RNA–Protein interactions for RNA: ENST00000339438.10

CSDE1-202, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,006 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-202ENST00000339438 KLRC4-KLRK1H3BQV0 150 aa4.55□□□□□ -1.68
CSDE1-202ENST00000339438 CXorf1O96002 111 aa4.55□□□□□ -1.68
CSDE1-202ENST00000339438 P04436 131 aa4.55□□□□□ -1.68
CSDE1-202ENST00000339438 OPRK1P41145 380 aa4.55□□□□□ -1.68
CSDE1-202ENST00000339438 GPM6AP51674 278 aa4.55□□□□□ -1.68
CSDE1-202ENST00000339438 TCL1AP56279 114 aa4.55□□□□□ -1.68
CSDE1-202ENST00000339438 RPS16P62249 146 aaKnown RBP4.55□□□□□ -1.68
CSDE1-202ENST00000339438 PLGLB1Q02325 96 aa4.55□□□□□ -1.68
CSDE1-202ENST00000339438 KIR3DS1Q14943 382 aa4.55□□□□□ -1.68
CSDE1-202ENST00000339438 C3AR1Q16581 482 aa4.55□□□□□ -1.68
CSDE1-202ENST00000339438 TEX45Q8NA69 505 aa4.55□□□□□ -1.68
CSDE1-202ENST00000339438 OR11H1Q8NG94 326 aa4.55□□□□□ -1.68
CSDE1-202ENST00000339438 OR11H2Q8NH07 326 aa4.55□□□□□ -1.68
CSDE1-202ENST00000339438 MRAP2Q96G30 205 aa4.55□□□□□ -1.68
CSDE1-202ENST00000339438 SPAG8Q99932 426 aaPredicted RBP4.55□□□□□ -1.68
CSDE1-202ENST00000339438 LINC00470Q9BZP3 86 aa4.55□□□□□ -1.68
CSDE1-202ENST00000339438 RABAC1Q9UI14 185 aa4.55□□□□□ -1.68
CSDE1-202ENST00000339438 PRO0461Q9UI25 63 aa4.55□□□□□ -1.68
CSDE1-202ENST00000339438 BOKQ9UMX3 212 aaPredicted RBP4.55□□□□□ -1.68
CSDE1-202ENST00000339438 PSG8Q9UQ74 426 aa4.55□□□□□ -1.68
CSDE1-202ENST00000339438 INSIG2Q9Y5U4 225 aa4.55□□□□□ -1.68
CSDE1-202ENST00000339438 PRR14LQ5THK1 2151 aa4.55□□□□□ -1.68
CSDE1-202ENST00000339438 HSBP1O75506 76 aa4.55□□□□□ -1.68
CSDE1-202ENST00000339438 CLDN1O95832 211 aa4.55□□□□□ -1.68
CSDE1-202ENST00000339438 NCR2O95944 276 aa4.55□□□□□ -1.68
CSDE1-202ENST00000339438 IGHV3-9P01782 118 aa4.55□□□□□ -1.68
CSDE1-202ENST00000339438 RFPL3SP0C7P2 107 aa4.55□□□□□ -1.68
CSDE1-202ENST00000339438 BCL3P20749 454 aa4.55□□□□□ -1.68
CSDE1-202ENST00000339438 S100GP29377 79 aa4.55□□□□□ -1.68
CSDE1-202ENST00000339438 GCHFRP30047 84 aa4.55□□□□□ -1.68
CSDE1-202ENST00000339438 PLP1P60201 277 aa4.55□□□□□ -1.68
CSDE1-202ENST00000339438 WIPI1Q5MNZ9 446 aaPredicted RBP4.55□□□□□ -1.68
CSDE1-202ENST00000339438 BOD1L2Q8IYS8 172 aa4.55□□□□□ -1.68
CSDE1-202ENST00000339438 GJC3Q8NFK1 279 aa4.55□□□□□ -1.68
CSDE1-202ENST00000339438 C19orf24Q9BVV8 132 aa4.55□□□□□ -1.68
CSDE1-202ENST00000339438 GGTLC1Q9BX51 225 aa4.55□□□□□ -1.68
CSDE1-202ENST00000339438 CDIP1Q9H305 208 aa4.55□□□□□ -1.68
CSDE1-202ENST00000339438 GEMIN7Q9H840 131 aaKnown RBP4.55□□□□□ -1.68
CSDE1-202ENST00000339438 LINC00312Q9Y6C7 94 aa4.55□□□□□ -1.68
CSDE1-202ENST00000339438 C16orf97H3BN30 126 aa4.55□□□□□ -1.68
CSDE1-202ENST00000339438 ZIC3O60481 467 aa4.55□□□□□ -1.68
CSDE1-202ENST00000339438 IGHG3P01860 377 aa4.55□□□□□ -1.68
CSDE1-202ENST00000339438 HTR1DP28221 377 aa4.55□□□□□ -1.68
CSDE1-202ENST00000339438 NTF4P34130 210 aa4.55□□□□□ -1.68
CSDE1-202ENST00000339438 CYB561P49447 251 aa4.55□□□□□ -1.68
CSDE1-202ENST00000339438 ZNF645Q8N7E2 425 aa4.55□□□□□ -1.68
CSDE1-202ENST00000339438 ZNF611Q8N823 705 aa4.55□□□□□ -1.68
CSDE1-202ENST00000339438 NUP35Q8NFH5 326 aa4.55□□□□□ -1.68
CSDE1-202ENST00000339438 RALYQ9UKM9 306 aaKnown RBP4.55□□□□□ -1.68
CSDE1-202ENST00000339438 CHCHD2Q9Y6H1 151 aaPredicted RBP4.55□□□□□ -1.68
CSDE1-202ENST00000339438 SPTBN1Q01082 2364 aaKnown RBP4.54□□□□□ -1.68
CSDE1-202ENST00000339438 LRP5LA4QPB2 252 aa4.54□□□□□ -1.68
CSDE1-202ENST00000339438 PINLYPA6NC86 204 aa4.54□□□□□ -1.68
CSDE1-202ENST00000339438 C3orf80F5H4A9 247 aa4.54□□□□□ -1.68
CSDE1-202ENST00000339438 USF1P22415 310 aaPredicted RBP4.54□□□□□ -1.68
CSDE1-202ENST00000339438 INSL3P51460 131 aa4.54□□□□□ -1.68
CSDE1-202ENST00000339438 ESPL1Q14674 2120 aa4.54□□□□□ -1.68
CSDE1-202ENST00000339438 PQLC2Q6ZP29 291 aa4.54□□□□□ -1.68
CSDE1-202ENST00000339438 GCSAMQ8N6F7 178 aa4.54□□□□□ -1.68
CSDE1-202ENST00000339438 FADS6Q8N9I5 356 aa4.54□□□□□ -1.68
CSDE1-202ENST00000339438 DDB2Q92466 427 aa4.54□□□□□ -1.68
CSDE1-202ENST00000339438 DEFB127Q9H1M4 99 aa4.54□□□□□ -1.68
CSDE1-202ENST00000339438 SAP30LQ9HAJ7 183 aa4.54□□□□□ -1.68
CSDE1-202ENST00000339438 IDI2-AS1Q9NZ38 188 aa4.54□□□□□ -1.68
CSDE1-202ENST00000339438 ARL2-SNX15V9GYD0 113 aa4.54□□□□□ -1.68
CSDE1-202ENST00000339438 CENPEQ02224 2701 aa4.54□□□□□ -1.68
CSDE1-202ENST00000339438 TRAV24A0A0B4J272 114 aa4.54□□□□□ -1.68
CSDE1-202ENST00000339438 HBZP02008 142 aa4.54□□□□□ -1.68
CSDE1-202ENST00000339438 CELA3AP09093 270 aa4.54□□□□□ -1.68
CSDE1-202ENST00000339438 EDDM3BP56851 147 aa4.54□□□□□ -1.68
CSDE1-202ENST00000339438 FGF12P61328 243 aa4.54□□□□□ -1.68
CSDE1-202ENST00000339438 RPL30P62888 115 aaKnown RBP4.54□□□□□ -1.68
CSDE1-202ENST00000339438 EFNB3Q15768 340 aa4.54□□□□□ -1.68
CSDE1-202ENST00000339438 NHLRC2Q8NBF2 726 aa4.54□□□□□ -1.68
CSDE1-202ENST00000339438 DPF1Q92782 380 aa4.54□□□□□ -1.68
CSDE1-202ENST00000339438 BORCS8Q96FH0 119 aa4.54□□□□□ -1.68
CSDE1-202ENST00000339438 FAM110AQ9BQ89 295 aa4.54□□□□□ -1.68
CSDE1-202ENST00000339438 HEYLQ9NQ87 328 aaPredicted RBP4.54□□□□□ -1.68
CSDE1-202ENST00000339438 EPG5Q9HCE0 2579 aa4.54□□□□□ -1.68
CSDE1-202ENST00000339438 FREM1Q5H8C1 2179 aa4.54□□□□□ -1.68
CSDE1-202ENST00000339438 KIR2DS1A0A191URI9 304 aa4.54□□□□□ -1.68
CSDE1-202ENST00000339438 GGTLC3B5MD39 225 aa4.54□□□□□ -1.68
CSDE1-202ENST00000339438 FNDC10F2Z333 226 aa4.54□□□□□ -1.68
CSDE1-202ENST00000339438 SNAI2O43623 268 aa4.54□□□□□ -1.68
CSDE1-202ENST00000339438 OR9G9P0C7N8 305 aa4.54□□□□□ -1.68
CSDE1-202ENST00000339438 CD24P25063 80 aa4.54□□□□□ -1.68
CSDE1-202ENST00000339438 FCGR2BP31994 310 aaPredicted RBP4.54□□□□□ -1.68
CSDE1-202ENST00000339438 KIR2DS4P43632 304 aa4.54□□□□□ -1.68
CSDE1-202ENST00000339438 KIR2DS1Q14954 304 aa4.54□□□□□ -1.68
CSDE1-202ENST00000339438 RNASEKQ6P5S7 137 aaKnown RBP4.54□□□□□ -1.68
CSDE1-202ENST00000339438 SPCS1Q9Y6A9 102 aa4.54□□□□□ -1.68
CSDE1-202ENST00000339438 A0A096LNJ9 63 aa4.53□□□□□ -1.68
CSDE1-202ENST00000339438 HIST1H1EP10412 219 aaKnown RBP4.53□□□□□ -1.68
CSDE1-202ENST00000339438 UQCRFS1P47985 274 aa4.53□□□□□ -1.68
CSDE1-202ENST00000339438 ATP5G2Q06055 141 aa4.53□□□□□ -1.68
CSDE1-202ENST00000339438 PRR31Q5SQ13 230 aa4.53□□□□□ -1.68
CSDE1-202ENST00000339438 ABHD12Q8N2K0 398 aa4.53□□□□□ -1.68
CSDE1-202ENST00000339438 DRAM1Q8N682 238 aa4.53□□□□□ -1.68
CSDE1-202ENST00000339438 GTSF1Q8WW33 167 aa4.53□□□□□ -1.68
CSDE1-202ENST00000339438 CHCHD1Q96BP2 118 aaKnown RBP4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms