RNA–Protein interactions for RNA: ENST00000340074.9

UBE3B-201, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-201ENST00000340074 ACY3Q96HD9 319 aa11.51□□□□□ -0.57
UBE3B-201ENST00000340074 MARVELD1Q9BSK0 173 aa11.51□□□□□ -0.57
UBE3B-201ENST00000340074 PUS1Q9Y606 427 aaKnown RBP eCLIP11.51□□□□□ -0.57
UBE3B-201ENST00000340074 SCGB2A1O75556 95 aa11.5□□□□□ -0.57
UBE3B-201ENST00000340074 IGKV1-17P01599 117 aa11.5□□□□□ -0.57
UBE3B-201ENST00000340074 IGLC1P0CG04 106 aa11.5□□□□□ -0.57
UBE3B-201ENST00000340074 OR10J1P30954 320 aa11.5□□□□□ -0.57
UBE3B-201ENST00000340074 DCTN2Q13561 401 aaKnown RBP11.5□□□□□ -0.57
UBE3B-201ENST00000340074 TMEM61Q8N0U2 210 aa11.5□□□□□ -0.57
UBE3B-201ENST00000340074 OR1S2Q8NGQ3 325 aa11.5□□□□□ -0.57
UBE3B-201ENST00000340074 WDR89Q96FK6 387 aaPredicted RBP11.5□□□□□ -0.57
UBE3B-201ENST00000340074 ZFAND3Q9H8U3 227 aa11.5□□□□□ -0.57
UBE3B-201ENST00000340074 PSENENQ9NZ42 101 aa11.5□□□□□ -0.57
UBE3B-201ENST00000340074 STRAPQ9Y3F4 350 aaKnown RBP11.5□□□□□ -0.57
UBE3B-201ENST00000340074 ZNF785A8K8V0 405 aa11.49□□□□□ -0.57
UBE3B-201ENST00000340074 PRAF2O60831 178 aa11.49□□□□□ -0.57
UBE3B-201ENST00000340074 MBPP02686 304 aaPredicted RBP11.49□□□□□ -0.57
UBE3B-201ENST00000340074 GPX4P36969 197 aaPredicted RBP11.49□□□□□ -0.57
UBE3B-201ENST00000340074 PAX9P55771 341 aa11.49□□□□□ -0.57
UBE3B-201ENST00000340074 GAMTQ14353 236 aa11.49□□□□□ -0.57
UBE3B-201ENST00000340074 GUCA2BQ16661 112 aa11.49□□□□□ -0.57
UBE3B-201ENST00000340074 Q8N1Y9 231 aa11.49□□□□□ -0.57
UBE3B-201ENST00000340074 GINS3Q9BRX5 216 aa11.49□□□□□ -0.57
UBE3B-201ENST00000340074 RCL1Q9Y2P8 373 aaKnown RBP11.49□□□□□ -0.57
UBE3B-201ENST00000340074 SMAD5-AS1Q9Y6J3 95 aa11.49□□□□□ -0.57
UBE3B-201ENST00000340074 IGHV3-49A0A0A0MS15 119 aa11.48□□□□□ -0.57
UBE3B-201ENST00000340074 TRAV14DV4A0A0A6YYC5 116 aa11.48□□□□□ -0.57
UBE3B-201ENST00000340074 IGHV7-4-1A0A0J9YVY3 117 aa11.48□□□□□ -0.57
UBE3B-201ENST00000340074 SNRPGP15A8MWD9 76 aa11.48□□□□□ -0.57
UBE3B-201ENST00000340074 SCAF4O95104 1147 aaKnown RBP11.48□□□□□ -0.57
UBE3B-201ENST00000340074 GSG1LQ6UXU4 331 aa11.48□□□□□ -0.57
UBE3B-201ENST00000340074 SLC35E1Q96K37 410 aa11.48□□□□□ -0.57
UBE3B-201ENST00000340074 SMIM8Q96KF7 97 aa11.48□□□□□ -0.57
UBE3B-201ENST00000340074 C2orf50Q96LR7 162 aa11.48□□□□□ -0.57
UBE3B-201ENST00000340074 RAB40CQ96S21 281 aa11.48□□□□□ -0.57
UBE3B-201ENST00000340074 SMPXQ9UHP9 88 aa11.48□□□□□ -0.57
UBE3B-201ENST00000340074 IGHV3OR16-13A0A075B7E8 117 aa11.47□□□□□ -0.57
UBE3B-201ENST00000340074 IGHV3-74A0A0B4J1X5 117 aa11.47□□□□□ -0.57
UBE3B-201ENST00000340074 PRSS46E5RG02 174 aa11.47□□□□□ -0.57
UBE3B-201ENST00000340074 GTSCR1Q86UQ5 136 aa11.47□□□□□ -0.57
UBE3B-201ENST00000340074 RHPN1-AS1Q9BWJ2 59 aa11.47□□□□□ -0.57
UBE3B-201ENST00000340074 K7EPK0 472 aa11.46□□□□□ -0.57
UBE3B-201ENST00000340074 CHEK1O14757 476 aa11.46□□□□□ -0.57
UBE3B-201ENST00000340074 APOHP02749 345 aaPredicted RBP11.46□□□□□ -0.57
UBE3B-201ENST00000340074 YPEL3P61236 119 aaPredicted RBP11.46□□□□□ -0.57
UBE3B-201ENST00000340074 RBPMS2Q6ZRY4 209 aaKnown RBP11.46□□□□□ -0.57
UBE3B-201ENST00000340074 Q8WTZ3 238 aa11.46□□□□□ -0.57
UBE3B-201ENST00000340074 LSM5Q9Y4Y9 91 aaKnown RBP11.46□□□□□ -0.57
UBE3B-201ENST00000340074 TRAV25A0A0B4J276 109 aa11.45□□□□□ -0.58
UBE3B-201ENST00000340074 C7orf66A4D0T2 115 aa11.45□□□□□ -0.58
UBE3B-201ENST00000340074 ZFP92A6NM28 416 aa11.45□□□□□ -0.58
UBE3B-201ENST00000340074 PMS2P5A8MQ11 134 aa11.45□□□□□ -0.58
UBE3B-201ENST00000340074 GOSR2O14653 212 aa11.45□□□□□ -0.58
UBE3B-201ENST00000340074 TOMM40O96008 361 aa11.45□□□□□ -0.58
UBE3B-201ENST00000340074 TAS2R30P59541 319 aa11.45□□□□□ -0.58
UBE3B-201ENST00000340074 CD81P60033 236 aa11.45□□□□□ -0.58
UBE3B-201ENST00000340074 OR8G2PQ6IF36 304 aa11.45□□□□□ -0.58
UBE3B-201ENST00000340074 RNF2Q99496 336 aa11.45□□□□□ -0.58
UBE3B-201ENST00000340074 B9D2Q9BPU9 175 aa11.45□□□□□ -0.58
UBE3B-201ENST00000340074 IGKV1D-37A0A075B6S9 117 aa11.44□□□□□ -0.58
UBE3B-201ENST00000340074 IGHV3-66A0A0C4DH42 116 aa11.44□□□□□ -0.58
UBE3B-201ENST00000340074 TSC22D2O75157 780 aa11.44□□□□□ -0.58
UBE3B-201ENST00000340074 CCNKO75909 580 aa11.44□□□□□ -0.58
UBE3B-201ENST00000340074 SIX6O95475 246 aa11.44□□□□□ -0.58
UBE3B-201ENST00000340074 PTTG1O95997 202 aa11.44□□□□□ -0.58
UBE3B-201ENST00000340074 CD7P09564 240 aa11.44□□□□□ -0.58
UBE3B-201ENST00000340074 METTL15P1P0C7V9 234 aa11.44□□□□□ -0.58
UBE3B-201ENST00000340074 RD3LP0DJH9 198 aa11.44□□□□□ -0.58
UBE3B-201ENST00000340074 PSG1P11464 419 aa11.44□□□□□ -0.58
UBE3B-201ENST00000340074 NPPCP23582 126 aa11.44□□□□□ -0.58
UBE3B-201ENST00000340074 ZNF90Q03938 601 aa11.44□□□□□ -0.58
UBE3B-201ENST00000340074 IL15RAQ13261 267 aa11.44□□□□□ -0.58
UBE3B-201ENST00000340074 LAMTOR1Q6IAA8 161 aa11.44□□□□□ -0.58
UBE3B-201ENST00000340074 TMEM14EPQ6UXP3 125 aa11.44□□□□□ -0.58
UBE3B-201ENST00000340074 ST8SIA2Q92186 375 aa11.44□□□□□ -0.58
UBE3B-201ENST00000340074 METTL26Q96S19 204 aa11.44□□□□□ -0.58
UBE3B-201ENST00000340074 NEURL2Q9BR09 285 aa11.44□□□□□ -0.58
UBE3B-201ENST00000340074 DNAH9Q9NYC9 4486 aa11.44□□□□□ -0.58
UBE3B-201ENST00000340074 IGKV1OR2-108A0A075B7D4 117 aa11.43□□□□□ -0.58
UBE3B-201ENST00000340074 L7N2F9 121 aa11.43□□□□□ -0.58
UBE3B-201ENST00000340074 TSPAN4O14817 238 aa11.43□□□□□ -0.58
UBE3B-201ENST00000340074 IL4P05112 153 aa11.43□□□□□ -0.58
UBE3B-201ENST00000340074 IGHV4-30-4P0DP06 118 aa11.43□□□□□ -0.58
UBE3B-201ENST00000340074 S100A10P60903 97 aa11.43□□□□□ -0.58
UBE3B-201ENST00000340074 VAMP2P63027 116 aa11.43□□□□□ -0.58
UBE3B-201ENST00000340074 ACOT7LQ6ZUV0 252 aa11.43□□□□□ -0.58
UBE3B-201ENST00000340074 VSIRQ9H7M9 311 aa11.43□□□□□ -0.58
UBE3B-201ENST00000340074 SSNA1O43805 119 aa11.43□□□□□ -0.58
UBE3B-201ENST00000340074 FRMD6-AS1P0C7T7 363 aa11.43□□□□□ -0.58
UBE3B-201ENST00000340074 CRYBB3P26998 211 aa11.43□□□□□ -0.58
UBE3B-201ENST00000340074 BMI1P35226 326 aa11.43□□□□□ -0.58
UBE3B-201ENST00000340074 RAB32Q13637 225 aa11.43□□□□□ -0.58
UBE3B-201ENST00000340074 USF2Q15853 346 aaPredicted RBP11.43□□□□□ -0.58
UBE3B-201ENST00000340074 LILRB2Q8N423 598 aa11.43□□□□□ -0.58
UBE3B-201ENST00000340074 THAP8Q8NA92 274 aa11.43□□□□□ -0.58
UBE3B-201ENST00000340074 OR51G1Q8NGK1 321 aa11.43□□□□□ -0.58
UBE3B-201ENST00000340074 SPAG8Q99932 426 aaPredicted RBP11.43□□□□□ -0.58
UBE3B-201ENST00000340074 C11orf1Q9H5F2 150 aa11.43□□□□□ -0.58
UBE3B-201ENST00000340074 BCAP31P51572 246 aa11.42□□□□□ -0.58
UBE3B-201ENST00000340074 RRAS2P62070 204 aaPredicted RBP11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms