RNA–Protein interactions for RNA: ENST00000344113.8

SYNE2-202, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE2, Length 21,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-202ENST00000344113 EPPINO95925 133 aa3.15□□□□□ -1.91
SYNE2-202ENST00000344113 ZNF121P58317 390 aaPredicted RBP3.15□□□□□ -1.91
SYNE2-202ENST00000344113 WDR38Q5JTN6 314 aa3.15□□□□□ -1.91
SYNE2-202ENST00000344113 PHLDA3Q9Y5J5 127 aa3.15□□□□□ -1.91
SYNE2-202ENST00000344113 IGKV6D-21A0A0A0MT36 114 aa3.15□□□□□ -1.91
SYNE2-202ENST00000344113 IGFBP3P17936 291 aaPredicted RBP3.15□□□□□ -1.91
SYNE2-202ENST00000344113 HILPDAQ9Y5L2 63 aa3.15□□□□□ -1.91
SYNE2-202ENST00000344113 TCL1BO95988 128 aa3.15□□□□□ -1.91
SYNE2-202ENST00000344113 SCRT1Q9BWW7 348 aa3.15□□□□□ -1.91
SYNE2-202ENST00000344113 SMIM26A0A096LP01 95 aa3.15□□□□□ -1.91
SYNE2-202ENST00000344113 FOXB1Q99853 325 aa3.15□□□□□ -1.91
SYNE2-202ENST00000344113 ANKRD36CQ5JPF3 1778 aa3.15□□□□□ -1.91
SYNE2-202ENST00000344113 F6UB75 175 aa3.15□□□□□ -1.91
SYNE2-202ENST00000344113 CXCL1P09341 107 aa3.15□□□□□ -1.91
SYNE2-202ENST00000344113 TM2D1Q9BX74 207 aa3.15□□□□□ -1.91
SYNE2-202ENST00000344113 SHANK3Q9BYB0 1731 aa3.15□□□□□ -1.91
SYNE2-202ENST00000344113 H0YIG0 161 aa3.15□□□□□ -1.91
SYNE2-202ENST00000344113 NPPBP16860 134 aa3.15□□□□□ -1.91
SYNE2-202ENST00000344113 H3BT86 120 aa3.15□□□□□ -1.91
SYNE2-202ENST00000344113 RPL18Q07020 188 aaKnown RBP3.15□□□□□ -1.91
SYNE2-202ENST00000344113 CD69Q07108 199 aa3.15□□□□□ -1.91
SYNE2-202ENST00000344113 EIF4EBP1Q13541 118 aaPredicted RBP3.15□□□□□ -1.91
SYNE2-202ENST00000344113 UBE2E2Q96LR5 201 aa3.15□□□□□ -1.91
SYNE2-202ENST00000344113 C5orf66Q9H5L9 145 aa3.15□□□□□ -1.91
SYNE2-202ENST00000344113 LEPP41159 167 aa3.15□□□□□ -1.91
SYNE2-202ENST00000344113 TMEM141Q96I45 108 aa3.15□□□□□ -1.91
SYNE2-202ENST00000344113 TIMP1P01033 207 aa3.14□□□□□ -1.91
SYNE2-202ENST00000344113 Q6ZS52 159 aa3.14□□□□□ -1.91
SYNE2-202ENST00000344113 PSG8Q9UQ74 426 aa3.14□□□□□ -1.91
SYNE2-202ENST00000344113 A0A0B4J2E0 115 aa3.14□□□□□ -1.91
SYNE2-202ENST00000344113 A0A1B0GX12 115 aa3.14□□□□□ -1.91
SYNE2-202ENST00000344113 SMIM9A6NGZ8 99 aa3.14□□□□□ -1.91
SYNE2-202ENST00000344113 RPL8P62917 257 aaKnown RBP3.14□□□□□ -1.91
SYNE2-202ENST00000344113 SP5Q6BEB4 398 aaPredicted RBP3.14□□□□□ -1.91
SYNE2-202ENST00000344113 C6orf106Q9H6K1 298 aaPredicted RBP3.14□□□□□ -1.91
SYNE2-202ENST00000344113 TAF1LQ8IZX4 1826 aa3.14□□□□□ -1.91
SYNE2-202ENST00000344113 SP6Q3SY56 376 aa3.14□□□□□ -1.91
SYNE2-202ENST00000344113 IGHV4-39P01824 125 aa3.14□□□□□ -1.91
SYNE2-202ENST00000344113 PRSS41Q7RTY9 318 aa3.14□□□□□ -1.91
SYNE2-202ENST00000344113 GAPTQ8N292 157 aa3.14□□□□□ -1.91
SYNE2-202ENST00000344113 MAST2Q6P0Q8 1798 aa3.14□□□□□ -1.91
SYNE2-202ENST00000344113 TRAV24A0A0B4J272 114 aa3.14□□□□□ -1.91
SYNE2-202ENST00000344113 FFAR1O14842 300 aa3.14□□□□□ -1.91
SYNE2-202ENST00000344113 PGLYRP1O75594 196 aaPredicted RBP3.14□□□□□ -1.91
SYNE2-202ENST00000344113 ZNF672Q499Z4 452 aaPredicted RBP3.14□□□□□ -1.91
SYNE2-202ENST00000344113 VKORC1Q9BQB6 163 aa3.14□□□□□ -1.91
SYNE2-202ENST00000344113 A0A1W2PPV9 198 aa3.14□□□□□ -1.91
SYNE2-202ENST00000344113 LINC01553A4QN01 128 aa3.14□□□□□ -1.91
SYNE2-202ENST00000344113 PRNTQ86SH4 94 aa3.14□□□□□ -1.91
SYNE2-202ENST00000344113 RASL10BQ96S79 203 aa3.14□□□□□ -1.91
SYNE2-202ENST00000344113 RPL15P61313 204 aaKnown RBP3.14□□□□□ -1.91
SYNE2-202ENST00000344113 BMPERQ8N8U9 685 aa3.14□□□□□ -1.91
SYNE2-202ENST00000344113 RMI2Q96E14 147 aa3.14□□□□□ -1.91
SYNE2-202ENST00000344113 TRAV3A0A0B4J244 114 aa3.14□□□□□ -1.91
SYNE2-202ENST00000344113 CRYGAP11844 174 aa3.14□□□□□ -1.91
SYNE2-202ENST00000344113 MYOD1P15172 320 aa3.14□□□□□ -1.91
SYNE2-202ENST00000344113 ZNF793Q6ZN11 406 aa3.14□□□□□ -1.91
SYNE2-202ENST00000344113 C16orf52Q8NHV5 167 aa3.14□□□□□ -1.91
SYNE2-202ENST00000344113 HS3ST6Q96QI5 342 aa3.14□□□□□ -1.91
SYNE2-202ENST00000344113 GLIPR2Q9H4G4 154 aa3.14□□□□□ -1.91
SYNE2-202ENST00000344113 TMEM14DPA8MWL7 114 aa3.14□□□□□ -1.91
SYNE2-202ENST00000344113 FAM236AA0A1B0GUQ0 79 aa3.14□□□□□ -1.91
SYNE2-202ENST00000344113 FAM236BA0A1B0GV22 79 aa3.14□□□□□ -1.91
SYNE2-202ENST00000344113 EFNB3Q15768 340 aa3.14□□□□□ -1.91
SYNE2-202ENST00000344113 A0A087X0K7 114 aa3.14□□□□□ -1.91
SYNE2-202ENST00000344113 K7ERS5 55 aa3.14□□□□□ -1.91
SYNE2-202ENST00000344113 WNT9BO14905 357 aa3.14□□□□□ -1.91
SYNE2-202ENST00000344113 LINC00615Q96LM1 132 aaPredicted RBP3.14□□□□□ -1.91
SYNE2-202ENST00000344113 CARD19Q96LW7 228 aa3.14□□□□□ -1.91
SYNE2-202ENST00000344113 DEFB126Q9BYW3 111 aa3.14□□□□□ -1.91
SYNE2-202ENST00000344113 TNFRSF12AQ9NP84 129 aa3.14□□□□□ -1.91
SYNE2-202ENST00000344113 C4AP0C0L4 1744 aa3.14□□□□□ -1.91
SYNE2-202ENST00000344113 C4BP0C0L5 1744 aa3.14□□□□□ -1.91
SYNE2-202ENST00000344113 ZNF646O15015 1829 aaPredicted RBP3.14□□□□□ -1.91
SYNE2-202ENST00000344113 SUMO2P61956 95 aaKnown RBP3.14□□□□□ -1.91
SYNE2-202ENST00000344113 GNB2P62879 340 aa3.14□□□□□ -1.91
SYNE2-202ENST00000344113 ZAR1Q86SH2 424 aa3.14□□□□□ -1.91
SYNE2-202ENST00000344113 GNB4Q9HAV0 340 aa3.14□□□□□ -1.91
SYNE2-202ENST00000344113 Q6ZWC4 215 aa3.14□□□□□ -1.91
SYNE2-202ENST00000344113 PPLO60437 1756 aa3.14□□□□□ -1.91
SYNE2-202ENST00000344113 FAM159AQ6UWV7 190 aa3.14□□□□□ -1.91
SYNE2-202ENST00000344113 LINC00526Q96FQ7 95 aa3.14□□□□□ -1.91
SYNE2-202ENST00000344113 NXPH1P58417 271 aa3.13□□□□□ -1.91
SYNE2-202ENST00000344113 PRDM14Q9GZV8 571 aa3.13□□□□□ -1.91
SYNE2-202ENST00000344113 PILRBQ9UKJ0 227 aa3.13□□□□□ -1.91
SYNE2-202ENST00000344113 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.13□□□□□ -1.91
SYNE2-202ENST00000344113 LYPD1Q8N2G4 141 aa3.13□□□□□ -1.91
SYNE2-202ENST00000344113 FLYWCH2Q96CP2 140 aaKnown RBP3.13□□□□□ -1.91
SYNE2-202ENST00000344113 Q9Y3F1 56 aa3.13□□□□□ -1.91
SYNE2-202ENST00000344113 ADOQ96SZ5 270 aa3.13□□□□□ -1.91
SYNE2-202ENST00000344113 FAM208AQ9UK61 1670 aaKnown RBP3.13□□□□□ -1.91
SYNE2-202ENST00000344113 ZNFX1Q9P2E3 1918 aaKnown RBP3.13□□□□□ -1.91
SYNE2-202ENST00000344113 SPSB3Q6PJ21 355 aa3.13□□□□□ -1.91
SYNE2-202ENST00000344113 ATG4DQ86TL0 474 aaPredicted RBP3.13□□□□□ -1.91
SYNE2-202ENST00000344113 ADAMTSL3P82987 1691 aa3.13□□□□□ -1.91
SYNE2-202ENST00000344113 ZNF826PQ6ZT77 177 aa3.13□□□□□ -1.91
SYNE2-202ENST00000344113 LAMA4Q16363 1823 aa3.13□□□□□ -1.91
SYNE2-202ENST00000344113 FAM236DA0A1B0GTK5 79 aa3.13□□□□□ -1.91
SYNE2-202ENST00000344113 TNFSF14O43557 240 aa3.13□□□□□ -1.91
SYNE2-202ENST00000344113 FAM236CP0DP71 79 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms