RNA–Protein interactions for RNA: ENST00000342415.5

SNRNP48-201, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP48, Length 4,173 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-201ENST00000342415 TNFSF13O75888 250 aa10.22□□□□□ -0.77
SNRNP48-201ENST00000342415 HBBP68871 147 aa10.22□□□□□ -0.77
SNRNP48-201ENST00000342415 COTL1Q14019 142 aa10.22□□□□□ -0.77
SNRNP48-201ENST00000342415 Q6ZR03 302 aa10.22□□□□□ -0.77
SNRNP48-201ENST00000342415 IGHV3-49A0A0A0MS15 119 aa10.22□□□□□ -0.77
SNRNP48-201ENST00000342415 C3orf79P0CE67 100 aa10.22□□□□□ -0.77
SNRNP48-201ENST00000342415 NPPCP23582 126 aa10.22□□□□□ -0.77
SNRNP48-201ENST00000342415 C19orf35Q6ZS72 473 aa10.22□□□□□ -0.77
SNRNP48-201ENST00000342415 TRBV9A0A0B4J1U6 114 aa10.22□□□□□ -0.77
SNRNP48-201ENST00000342415 C1orf185Q5T7R7 199 aa10.22□□□□□ -0.77
SNRNP48-201ENST00000342415 SFXN3Q9BWM7 321 aa10.22□□□□□ -0.77
SNRNP48-201ENST00000342415 HSPB8Q9UJY1 196 aa10.22□□□□□ -0.77
SNRNP48-201ENST00000342415 CDC42EP3Q9UKI2 254 aa10.22□□□□□ -0.77
SNRNP48-201ENST00000342415 IL4P05112 153 aa10.22□□□□□ -0.77
SNRNP48-201ENST00000342415 TWIST1Q15672 202 aa10.22□□□□□ -0.77
SNRNP48-201ENST00000342415 WDR31Q8NA23 367 aa10.22□□□□□ -0.77
SNRNP48-201ENST00000342415 SCRT1Q9BWW7 348 aa10.22□□□□□ -0.77
SNRNP48-201ENST00000342415 CD3EP07766 207 aa10.21□□□□□ -0.77
SNRNP48-201ENST00000342415 CD69Q07108 199 aa10.21□□□□□ -0.77
SNRNP48-201ENST00000342415 Q6ZWC4 215 aa10.21□□□□□ -0.77
SNRNP48-201ENST00000342415 BEND2Q8NDZ0 799 aa10.21□□□□□ -0.77
SNRNP48-201ENST00000342415 DLEU1O43261 78 aa10.21□□□□□ -0.78
SNRNP48-201ENST00000342415 SS18L1O75177 396 aaPredicted RBP10.21□□□□□ -0.78
SNRNP48-201ENST00000342415 ZNF134P52741 427 aa10.21□□□□□ -0.78
SNRNP48-201ENST00000342415 FXYD7P58549 80 aa10.21□□□□□ -0.78
SNRNP48-201ENST00000342415 ECSCRQ19T08 205 aa10.21□□□□□ -0.78
SNRNP48-201ENST00000342415 IZUMO1RA6ND01 250 aa10.21□□□□□ -0.78
SNRNP48-201ENST00000342415 SH2D7A6NKC9 451 aaPredicted RBP10.21□□□□□ -0.78
SNRNP48-201ENST00000342415 NPSP0C0P6 89 aa10.21□□□□□ -0.78
SNRNP48-201ENST00000342415 CD40P25942 277 aa10.21□□□□□ -0.78
SNRNP48-201ENST00000342415 TIMM23BQ5SRD1 257 aa10.21□□□□□ -0.78
SNRNP48-201ENST00000342415 GTF2H5Q6ZYL4 71 aa10.21□□□□□ -0.78
SNRNP48-201ENST00000342415 NUDT10Q8NFP7 164 aa10.21□□□□□ -0.78
SNRNP48-201ENST00000342415 NUDT11Q96G61 164 aa10.21□□□□□ -0.78
SNRNP48-201ENST00000342415 GUCD1Q96NT3 240 aa10.21□□□□□ -0.78
SNRNP48-201ENST00000342415 NAA38Q9BRA0 125 aaKnown RBP10.21□□□□□ -0.78
SNRNP48-201ENST00000342415 CKS2P33552 79 aa10.2□□□□□ -0.78
SNRNP48-201ENST00000342415 AP5S1Q9NUS5 200 aa10.2□□□□□ -0.78
SNRNP48-201ENST00000342415 FBXL7Q9UJT9 491 aa10.2□□□□□ -0.78
SNRNP48-201ENST00000342415 FRMD6-AS1P0C7T7 363 aa10.2□□□□□ -0.78
SNRNP48-201ENST00000342415 ODF3L1Q8IXM7 274 aa10.2□□□□□ -0.78
SNRNP48-201ENST00000342415 TMEM116Q8NCL8 245 aa10.2□□□□□ -0.78
SNRNP48-201ENST00000342415 RNF138Q8WVD3 245 aa10.2□□□□□ -0.78
SNRNP48-201ENST00000342415 DIRC2Q96SL1 478 aa10.2□□□□□ -0.78
SNRNP48-201ENST00000342415 OSTCQ9NRP0 149 aa10.2□□□□□ -0.78
SNRNP48-201ENST00000342415 SONP18583 2426 aaKnown RBP10.2□□□□□ -0.78
SNRNP48-201ENST00000342415 GPX1P07203 203 aa10.2□□□□□ -0.78
SNRNP48-201ENST00000342415 MC5RP33032 325 aa10.2□□□□□ -0.78
SNRNP48-201ENST00000342415 CA7P43166 264 aa10.2□□□□□ -0.78
SNRNP48-201ENST00000342415 TDGF1P3P51864 188 aa10.2□□□□□ -0.78
SNRNP48-201ENST00000342415 MBNL2Q5VZF2 373 aaKnown RBP10.2□□□□□ -0.78
SNRNP48-201ENST00000342415 Q6ZVH6 145 aa10.2□□□□□ -0.78
SNRNP48-201ENST00000342415 RPRMLQ8N4K4 120 aa10.2□□□□□ -0.78
SNRNP48-201ENST00000342415 OSR1Q8TAX0 266 aaPredicted RBP10.2□□□□□ -0.78
SNRNP48-201ENST00000342415 GNB1LQ9BYB4 327 aa10.2□□□□□ -0.78
SNRNP48-201ENST00000342415 GP6Q9HCN6 339 aa10.2□□□□□ -0.78
SNRNP48-201ENST00000342415 SZT2Q5T011 3432 aa10.19□□□□□ -0.78
SNRNP48-201ENST00000342415 GAGE10A6NGK3 116 aa10.19□□□□□ -0.78
SNRNP48-201ENST00000342415 NPIPB11E5RHQ5 1161 aa10.19□□□□□ -0.78
SNRNP48-201ENST00000342415 CD59P13987 128 aa10.19□□□□□ -0.78
SNRNP48-201ENST00000342415 PRCDQ00LT1 54 aa10.19□□□□□ -0.78
SNRNP48-201ENST00000342415 SCNM1Q9BWG6 230 aa10.19□□□□□ -0.78
SNRNP48-201ENST00000342415 APOHP02749 345 aaPredicted RBP10.19□□□□□ -0.78
SNRNP48-201ENST00000342415 PNKDQ8N490 385 aa10.19□□□□□ -0.78
SNRNP48-201ENST00000342415 GRAMD2BQ96HH9 432 aa10.19□□□□□ -0.78
SNRNP48-201ENST00000342415 IGHV3-66A0A0C4DH42 116 aa10.19□□□□□ -0.78
SNRNP48-201ENST00000342415 TMEM189A5PLL7 270 aa10.19□□□□□ -0.78
SNRNP48-201ENST00000342415 HLA-DRB1P01911 266 aa10.19□□□□□ -0.78
SNRNP48-201ENST00000342415 TMEM136Q6ZRR5 245 aa10.19□□□□□ -0.78
SNRNP48-201ENST00000342415 NIT1Q86X76 327 aa10.19□□□□□ -0.78
SNRNP48-201ENST00000342415 GPR82Q96P67 336 aa10.19□□□□□ -0.78
SNRNP48-201ENST00000342415 MRPL32Q9BYC8 188 aaKnown RBP10.19□□□□□ -0.78
SNRNP48-201ENST00000342415 FOXA2Q9Y261 457 aaPredicted RBP10.19□□□□□ -0.78
SNRNP48-201ENST00000342415 CELSR3Q9NYQ7 3312 aa10.19□□□□□ -0.78
SNRNP48-201ENST00000342415 PIEZO1Q92508 2521 aa10.19□□□□□ -0.78
SNRNP48-201ENST00000342415 VPS13AQ96RL7 3174 aa10.19□□□□□ -0.78
SNRNP48-201ENST00000342415 hDV102S1A0JD36 115 aa10.18□□□□□ -0.78
SNRNP48-201ENST00000342415 ERVK11-1P61568 191 aa10.18□□□□□ -0.78
SNRNP48-201ENST00000342415 C19orf24Q9BVV8 132 aa10.18□□□□□ -0.78
SNRNP48-201ENST00000342415 KLK15Q9H2R5 256 aa10.18□□□□□ -0.78
SNRNP48-201ENST00000342415 Q9H3A6 140 aa10.18□□□□□ -0.78
SNRNP48-201ENST00000342415 C2CD3Q4AC94 2353 aa10.18□□□□□ -0.78
SNRNP48-201ENST00000342415 LAMA1P25391 3075 aa10.18□□□□□ -0.78
SNRNP48-201ENST00000342415 IGHV1-46P01743 117 aa10.18□□□□□ -0.78
SNRNP48-201ENST00000342415 BSPH1Q075Z2 132 aa10.18□□□□□ -0.78
SNRNP48-201ENST00000342415 EXOC3-AS1Q8N2X6 119 aa10.18□□□□□ -0.78
SNRNP48-201ENST00000342415 PRR7Q8TB68 274 aa10.18□□□□□ -0.78
SNRNP48-201ENST00000342415 A0A1W2PRE2 83 aa10.18□□□□□ -0.78
SNRNP48-201ENST00000342415 MMP23AO75900 390 aa10.18□□□□□ -0.78
SNRNP48-201ENST00000342415 WISP2O76076 250 aa10.18□□□□□ -0.78
SNRNP48-201ENST00000342415 GCSHP23434 173 aa10.18□□□□□ -0.78
SNRNP48-201ENST00000342415 COL8A2P25067 703 aa10.18□□□□□ -0.78
SNRNP48-201ENST00000342415 MDS2Q8NDY4 140 aa10.18□□□□□ -0.78
SNRNP48-201ENST00000342415 MYO9AB2RTY4 2548 aa10.18□□□□□ -0.78
SNRNP48-201ENST00000342415 AREGP15514 252 aa10.18□□□□□ -0.78
SNRNP48-201ENST00000342415 LINC01560Q8TB33 94 aa10.18□□□□□ -0.78
SNRNP48-201ENST00000342415 THYN1Q9P016 225 aa10.18□□□□□ -0.78
SNRNP48-201ENST00000342415 C1orf174Q8IYL3 243 aa10.17□□□□□ -0.78
SNRNP48-201ENST00000342415 RPP21Q9H633 154 aaKnown RBP10.17□□□□□ -0.78
SNRNP48-201ENST00000342415 EPDR1Q9UM22 224 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms