RNA–Protein interactions for RNA: ENST00000343017.11

SNX18-202, Transcript of sorting nexin 18, humanhuman

BASIC

Gene SNX18, Length 3,140 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18-202ENST00000343017 IQCF6A8MYZ5 107 aa12.38□□□□□ -0.43
SNX18-202ENST00000343017 ZNF329Q86UD4 541 aa12.38□□□□□ -0.43
SNX18-202ENST00000343017 BLNKQ8WV28 456 aa12.38□□□□□ -0.43
SNX18-202ENST00000343017 HILPDAQ9Y5L2 63 aa12.38□□□□□ -0.43
SNX18-202ENST00000343017 LAMA5O15230 3695 aa12.38□□□□□ -0.43
SNX18-202ENST00000343017 A0A1B0GXF2 115 aa12.37□□□□□ -0.43
SNX18-202ENST00000343017 PLXNB1O43157 2135 aa12.37□□□□□ -0.43
SNX18-202ENST00000343017 RASL11AQ6T310 242 aa12.37□□□□□ -0.43
SNX18-202ENST00000343017 TMEM116Q8NCL8 245 aa12.37□□□□□ -0.43
SNX18-202ENST00000343017 OR4S2Q8NH73 311 aa12.37□□□□□ -0.43
SNX18-202ENST00000343017 GTSF1Q8WW33 167 aa12.37□□□□□ -0.43
SNX18-202ENST00000343017 DDB2Q92466 427 aa12.37□□□□□ -0.43
SNX18-202ENST00000343017 JMJD8Q96S16 334 aa12.37□□□□□ -0.43
SNX18-202ENST00000343017 PEF1Q9UBV8 284 aaKnown RBP12.37□□□□□ -0.43
SNX18-202ENST00000343017 CUL9Q8IWT3 2517 aa12.37□□□□□ -0.43
SNX18-202ENST00000343017 ARF6P62330 175 aa12.37□□□□□ -0.43
SNX18-202ENST00000343017 C2orf91Q6ZV80 131 aa12.37□□□□□ -0.43
SNX18-202ENST00000343017 DEFB127Q9H1M4 99 aa12.37□□□□□ -0.43
SNX18-202ENST00000343017 SP9P0CG40 484 aa12.37□□□□□ -0.43
SNX18-202ENST00000343017 SAA2P0DJI9 122 aaPredicted RBP12.37□□□□□ -0.43
SNX18-202ENST00000343017 CT45A1Q5HYN5 189 aa12.37□□□□□ -0.43
SNX18-202ENST00000343017 Q71RC1 249 aaPredicted RBP12.37□□□□□ -0.43
SNX18-202ENST00000343017 CT45A3Q8NHU0 189 aa12.37□□□□□ -0.43
SNX18-202ENST00000343017 NANOS1Q8WY41 292 aaKnown RBP12.37□□□□□ -0.43
SNX18-202ENST00000343017 FAM173AQ9BQD7 235 aa12.37□□□□□ -0.43
SNX18-202ENST00000343017 TMUB1Q9BVT8 246 aa12.37□□□□□ -0.43
SNX18-202ENST00000343017 ZNF430Q9H8G1 570 aaPredicted RBP12.37□□□□□ -0.43
SNX18-202ENST00000343017 FOXA2Q9Y261 457 aaPredicted RBP12.37□□□□□ -0.43
SNX18-202ENST00000343017 ZNF318Q5VUA4 2279 aa12.37□□□□□ -0.43
SNX18-202ENST00000343017 SMG1Q96Q15 3661 aaKnown RBP12.36□□□□□ -0.43
SNX18-202ENST00000343017 SRRM4A7MD48 611 aaKnown RBP12.36□□□□□ -0.43
SNX18-202ENST00000343017 NTN3O00634 580 aaPredicted RBP12.36□□□□□ -0.43
SNX18-202ENST00000343017 TNFSF15O95150 251 aa12.36□□□□□ -0.43
SNX18-202ENST00000343017 NCR2O95944 276 aa12.36□□□□□ -0.43
SNX18-202ENST00000343017 HBBP68871 147 aa12.36□□□□□ -0.43
SNX18-202ENST00000343017 C1orf185Q5T7R7 199 aa12.36□□□□□ -0.43
SNX18-202ENST00000343017 DHRS13Q6UX07 377 aa12.36□□□□□ -0.43
SNX18-202ENST00000343017 SMIM12Q96EX1 92 aa12.36□□□□□ -0.43
SNX18-202ENST00000343017 H3BUT2 72 aa12.36□□□□□ -0.43
SNX18-202ENST00000343017 TIMM8AO60220 97 aaPredicted RBP12.36□□□□□ -0.43
SNX18-202ENST00000343017 IGKV1-16P04430 117 aa12.36□□□□□ -0.43
SNX18-202ENST00000343017 HIST1H1AQ02539 215 aaPredicted RBP12.36□□□□□ -0.43
SNX18-202ENST00000343017 MRPL49Q13405 166 aaKnown RBP12.36□□□□□ -0.43
SNX18-202ENST00000343017 FAM201AQ5SY85 155 aa12.36□□□□□ -0.43
SNX18-202ENST00000343017 FAM231DQ6ZW35 169 aa12.36□□□□□ -0.43
SNX18-202ENST00000343017 RAB37Q96AX2 223 aa12.36□□□□□ -0.43
SNX18-202ENST00000343017 PAXXQ9BUH6 204 aa12.36□□□□□ -0.43
SNX18-202ENST00000343017 OTOGLQ3ZCN5 2332 aa12.36□□□□□ -0.43
SNX18-202ENST00000343017 IGKV1D-17A0A075B6S4 117 aa12.35□□□□□ -0.43
SNX18-202ENST00000343017 MAP1LC3CQ9BXW4 147 aa12.35□□□□□ -0.43
SNX18-202ENST00000343017 HTR1DP28221 377 aa12.35□□□□□ -0.43
SNX18-202ENST00000343017 SMIM21Q3B7S5 101 aa12.35□□□□□ -0.43
SNX18-202ENST00000343017 SPRNQ5BIV9 151 aa12.35□□□□□ -0.43
SNX18-202ENST00000343017 PRR7Q8TB68 274 aa12.35□□□□□ -0.43
SNX18-202ENST00000343017 C7orf69Q9H7B7 122 aa12.35□□□□□ -0.43
SNX18-202ENST00000343017 HIST1H1EP10412 219 aaKnown RBP12.35□□□□□ -0.43
SNX18-202ENST00000343017 PATE2Q6UY27 113 aa12.35□□□□□ -0.43
SNX18-202ENST00000343017 BHLHA15Q7RTS1 189 aaPredicted RBP12.35□□□□□ -0.43
SNX18-202ENST00000343017 CXXC4Q9H2H0 198 aa12.35□□□□□ -0.43
SNX18-202ENST00000343017 TANC2Q9HCD6 1990 aa12.34□□□□□ -0.43
SNX18-202ENST00000343017 B4GALT7Q9UBV7 327 aa12.34□□□□□ -0.43
SNX18-202ENST00000343017 JPT1Q9UK76 154 aa12.34□□□□□ -0.43
SNX18-202ENST00000343017 TEX50A0A1B0GTY4 177 aa12.34□□□□□ -0.43
SNX18-202ENST00000343017 MOSP00540 346 aa12.34□□□□□ -0.43
SNX18-202ENST00000343017 ASCL2Q99929 193 aa12.34□□□□□ -0.43
SNX18-202ENST00000343017 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.33□□□□□ -0.44
SNX18-202ENST00000343017 PSMB11A5LHX3 300 aa12.33□□□□□ -0.44
SNX18-202ENST00000343017 SLC25A5P05141 298 aaKnown RBP12.33□□□□□ -0.44
SNX18-202ENST00000343017 IGHV1-2P23083 117 aa12.33□□□□□ -0.44
SNX18-202ENST00000343017 TMEM97Q5BJF2 176 aa12.33□□□□□ -0.44
SNX18-202ENST00000343017 DUX4L9Q6RFH8 374 aaPredicted RBP12.33□□□□□ -0.44
SNX18-202ENST00000343017 BPIFA4PQ86YQ2 179 aa12.33□□□□□ -0.44
SNX18-202ENST00000343017 OR1N2Q8NGR9 330 aa12.33□□□□□ -0.44
SNX18-202ENST00000343017 H1FXQ92522 213 aaKnown RBP12.33□□□□□ -0.44
SNX18-202ENST00000343017 COX7A2P2O60397 106 aa12.33□□□□□ -0.44
SNX18-202ENST00000343017 NBEAP1P0C6P0 100 aa12.33□□□□□ -0.44
SNX18-202ENST00000343017 RND1Q92730 232 aa12.33□□□□□ -0.44
SNX18-202ENST00000343017 PGPA6NDG6 321 aa12.33□□□□□ -0.44
SNX18-202ENST00000343017 E7EUB6 86 aa12.33□□□□□ -0.44
SNX18-202ENST00000343017 HLA-DRB1P01911 266 aa12.33□□□□□ -0.44
SNX18-202ENST00000343017 PAX2Q02962 417 aa12.33□□□□□ -0.44
SNX18-202ENST00000343017 C5orf17Q8NAS9 161 aa12.33□□□□□ -0.44
SNX18-202ENST00000343017 G3V4G9 280 aa12.32□□□□□ -0.44
SNX18-202ENST00000343017 RNASE2P10153 161 aaKnown RBP12.32□□□□□ -0.44
SNX18-202ENST00000343017 ABHD17BQ5VST6 288 aa12.32□□□□□ -0.44
SNX18-202ENST00000343017 UFSP1Q6NVU6 142 aa12.32□□□□□ -0.44
SNX18-202ENST00000343017 CHCHD1Q96BP2 118 aaKnown RBP12.32□□□□□ -0.44
SNX18-202ENST00000343017 CALYQ9NYX4 217 aa12.32□□□□□ -0.44
SNX18-202ENST00000343017 C1RLQ9NZP8 487 aa12.32□□□□□ -0.44
SNX18-202ENST00000343017 FXYD7P58549 80 aa12.32□□□□□ -0.44
SNX18-202ENST00000343017 TMEM177Q53S58 311 aa12.32□□□□□ -0.44
SNX18-202ENST00000343017 C6orf15Q6UXA7 325 aaPredicted RBP12.32□□□□□ -0.44
SNX18-202ENST00000343017 OR2Z1Q8NG97 314 aa12.32□□□□□ -0.44
SNX18-202ENST00000343017 LIPFP07098 398 aa12.31□□□□□ -0.44
SNX18-202ENST00000343017 FAM106CPP0CH98 169 aa12.31□□□□□ -0.44
SNX18-202ENST00000343017 COX8AP10176 69 aa12.31□□□□□ -0.44
SNX18-202ENST00000343017 PRCDQ00LT1 54 aa12.31□□□□□ -0.44
SNX18-202ENST00000343017 FAM106AQ4KMX7 169 aa12.31□□□□□ -0.44
SNX18-202ENST00000343017 C10orf113Q5VZT2 155 aa12.31□□□□□ -0.44
SNX18-202ENST00000343017 NPIPB3Q92617 1050 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms