RNA–Protein interactions for RNA: ENST00000339861.8

SEMA4D-201, Transcript of semaphorin 4D, humanhuman

TSL 5 BASIC

Gene SEMA4D, Length 4,258 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-201ENST00000339861 TBR1Q16650 682 aa9.05□□□□□ -0.96
SEMA4D-201ENST00000339861 MBNL2Q5VZF2 373 aaKnown RBP9.05□□□□□ -0.96
SEMA4D-201ENST00000339861 ZNF596Q8TC21 504 aa9.05□□□□□ -0.96
SEMA4D-201ENST00000339861 TIMD4Q96H15 378 aa9.05□□□□□ -0.96
SEMA4D-201ENST00000339861 CGB1A6NKQ9 187 aa9.05□□□□□ -0.96
SEMA4D-201ENST00000339861 C17orf100A8MU93 164 aa9.05□□□□□ -0.96
SEMA4D-201ENST00000339861 M0QZK8 103 aa9.05□□□□□ -0.96
SEMA4D-201ENST00000339861 BMPR1BO00238 502 aa9.05□□□□□ -0.96
SEMA4D-201ENST00000339861 ARL3P36405 182 aa9.05□□□□□ -0.96
SEMA4D-201ENST00000339861 LYPD2Q6UXB3 125 aa9.05□□□□□ -0.96
SEMA4D-201ENST00000339861 OR52E5Q8NH55 327 aa9.05□□□□□ -0.96
SEMA4D-201ENST00000339861 OSR1Q8TAX0 266 aaPredicted RBP9.05□□□□□ -0.96
SEMA4D-201ENST00000339861 Q8TCH9 128 aa9.05□□□□□ -0.96
SEMA4D-201ENST00000339861 ABHD17AQ96GS6 310 aa9.05□□□□□ -0.96
SEMA4D-201ENST00000339861 AAMDCQ9H7C9 122 aa9.05□□□□□ -0.96
SEMA4D-201ENST00000339861 MSMPQ1L6U9 139 aa9.05□□□□□ -0.96
SEMA4D-201ENST00000339861 PNKDQ8N490 385 aa9.05□□□□□ -0.96
SEMA4D-201ENST00000339861 NEUROG1Q92886 237 aa9.05□□□□□ -0.96
SEMA4D-201ENST00000339861 SFXN3Q9BWM7 321 aa9.05□□□□□ -0.96
SEMA4D-201ENST00000339861 ZNF785A8K8V0 405 aa9.05□□□□□ -0.96
SEMA4D-201ENST00000339861 K7EN84 100 aa9.05□□□□□ -0.96
SEMA4D-201ENST00000339861 PROP1O75360 226 aa9.05□□□□□ -0.96
SEMA4D-201ENST00000339861 TNFSF13O75888 250 aa9.05□□□□□ -0.96
SEMA4D-201ENST00000339861 LY6HO94772 140 aa9.05□□□□□ -0.96
SEMA4D-201ENST00000339861 Q6ZWC4 215 aa9.05□□□□□ -0.96
SEMA4D-201ENST00000339861 VPS25Q9BRG1 176 aa9.05□□□□□ -0.96
SEMA4D-201ENST00000339861 UQCR10Q9UDW1 63 aa9.05□□□□□ -0.96
SEMA4D-201ENST00000339861 PMS2P5A8MQ11 134 aa9.04□□□□□ -0.96
SEMA4D-201ENST00000339861 LEPROTL1O95214 131 aa9.04□□□□□ -0.96
SEMA4D-201ENST00000339861 FCER1GP30273 86 aa9.04□□□□□ -0.96
SEMA4D-201ENST00000339861 SELENOTP62341 195 aa9.04□□□□□ -0.96
SEMA4D-201ENST00000339861 LBHQ53QV2 105 aaPredicted RBP9.04□□□□□ -0.96
SEMA4D-201ENST00000339861 GAFA1Q96PS6 74 aa9.04□□□□□ -0.96
SEMA4D-201ENST00000339861 CDC42EP3Q9UKI2 254 aa9.04□□□□□ -0.96
SEMA4D-201ENST00000339861 FOXA2Q9Y261 457 aaPredicted RBP9.04□□□□□ -0.96
SEMA4D-201ENST00000339861 FREM2Q5SZK8 3169 aa9.04□□□□□ -0.96
SEMA4D-201ENST00000339861 ZNF138P52744 262 aa9.04□□□□□ -0.96
SEMA4D-201ENST00000339861 ZNF124Q15973 351 aa9.04□□□□□ -0.96
SEMA4D-201ENST00000339861 C17orf58Q2M2W7 97 aa9.04□□□□□ -0.96
SEMA4D-201ENST00000339861 AARDQ4LEZ3 155 aa9.04□□□□□ -0.96
SEMA4D-201ENST00000339861 C1orf194Q5T5A4 169 aa9.04□□□□□ -0.96
SEMA4D-201ENST00000339861 C1orf174Q8IYL3 243 aa9.04□□□□□ -0.96
SEMA4D-201ENST00000339861 IGFBPL1Q8WX77 278 aa9.04□□□□□ -0.96
SEMA4D-201ENST00000339861 RAB1CQ92928 201 aa9.04□□□□□ -0.96
SEMA4D-201ENST00000339861 MIEN1Q9BRT3 115 aa9.04□□□□□ -0.96
SEMA4D-201ENST00000339861 PARD6GQ9BYG4 376 aaPredicted RBP9.04□□□□□ -0.96
SEMA4D-201ENST00000339861 GGTLC3B5MD39 225 aa9.04□□□□□ -0.96
SEMA4D-201ENST00000339861 NUTF2P61970 127 aaKnown RBP9.04□□□□□ -0.96
SEMA4D-201ENST00000339861 COX19Q49B96 90 aa9.04□□□□□ -0.96
SEMA4D-201ENST00000339861 TMEM200BQ69YZ2 307 aa9.04□□□□□ -0.96
SEMA4D-201ENST00000339861 OR8B3Q8NGG8 313 aa9.04□□□□□ -0.96
SEMA4D-201ENST00000339861 TMUB1Q9BVT8 246 aa9.04□□□□□ -0.96
SEMA4D-201ENST00000339861 LINC00312Q9Y6C7 94 aa9.04□□□□□ -0.96
SEMA4D-201ENST00000339861 COL6A3P12111 3177 aa9.03□□□□□ -0.96
SEMA4D-201ENST00000339861 KIAA1549Q9HCM3 1950 aa9.03□□□□□ -0.96
SEMA4D-201ENST00000339861 SCGB2A1O75556 95 aa9.03□□□□□ -0.96
SEMA4D-201ENST00000339861 UQCRFS1P47985 274 aa9.03□□□□□ -0.96
SEMA4D-201ENST00000339861 SSBP2P81877 361 aaPredicted RBP9.03□□□□□ -0.96
SEMA4D-201ENST00000339861 WFDC3Q8IUB2 231 aa9.03□□□□□ -0.96
SEMA4D-201ENST00000339861 NUDT10Q8NFP7 164 aa9.03□□□□□ -0.96
SEMA4D-201ENST00000339861 NUDT11Q96G61 164 aa9.03□□□□□ -0.96
SEMA4D-201ENST00000339861 KCNS1Q96KK3 526 aa9.03□□□□□ -0.96
SEMA4D-201ENST00000339861 SH2D7A6NKC9 451 aaPredicted RBP9.03□□□□□ -0.96
SEMA4D-201ENST00000339861 CORTO00230 105 aa9.03□□□□□ -0.96
SEMA4D-201ENST00000339861 ZNF324O75467 553 aaPredicted RBP9.03□□□□□ -0.96
SEMA4D-201ENST00000339861 IGHG3P01860 377 aa9.03□□□□□ -0.96
SEMA4D-201ENST00000339861 ORM1P02763 201 aa9.03□□□□□ -0.96
SEMA4D-201ENST00000339861 LOXL3P58215 753 aa9.03□□□□□ -0.96
SEMA4D-201ENST00000339861 KLF17Q5JT82 389 aaPredicted RBP9.03□□□□□ -0.96
SEMA4D-201ENST00000339861 STXBP6Q8NFX7 210 aa9.03□□□□□ -0.96
SEMA4D-201ENST00000339861 IGHV3-49A0A0A0MS15 119 aa9.03□□□□□ -0.96
SEMA4D-201ENST00000339861 IGHV1-69-2A0A0G2JMI3 117 aa9.03□□□□□ -0.96
SEMA4D-201ENST00000339861 IL4P05112 153 aa9.03□□□□□ -0.96
SEMA4D-201ENST00000339861 C5orf17Q8NAS9 161 aa9.03□□□□□ -0.96
SEMA4D-201ENST00000339861 YPEL4Q96NS1 127 aa9.03□□□□□ -0.96
SEMA4D-201ENST00000339861 FBXL7Q9UJT9 491 aa9.03□□□□□ -0.96
SEMA4D-201ENST00000339861 ATG2AQ2TAZ0 1938 aa9.03□□□□□ -0.96
SEMA4D-201ENST00000339861 PPIAL4CA0A0B4J2A2 164 aa9.02□□□□□ -0.96
SEMA4D-201ENST00000339861 PPIAL4GP0DN37 164 aa9.02□□□□□ -0.96
SEMA4D-201ENST00000339861 AREGP15514 252 aa9.02□□□□□ -0.96
SEMA4D-201ENST00000339861 MC5RP33032 325 aa9.02□□□□□ -0.96
SEMA4D-201ENST00000339861 EXOC3-AS1Q8N2X6 119 aa9.02□□□□□ -0.96
SEMA4D-201ENST00000339861 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.02□□□□□ -0.96
SEMA4D-201ENST00000339861 TMEM186Q96B77 213 aa9.02□□□□□ -0.96
SEMA4D-201ENST00000339861 RBM14Q96PK6 669 aaKnown RBP9.02□□□□□ -0.96
SEMA4D-201ENST00000339861 TPSG1Q9NRR2 321 aa9.02□□□□□ -0.96
SEMA4D-201ENST00000339861 NCOR2Q9Y618 2525 aa9.02□□□□□ -0.96
SEMA4D-201ENST00000339861 DSPP15924 2871 aaKnown RBP9.02□□□□□ -0.96
SEMA4D-201ENST00000339861 KMT2EQ8IZD2 1858 aa9.02□□□□□ -0.97
SEMA4D-201ENST00000339861 RNASE2P10153 161 aaKnown RBP9.02□□□□□ -0.97
SEMA4D-201ENST00000339861 TMEM191AQ9H0A3 160 aa9.02□□□□□ -0.97
SEMA4D-201ENST00000339861 CACNA1AO00555 2505 aa9.02□□□□□ -0.97
SEMA4D-201ENST00000339861 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.02□□□□□ -0.97
SEMA4D-201ENST00000339861 IZUMO1RA6ND01 250 aa9.02□□□□□ -0.97
SEMA4D-201ENST00000339861 F2RL2O00254 374 aa9.02□□□□□ -0.97
SEMA4D-201ENST00000339861 OR2J3O76001 311 aa9.02□□□□□ -0.97
SEMA4D-201ENST00000339861 WNT2P09544 360 aa9.02□□□□□ -0.97
SEMA4D-201ENST00000339861 ECSCRQ19T08 205 aa9.02□□□□□ -0.97
SEMA4D-201ENST00000339861 FAM168AQ92567 244 aa9.02□□□□□ -0.97
SEMA4D-201ENST00000339861 RCHY1Q96PM5 261 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms