RNA–Protein interactions for RNA: ENST00000343060.4

HOXA1-201, Transcript of homeobox A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA1, Length 2,517 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-201ENST00000343060 LINC00322Q6ZN03 302 aaPredicted RBP7.81□□□□□ -1.16
HOXA1-201ENST00000343060 RBPMS2Q6ZRY4 209 aaKnown RBP7.81□□□□□ -1.16
HOXA1-201ENST00000343060 Q6ZT83 130 aa7.81□□□□□ -1.16
HOXA1-201ENST00000343060 LEAP2Q969E1 77 aa7.81□□□□□ -1.16
HOXA1-201ENST00000343060 LINC00574Q9H8X3 128 aa7.81□□□□□ -1.16
HOXA1-201ENST00000343060 CHTOPQ9Y3Y2 248 aaKnown RBP7.81□□□□□ -1.16
HOXA1-201ENST00000343060 TNCP24821 2201 aa7.81□□□□□ -1.16
HOXA1-201ENST00000343060 IGKV1D-37A0A075B6S9 117 aa7.81□□□□□ -1.16
HOXA1-201ENST00000343060 TCRBV4S1A1TA0A5B7 111 aa7.81□□□□□ -1.16
HOXA1-201ENST00000343060 C7orf71A4D174 169 aa7.81□□□□□ -1.16
HOXA1-201ENST00000343060 OVOL3O00110 214 aa7.81□□□□□ -1.16
HOXA1-201ENST00000343060 APOHP02749 345 aaPredicted RBP7.81□□□□□ -1.16
HOXA1-201ENST00000343060 NBEAP1P0C6P0 100 aa7.81□□□□□ -1.16
HOXA1-201ENST00000343060 FGF6P10767 208 aa7.81□□□□□ -1.16
HOXA1-201ENST00000343060 GNG5P63218 68 aa7.81□□□□□ -1.16
HOXA1-201ENST00000343060 TMEM30BQ3MIR4 351 aa7.81□□□□□ -1.16
HOXA1-201ENST00000343060 C16orf54Q6UWD8 224 aa7.81□□□□□ -1.16
HOXA1-201ENST00000343060 GATD1Q8NB37 220 aa7.81□□□□□ -1.16
HOXA1-201ENST00000343060 C1orf162Q8NEQ5 155 aaPredicted RBP7.81□□□□□ -1.16
HOXA1-201ENST00000343060 ITLN1Q8WWA0 313 aa7.81□□□□□ -1.16
HOXA1-201ENST00000343060 MEGF9Q9H1U4 602 aa7.81□□□□□ -1.16
HOXA1-201ENST00000343060 NDUFA4L2Q9NRX3 87 aa7.81□□□□□ -1.16
HOXA1-201ENST00000343060 CEP290O15078 2479 aa7.81□□□□□ -1.16
HOXA1-201ENST00000343060 IGLV1-44P01699 117 aa7.8□□□□□ -1.16
HOXA1-201ENST00000343060 SAA1P0DJI8 122 aaPredicted RBP7.8□□□□□ -1.16
HOXA1-201ENST00000343060 CT45A6P0DMU7 189 aa7.8□□□□□ -1.16
HOXA1-201ENST00000343060 CT45A5P0DMU8 189 aa7.8□□□□□ -1.16
HOXA1-201ENST00000343060 CT45A7P0DMV0 189 aa7.8□□□□□ -1.16
HOXA1-201ENST00000343060 CEACAM3P40198 252 aa7.8□□□□□ -1.16
HOXA1-201ENST00000343060 SSBP2P81877 361 aaPredicted RBP7.8□□□□□ -1.16
HOXA1-201ENST00000343060 PEAR1Q5VY43 1037 aaPredicted RBP7.8□□□□□ -1.16
HOXA1-201ENST00000343060 STXBP6Q8NFX7 210 aa7.8□□□□□ -1.16
HOXA1-201ENST00000343060 SARAFQ96BY9 339 aa7.8□□□□□ -1.16
HOXA1-201ENST00000343060 FMC1Q96HJ9 113 aa7.8□□□□□ -1.16
HOXA1-201ENST00000343060 ZNF576Q9H609 170 aa7.8□□□□□ -1.16
HOXA1-201ENST00000343060 TANC2Q9HCD6 1990 aa7.8□□□□□ -1.16
HOXA1-201ENST00000343060 DYSFO75923 2080 aa7.8□□□□□ -1.16
HOXA1-201ENST00000343060 HAX1O00165 279 aa7.8□□□□□ -1.16
HOXA1-201ENST00000343060 MOSP00540 346 aa7.8□□□□□ -1.16
HOXA1-201ENST00000343060 P01737 135 aa7.8□□□□□ -1.16
HOXA1-201ENST00000343060 IGKV1-16P04430 117 aa7.8□□□□□ -1.16
HOXA1-201ENST00000343060 CECR9P0C854 216 aa7.8□□□□□ -1.16
HOXA1-201ENST00000343060 PDPNQ86YL7 162 aa7.8□□□□□ -1.16
HOXA1-201ENST00000343060 FER1L6-AS1Q8NA97 138 aa7.8□□□□□ -1.16
HOXA1-201ENST00000343060 ZNRF1Q8ND25 227 aa7.8□□□□□ -1.16
HOXA1-201ENST00000343060 TRGV5A0A0B4J1U4 118 aa7.79□□□□□ -1.16
HOXA1-201ENST00000343060 C9orf118A6NHY6 69 aa7.79□□□□□ -1.16
HOXA1-201ENST00000343060 G3V4G9 280 aa7.79□□□□□ -1.16
HOXA1-201ENST00000343060 KLRC4-KLRK1H3BQV0 150 aa7.79□□□□□ -1.16
HOXA1-201ENST00000343060 H3BRM9 83 aa7.79□□□□□ -1.16
HOXA1-201ENST00000343060 SAP30O75446 220 aa7.79□□□□□ -1.16
HOXA1-201ENST00000343060 LHBP01229 141 aa7.79□□□□□ -1.16
HOXA1-201ENST00000343060 SLC25A5P05141 298 aaKnown RBP7.79□□□□□ -1.16
HOXA1-201ENST00000343060 CD24P25063 80 aa7.79□□□□□ -1.16
HOXA1-201ENST00000343060 TMEM97Q5BJF2 176 aa7.79□□□□□ -1.16
HOXA1-201ENST00000343060 BPIFA4PQ86YQ2 179 aa7.79□□□□□ -1.16
HOXA1-201ENST00000343060 OR2Z1Q8NG97 314 aa7.79□□□□□ -1.16
HOXA1-201ENST00000343060 OR10W1Q8NGF6 305 aa7.79□□□□□ -1.16
HOXA1-201ENST00000343060 NEU4Q8WWR8 484 aaPredicted RBP7.79□□□□□ -1.16
HOXA1-201ENST00000343060 PGLYRP4Q96LB8 373 aa7.79□□□□□ -1.16
HOXA1-201ENST00000343060 FZR1Q9UM11 496 aa7.79□□□□□ -1.16
HOXA1-201ENST00000343060 FAM186AA6NE01 2351 aa7.79□□□□□ -1.16
HOXA1-201ENST00000343060 IGHV3OR15-7A0A075B7D8 119 aa7.79□□□□□ -1.16
HOXA1-201ENST00000343060 GAGE10A6NGK3 116 aa7.79□□□□□ -1.16
HOXA1-201ENST00000343060 CFIP05156 583 aa7.79□□□□□ -1.16
HOXA1-201ENST00000343060 HTR1DP28221 377 aa7.79□□□□□ -1.16
HOXA1-201ENST00000343060 FABP6P51161 128 aa7.79□□□□□ -1.16
HOXA1-201ENST00000343060 FOXE3Q13461 319 aa7.79□□□□□ -1.16
HOXA1-201ENST00000343060 TMEM177Q53S58 311 aa7.79□□□□□ -1.16
HOXA1-201ENST00000343060 LINC00696Q6ZRV3 163 aa7.79□□□□□ -1.16
HOXA1-201ENST00000343060 SLC25A48Q6ZT89 311 aaKnown RBP7.79□□□□□ -1.16
HOXA1-201ENST00000343060 GTF2H5Q6ZYL4 71 aa7.79□□□□□ -1.16
HOXA1-201ENST00000343060 C5orf17Q8NAS9 161 aa7.79□□□□□ -1.16
HOXA1-201ENST00000343060 FAM222BQ8WU58 562 aa7.79□□□□□ -1.16
HOXA1-201ENST00000343060 JMJD8Q96S16 334 aa7.79□□□□□ -1.16
HOXA1-201ENST00000343060 ZNF747Q9BV97 191 aa7.79□□□□□ -1.16
HOXA1-201ENST00000343060 FNDC4Q9H6D8 234 aaPredicted RBP7.79□□□□□ -1.16
HOXA1-201ENST00000343060 K7EP34 96 aa7.78□□□□□ -1.16
HOXA1-201ENST00000343060 AGFG2O95081 481 aa7.78□□□□□ -1.16
HOXA1-201ENST00000343060 FAM87AP0C7U9 286 aa7.78□□□□□ -1.16
HOXA1-201ENST00000343060 ERHP84090 104 aaKnown RBP7.78□□□□□ -1.16
HOXA1-201ENST00000343060 PAX2Q02962 417 aa7.78□□□□□ -1.16
HOXA1-201ENST00000343060 PRR31Q5SQ13 230 aa7.78□□□□□ -1.16
HOXA1-201ENST00000343060 NEGR1Q7Z3B1 354 aa7.78□□□□□ -1.16
HOXA1-201ENST00000343060 OR1B1Q8NGR6 318 aa7.78□□□□□ -1.16
HOXA1-201ENST00000343060 OSR1Q8TAX0 266 aaPredicted RBP7.78□□□□□ -1.16
HOXA1-201ENST00000343060 DEFB127Q9H1M4 99 aa7.78□□□□□ -1.16
HOXA1-201ENST00000343060 TEX45Q8NA69 505 aa7.78□□□□□ -1.16
HOXA1-201ENST00000343060 PERPQ96FX8 193 aa7.78□□□□□ -1.16
HOXA1-201ENST00000343060 TMUB1Q9BVT8 246 aa7.78□□□□□ -1.16
HOXA1-201ENST00000343060 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.77□□□□□ -1.17
HOXA1-201ENST00000343060 PGPA6NDG6 321 aa7.77□□□□□ -1.17
HOXA1-201ENST00000343060 M0R296 226 aa7.77□□□□□ -1.17
HOXA1-201ENST00000343060 CHEK1O14757 476 aa7.77□□□□□ -1.17
HOXA1-201ENST00000343060 HOXC12P31275 282 aa7.77□□□□□ -1.17
HOXA1-201ENST00000343060 ZNF833PQ6ZTB9 187 aa7.77□□□□□ -1.17
HOXA1-201ENST00000343060 LINC00305Q7Z4B0 112 aa7.77□□□□□ -1.17
HOXA1-201ENST00000343060 OR1N2Q8NGR9 330 aa7.77□□□□□ -1.17
HOXA1-201ENST00000343060 NPIPB3Q92617 1050 aa7.77□□□□□ -1.17
HOXA1-201ENST00000343060 RPUSD1Q9UJJ7 312 aaKnown RBP7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms