RNA–Protein interactions for RNA: ENST00000339276.5

SFN-201, Transcript of stratifin, humanhuman

APPRIS P1 BASIC

Gene SFN, Length 1,320 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFN-201ENST00000339276 IGKV1-17P01599 117 aa12.72□□□□□ -0.37
SFN-201ENST00000339276 OR10J1P30954 320 aa12.72□□□□□ -0.37
SFN-201ENST00000339276 BCAP31P51572 246 aa12.72□□□□□ -0.37
SFN-201ENST00000339276 CAV2P51636 162 aa12.72□□□□□ -0.37
SFN-201ENST00000339276 TM4SF20Q53R12 229 aa12.72□□□□□ -0.37
SFN-201ENST00000339276 ADAMTSL5Q6ZMM2 481 aa12.72□□□□□ -0.37
SFN-201ENST00000339276 ACOT7LQ6ZUV0 252 aa12.72□□□□□ -0.37
SFN-201ENST00000339276 PPP1R1CQ8WVI7 109 aa12.72□□□□□ -0.37
SFN-201ENST00000339276 OR5AC2Q9NZP5 309 aa12.72□□□□□ -0.37
SFN-201ENST00000339276 NOTCH1P46531 2555 aa12.71□□□□□ -0.37
SFN-201ENST00000339276 TRAV30A0A087WSZ9 112 aa12.71□□□□□ -0.37
SFN-201ENST00000339276 FAM24AA6NFZ4 105 aa12.71□□□□□ -0.37
SFN-201ENST00000339276 C2orf70A6NJV1 201 aa12.71□□□□□ -0.37
SFN-201ENST00000339276 H0YIZ8 118 aa12.71□□□□□ -0.37
SFN-201ENST00000339276 YIF1AO95070 293 aa12.71□□□□□ -0.37
SFN-201ENST00000339276 INSL3P51460 131 aa12.71□□□□□ -0.37
SFN-201ENST00000339276 RRAS2P62070 204 aaPredicted RBP12.71□□□□□ -0.37
SFN-201ENST00000339276 ARL16Q0P5N6 197 aa12.71□□□□□ -0.37
SFN-201ENST00000339276 KPRPQ5T749 579 aaPredicted RBP12.71□□□□□ -0.37
SFN-201ENST00000339276 OR1S2Q8NGQ3 325 aa12.71□□□□□ -0.37
SFN-201ENST00000339276 C20orf24Q9BUV8 137 aa12.71□□□□□ -0.37
SFN-201ENST00000339276 LYRM2Q9NU23 88 aaPredicted RBP12.71□□□□□ -0.37
SFN-201ENST00000339276 UFC1Q9Y3C8 167 aa12.71□□□□□ -0.37
SFN-201ENST00000339276 ZNF207O43670 478 aaKnown RBP12.7□□□□□ -0.38
SFN-201ENST00000339276 SCGB2A1O75556 95 aa12.7□□□□□ -0.38
SFN-201ENST00000339276 TOMM20LQ6UXN7 152 aa12.7□□□□□ -0.38
SFN-201ENST00000339276 ZNF600Q6ZNG1 722 aa12.7□□□□□ -0.38
SFN-201ENST00000339276 PUS1Q9Y606 427 aaKnown RBP eCLIP12.7□□□□□ -0.38
SFN-201ENST00000339276 FBN3Q75N90 2809 aa12.69□□□□□ -0.38
SFN-201ENST00000339276 IGKV1D-37A0A075B6S9 117 aa12.69□□□□□ -0.38
SFN-201ENST00000339276 IGKV1OR2-108A0A075B7D4 117 aa12.69□□□□□ -0.38
SFN-201ENST00000339276 IGSF23A1L1A6 192 aa12.69□□□□□ -0.38
SFN-201ENST00000339276 CST7O76096 145 aa12.69□□□□□ -0.38
SFN-201ENST00000339276 MPC2O95563 127 aa12.69□□□□□ -0.38
SFN-201ENST00000339276 RLN2P04090 185 aa12.69□□□□□ -0.38
SFN-201ENST00000339276 FOLR2P14207 255 aa12.69□□□□□ -0.38
SFN-201ENST00000339276 KRTAP10-11P60412 298 aa12.69□□□□□ -0.38
SFN-201ENST00000339276 EGFEM1PQ0D2K5 195 aa12.69□□□□□ -0.38
SFN-201ENST00000339276 OR10P1Q8NGE3 313 aa12.69□□□□□ -0.38
SFN-201ENST00000339276 ZFAND3Q9H8U3 227 aa12.69□□□□□ -0.38
SFN-201ENST00000339276 DAZ1Q9NQZ3 744 aaKnown RBP12.69□□□□□ -0.38
SFN-201ENST00000339276 SIGLEC8Q9NYZ4 499 aa12.69□□□□□ -0.38
SFN-201ENST00000339276 SMCO3A2RU48 225 aa12.68□□□□□ -0.38
SFN-201ENST00000339276 ZFP92A6NM28 416 aa12.68□□□□□ -0.38
SFN-201ENST00000339276 E5RGE8 158 aa12.68□□□□□ -0.38
SFN-201ENST00000339276 IGLV1-51P01701 117 aa12.68□□□□□ -0.38
SFN-201ENST00000339276 CBLN1P23435 193 aa12.68□□□□□ -0.38
SFN-201ENST00000339276 ELLP55199 621 aaPredicted RBP12.68□□□□□ -0.38
SFN-201ENST00000339276 YPEL3P61236 119 aaPredicted RBP12.68□□□□□ -0.38
SFN-201ENST00000339276 DLK1P80370 383 aa12.68□□□□□ -0.38
SFN-201ENST00000339276 AKR1C1Q04828 323 aa12.68□□□□□ -0.38
SFN-201ENST00000339276 TMEM252Q8N6L7 170 aa12.68□□□□□ -0.38
SFN-201ENST00000339276 RNF126Q9BV68 326 aa12.68□□□□□ -0.38
SFN-201ENST00000339276 SELENOKQ9Y6D0 94 aa12.68□□□□□ -0.38
SFN-201ENST00000339276 ZNF90Q03938 601 aa12.67□□□□□ -0.38
SFN-201ENST00000339276 TMEM217Q8N7C4 229 aa12.67□□□□□ -0.38
SFN-201ENST00000339276 THAP8Q8NA92 274 aa12.67□□□□□ -0.38
SFN-201ENST00000339276 DYNLRB2Q8TF09 96 aa12.67□□□□□ -0.38
SFN-201ENST00000339276 K7EMT4 169 aa12.66□□□□□ -0.38
SFN-201ENST00000339276 TOMM40O96008 361 aa12.66□□□□□ -0.38
SFN-201ENST00000339276 PRB2P02812 416 aaPredicted RBP12.66□□□□□ -0.38
SFN-201ENST00000339276 PET100P0DJ07 73 aa12.66□□□□□ -0.38
SFN-201ENST00000339276 C8orf88P0DMB2 117 aa12.66□□□□□ -0.38
SFN-201ENST00000339276 P2RY1P47900 373 aa12.66□□□□□ -0.38
SFN-201ENST00000339276 SULT1A1P50225 295 aa12.66□□□□□ -0.38
SFN-201ENST00000339276 SLC38A11Q08AI6 406 aa12.66□□□□□ -0.38
SFN-201ENST00000339276 MRPL27Q9P0M9 148 aaKnown RBP12.66□□□□□ -0.38
SFN-201ENST00000339276 MBD2Q9UBB5 411 aa12.66□□□□□ -0.38
SFN-201ENST00000339276 MLXQ9UH92 298 aa12.66□□□□□ -0.38
SFN-201ENST00000339276 IGHV3-49A0A0A0MS15 119 aa12.65□□□□□ -0.38
SFN-201ENST00000339276 TRAV14DV4A0A0A6YYC5 116 aa12.65□□□□□ -0.38
SFN-201ENST00000339276 SCAF4O95104 1147 aaKnown RBP12.65□□□□□ -0.38
SFN-201ENST00000339276 GIPP09681 153 aaPredicted RBP12.65□□□□□ -0.38
SFN-201ENST00000339276 RD3LP0DJH9 198 aa12.65□□□□□ -0.38
SFN-201ENST00000339276 PSG1P11464 419 aa12.65□□□□□ -0.38
SFN-201ENST00000339276 EWSR1Q01844 656 aaKnown RBP eCLIP12.65□□□□□ -0.38
SFN-201ENST00000339276 BTNL8Q6UX41 500 aa12.65□□□□□ -0.38
SFN-201ENST00000339276 TMEM144Q7Z5S9 345 aa12.65□□□□□ -0.38
SFN-201ENST00000339276 STX12Q86Y82 276 aa12.65□□□□□ -0.38
SFN-201ENST00000339276 Q8WTZ3 238 aa12.65□□□□□ -0.38
SFN-201ENST00000339276 MARC2Q969Z3 335 aa12.65□□□□□ -0.38
SFN-201ENST00000339276 TRGV9Q99603 122 aa12.65□□□□□ -0.38
SFN-201ENST00000339276 GINS3Q9BRX5 216 aa12.65□□□□□ -0.38
SFN-201ENST00000339276 IGHV7-4-1A0A0J9YVY3 117 aa12.64□□□□□ -0.39
SFN-201ENST00000339276 IZUMO1RA6ND01 250 aa12.64□□□□□ -0.39
SFN-201ENST00000339276 FNDC10F2Z333 226 aa12.64□□□□□ -0.39
SFN-201ENST00000339276 IL4P05112 153 aa12.64□□□□□ -0.39
SFN-201ENST00000339276 OR2F1Q13607 317 aa12.64□□□□□ -0.39
SFN-201ENST00000339276 DEFB114Q30KQ6 69 aa12.64□□□□□ -0.39
SFN-201ENST00000339276 CD300EQ496F6 205 aaPredicted RBP12.64□□□□□ -0.39
SFN-201ENST00000339276 GGACTQ9BVM4 153 aa12.64□□□□□ -0.39
SFN-201ENST00000339276 DNAH3Q8TD57 4116 aa12.63□□□□□ -0.39
SFN-201ENST00000339276 IGHV3OR16-13A0A075B7E8 117 aa12.63□□□□□ -0.39
SFN-201ENST00000339276 IGHV3-74A0A0B4J1X5 117 aa12.63□□□□□ -0.39
SFN-201ENST00000339276 APOHP02749 345 aaPredicted RBP12.63□□□□□ -0.39
SFN-201ENST00000339276 LYL1P12980 280 aa12.63□□□□□ -0.39
SFN-201ENST00000339276 DEFA6Q01524 100 aa12.63□□□□□ -0.39
SFN-201ENST00000339276 NHLH2Q02577 135 aa12.63□□□□□ -0.39
SFN-201ENST00000339276 USF2Q15853 346 aaPredicted RBP12.63□□□□□ -0.39
SFN-201ENST00000339276 Q5BKY6 102 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms