RNA–Protein interactions for RNA: ENST00000343550.9

USF2-202, Transcript of upstream transcription factor 2, c-fos interacting, humanhuman

TSL 1 (best) BASIC

Gene USF2, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF2-202ENST00000343550 WRBO00258 174 aa13.54□□□□□ -0.24
USF2-202ENST00000343550 IGKV1-17P01599 117 aa13.54□□□□□ -0.24
USF2-202ENST00000343550 RND2P52198 227 aa13.54□□□□□ -0.24
USF2-202ENST00000343550 BTNL8Q6UX41 500 aa13.54□□□□□ -0.24
USF2-202ENST00000343550 NRARPQ7Z6K4 114 aa13.54□□□□□ -0.24
USF2-202ENST00000343550 TMEM61Q8N0U2 210 aa13.54□□□□□ -0.24
USF2-202ENST00000343550 ENKURQ8TC29 256 aa13.54□□□□□ -0.24
USF2-202ENST00000343550 WDR89Q96FK6 387 aaPredicted RBP13.54□□□□□ -0.24
USF2-202ENST00000343550 IL5P05113 134 aa13.53□□□□□ -0.24
USF2-202ENST00000343550 GPX4P36969 197 aaPredicted RBP13.53□□□□□ -0.24
USF2-202ENST00000343550 NKX2-1P43699 371 aaPredicted RBP13.53□□□□□ -0.24
USF2-202ENST00000343550 POLR2GP62487 172 aaKnown RBP eCLIP13.53□□□□□ -0.24
USF2-202ENST00000343550 IAH1Q2TAA2 248 aaPredicted RBP13.53□□□□□ -0.24
USF2-202ENST00000343550 C12orf45Q8N5I9 185 aaPredicted RBP13.53□□□□□ -0.24
USF2-202ENST00000343550 NPIPB3Q92617 1050 aa13.53□□□□□ -0.24
USF2-202ENST00000343550 SMPXQ9UHP9 88 aa13.53□□□□□ -0.24
USF2-202ENST00000343550 PUS1Q9Y606 427 aaKnown RBP eCLIP13.53□□□□□ -0.24
USF2-202ENST00000343550 DNAH7Q8WXX0 4024 aa13.53□□□□□ -0.24
USF2-202ENST00000343550 TRAV14DV4A0A0A6YYC5 116 aa13.52□□□□□ -0.25
USF2-202ENST00000343550 IGLC1P0CG04 106 aa13.52□□□□□ -0.25
USF2-202ENST00000343550 RAB11AP62491 216 aa13.52□□□□□ -0.25
USF2-202ENST00000343550 GUCA2BQ16661 112 aa13.52□□□□□ -0.25
USF2-202ENST00000343550 TIGITQ495A1 244 aa13.52□□□□□ -0.25
USF2-202ENST00000343550 ZFAND3Q9H8U3 227 aa13.52□□□□□ -0.25
USF2-202ENST00000343550 GSKIPQ9P0R6 139 aa13.52□□□□□ -0.25
USF2-202ENST00000343550 TENM2Q9NT68 2774 aa13.51□□□□□ -0.25
USF2-202ENST00000343550 TRAV25A0A0B4J276 109 aa13.51□□□□□ -0.25
USF2-202ENST00000343550 IGHV7-4-1A0A0J9YVY3 117 aa13.51□□□□□ -0.25
USF2-202ENST00000343550 RPP30P78346 268 aaKnown RBP13.51□□□□□ -0.25
USF2-202ENST00000343550 SLC16A13Q7RTY0 426 aa13.51□□□□□ -0.25
USF2-202ENST00000343550 GTSCR1Q86UQ5 136 aa13.51□□□□□ -0.25
USF2-202ENST00000343550 ZBTB8BQ8NAP8 495 aaPredicted RBP13.51□□□□□ -0.25
USF2-202ENST00000343550 OR1S2Q8NGQ3 325 aa13.51□□□□□ -0.25
USF2-202ENST00000343550 ACY3Q96HD9 319 aa13.51□□□□□ -0.25
USF2-202ENST00000343550 CCSO14618 274 aa13.5□□□□□ -0.25
USF2-202ENST00000343550 CHEK1O14757 476 aa13.5□□□□□ -0.25
USF2-202ENST00000343550 SCGB2A1O75556 95 aa13.5□□□□□ -0.25
USF2-202ENST00000343550 SCAF4O95104 1147 aaKnown RBP13.5□□□□□ -0.25
USF2-202ENST00000343550 OR10J1P30954 320 aa13.5□□□□□ -0.25
USF2-202ENST00000343550 DEFA1P59665 94 aa13.5□□□□□ -0.25
USF2-202ENST00000343550 DEFA3P59666 94 aa13.5□□□□□ -0.25
USF2-202ENST00000343550 GAMTQ14353 236 aa13.5□□□□□ -0.25
USF2-202ENST00000343550 SPANXN5Q5MJ07 72 aa13.5□□□□□ -0.25
USF2-202ENST00000343550 RBPMS2Q6ZRY4 209 aaKnown RBP13.5□□□□□ -0.25
USF2-202ENST00000343550 GINS3Q9BRX5 216 aa13.5□□□□□ -0.25
USF2-202ENST00000343550 RHPN1-AS1Q9BWJ2 59 aa13.5□□□□□ -0.25
USF2-202ENST00000343550 EDA2RQ9HAV5 297 aa13.5□□□□□ -0.25
USF2-202ENST00000343550 PAIP2BQ9ULR5 123 aaKnown RBP13.5□□□□□ -0.25
USF2-202ENST00000343550 IGHV3-49A0A0A0MS15 119 aa13.49□□□□□ -0.25
USF2-202ENST00000343550 PAX9P55771 341 aa13.49□□□□□ -0.25
USF2-202ENST00000343550 YPEL3P61236 119 aaPredicted RBP13.49□□□□□ -0.25
USF2-202ENST00000343550 HAGHQ16775 308 aa13.49□□□□□ -0.25
USF2-202ENST00000343550 SMIM8Q96KF7 97 aa13.49□□□□□ -0.25
USF2-202ENST00000343550 CD7P09564 240 aa13.49□□□□□ -0.25
USF2-202ENST00000343550 ZFAND6Q6FIF0 208 aa13.49□□□□□ -0.25
USF2-202ENST00000343550 Q8WTZ3 238 aa13.49□□□□□ -0.25
USF2-202ENST00000343550 RNF2Q99496 336 aa13.49□□□□□ -0.25
USF2-202ENST00000343550 NEURL2Q9BR09 285 aa13.49□□□□□ -0.25
USF2-202ENST00000343550 SPATA25Q9BR10 227 aa13.49□□□□□ -0.25
USF2-202ENST00000343550 MARVELD1Q9BSK0 173 aa13.49□□□□□ -0.25
USF2-202ENST00000343550 TUBA4BQ9H853 241 aa13.49□□□□□ -0.25
USF2-202ENST00000343550 PSENENQ9NZ42 101 aa13.49□□□□□ -0.25
USF2-202ENST00000343550 STRAPQ9Y3F4 350 aaKnown RBP13.49□□□□□ -0.25
USF2-202ENST00000343550 IGHV3OR16-13A0A075B7E8 117 aa13.48□□□□□ -0.25
USF2-202ENST00000343550 IGHV3-74A0A0B4J1X5 117 aa13.48□□□□□ -0.25
USF2-202ENST00000343550 FAM25EA8MYX2 175 aa13.48□□□□□ -0.25
USF2-202ENST00000343550 PRSS46E5RG02 174 aa13.48□□□□□ -0.25
USF2-202ENST00000343550 INMT-MINDY4F8WBC2 141 aa13.48□□□□□ -0.25
USF2-202ENST00000343550 H3BP45 60 aa13.48□□□□□ -0.25
USF2-202ENST00000343550 TSPAN4O14817 238 aa13.48□□□□□ -0.25
USF2-202ENST00000343550 SSSCA1O60232 199 aa13.48□□□□□ -0.25
USF2-202ENST00000343550 MBPP02686 304 aaPredicted RBP13.48□□□□□ -0.25
USF2-202ENST00000343550 APOHP02749 345 aaPredicted RBP13.48□□□□□ -0.25
USF2-202ENST00000343550 CD81P60033 236 aa13.48□□□□□ -0.25
USF2-202ENST00000343550 LAMTOR1Q6IAA8 161 aa13.48□□□□□ -0.25
USF2-202ENST00000343550 C5orf51A6NDU8 294 aa13.47□□□□□ -0.25
USF2-202ENST00000343550 SCGB1D2O95969 90 aa13.47□□□□□ -0.25
USF2-202ENST00000343550 NPPCP23582 126 aa13.47□□□□□ -0.25
USF2-202ENST00000343550 LILRB2Q8N423 598 aa13.47□□□□□ -0.25
USF2-202ENST00000343550 SLC35E1Q96K37 410 aa13.47□□□□□ -0.25
USF2-202ENST00000343550 C2orf50Q96LR7 162 aa13.47□□□□□ -0.25
USF2-202ENST00000343550 RAB40CQ96S21 281 aa13.47□□□□□ -0.25
USF2-202ENST00000343550 VSIRQ9H7M9 311 aa13.47□□□□□ -0.25
USF2-202ENST00000343550 GPN1Q9HCN4 374 aaPredicted RBP13.47□□□□□ -0.25
USF2-202ENST00000343550 LCE6AA0A183 80 aa13.46□□□□□ -0.25
USF2-202ENST00000343550 RD3LP0DJH9 198 aa13.46□□□□□ -0.25
USF2-202ENST00000343550 CRYBB3P26998 211 aa13.46□□□□□ -0.25
USF2-202ENST00000343550 FAM90A2PQ658T7 463 aa13.46□□□□□ -0.25
USF2-202ENST00000343550 SPAG8Q99932 426 aaPredicted RBP13.46□□□□□ -0.25
USF2-202ENST00000343550 RCL1Q9Y2P8 373 aaKnown RBP13.46□□□□□ -0.25
USF2-202ENST00000343550 IGKV1D-37A0A075B6S9 117 aa13.45□□□□□ -0.26
USF2-202ENST00000343550 PMS2P5A8MQ11 134 aa13.45□□□□□ -0.26
USF2-202ENST00000343550 SNRPGP15A8MWD9 76 aa13.45□□□□□ -0.26
USF2-202ENST00000343550 PRAF2O60831 178 aa13.45□□□□□ -0.26
USF2-202ENST00000343550 TOMM40O96008 361 aa13.45□□□□□ -0.26
USF2-202ENST00000343550 TAS2R30P59541 319 aa13.45□□□□□ -0.26
USF2-202ENST00000343550 GSG1LQ6UXU4 331 aa13.45□□□□□ -0.26
USF2-202ENST00000343550 ST8SIA2Q92186 375 aa13.45□□□□□ -0.26
USF2-202ENST00000343550 DYNC2H1Q8NCM8 4307 aaKnown RBP13.45□□□□□ -0.26
USF2-202ENST00000343550 C7orf66A4D0T2 115 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms