66
CSNK1G3-201ENST00000345990 ATP6V0BQ99437 205 aa10.94□□□□□ -0.66
CSNK1G3-201ENST00000345990 CEP295Q9C0D2 2601 aa10.94□□□□□ -0.66
CSNK1G3-201ENST00000345990 ZNF705FA8MVS1 300 aaPredicted RBP10.94□□□□□ -0.66
CSNK1G3-201ENST00000345990 SEC14L6B5MCN3 397 aa10.94□□□□□ -0.66
CSNK1G3-201ENST00000345990 OVOL3O00110 214 aa10.94□□□□□ -0.66
CSNK1G3-201ENST00000345990 ZNF705DP0CH99 300 aaPredicted RBP10.94□□□□□ -0.66
CSNK1G3-201ENST00000345990 ZNF705BP0CI00 300 aaPredicted RBP10.94□□□□□ -0.66
CSNK1G3-201ENST00000345990 FAM53AQ6NSI3 398 aaPredicted RBP10.94□□□□□ -0.66
CSNK1G3-201ENST00000345990 CIARTQ8N365 385 aaPredicted RBP10.94□□□□□ -0.66
CSNK1G3-201ENST00000345990 PIP4P2Q8N4L2 257 aa10.94□□□□□ -0.66
CSNK1G3-201ENST00000345990 TMEM116Q8NCL8 245 aa10.94□□□□□ -0.66
CSNK1G3-201ENST00000345990 SLC25A39Q9BZJ4 359 aaPredicted RBP10.94□□□□□ -0.66
CSNK1G3-201ENST00000345990 NCKAP5O14513 1909 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms