RNA–Protein interactions for RNA: ENST00000338546.9

HPS1-202, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 1 (best) BASIC

Gene HPS1, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-202ENST00000338546 SGMS2Q8NHU3 365 aa12.84□□□□□ -0.35
HPS1-202ENST00000338546 RBM14Q96PK6 669 aaKnown RBP12.84□□□□□ -0.35
HPS1-202ENST00000338546 NAT8Q9UHE5 227 aa12.84□□□□□ -0.35
HPS1-202ENST00000338546 PRELID1Q9Y255 219 aa12.84□□□□□ -0.35
HPS1-202ENST00000338546 EGR2P11161 476 aaPredicted RBP12.83□□□□□ -0.36
HPS1-202ENST00000338546 NDPQ00604 133 aa12.83□□□□□ -0.36
HPS1-202ENST00000338546 TMEM88Q6PEY1 159 aa12.83□□□□□ -0.36
HPS1-202ENST00000338546 C19orf35Q6ZS72 473 aa12.83□□□□□ -0.36
HPS1-202ENST00000338546 FAM103A1Q9BTL3 118 aaKnown RBP12.83□□□□□ -0.36
HPS1-202ENST00000338546 SDF2L1Q9HCN8 221 aa12.83□□□□□ -0.36
HPS1-202ENST00000338546 MOB4Q9Y3A3 225 aa12.83□□□□□ -0.36
HPS1-202ENST00000338546 TACC2O95359 2948 aa12.83□□□□□ -0.36
HPS1-202ENST00000338546 IGHV3-48P01763 117 aa12.82□□□□□ -0.36
HPS1-202ENST00000338546 TMEM241Q24JQ0 296 aa12.82□□□□□ -0.36
HPS1-202ENST00000338546 CST9LP1Q5W188 147 aa12.82□□□□□ -0.36
HPS1-202ENST00000338546 RUSC1-AS1Q66K80 236 aa12.82□□□□□ -0.36
HPS1-202ENST00000338546 CBLN2Q8IUK8 224 aa12.82□□□□□ -0.36
HPS1-202ENST00000338546 C5orf56Q8N8D9 126 aa12.82□□□□□ -0.36
HPS1-202ENST00000338546 C15orf54Q8N8G6 183 aa12.82□□□□□ -0.36
HPS1-202ENST00000338546 FANCD2OSQ96PS1 177 aa12.82□□□□□ -0.36
HPS1-202ENST00000338546 SMIM7Q9BQ49 75 aa12.82□□□□□ -0.36
HPS1-202ENST00000338546 CXorf65A6NEN9 183 aa12.81□□□□□ -0.36
HPS1-202ENST00000338546 TSPAN4O14817 238 aa12.81□□□□□ -0.36
HPS1-202ENST00000338546 NUPL2O15504 423 aaKnown RBP12.81□□□□□ -0.36
HPS1-202ENST00000338546 HYPMO75409 117 aa12.81□□□□□ -0.36
HPS1-202ENST00000338546 SCGB2A1O75556 95 aa12.81□□□□□ -0.36
HPS1-202ENST00000338546 IGHV4-38-2P0DP08 117 aa12.81□□□□□ -0.36
HPS1-202ENST00000338546 FCGR2BP31994 310 aaPredicted RBP12.81□□□□□ -0.36
HPS1-202ENST00000338546 PATE2Q6UY27 113 aa12.81□□□□□ -0.36
HPS1-202ENST00000338546 FAM110DQ8TAY7 271 aaPredicted RBP12.81□□□□□ -0.36
HPS1-202ENST00000338546 PIFOQ8TCI5 191 aa12.81□□□□□ -0.36
HPS1-202ENST00000338546 FAM167A-AS1Q96KT0 104 aa12.81□□□□□ -0.36
HPS1-202ENST00000338546 UHRF2Q96PU4 802 aa12.81□□□□□ -0.36
HPS1-202ENST00000338546 TXN2Q99757 166 aa12.81□□□□□ -0.36
HPS1-202ENST00000338546 C20orf24Q9BUV8 137 aa12.81□□□□□ -0.36
HPS1-202ENST00000338546 TMEM242Q9NWH2 141 aa12.81□□□□□ -0.36
HPS1-202ENST00000338546 DOK5Q9P104 306 aa12.81□□□□□ -0.36
HPS1-202ENST00000338546 A0A0U1RQK1 487 aa12.81□□□□□ -0.36
HPS1-202ENST00000338546 A0A1W2PRE2 83 aa12.81□□□□□ -0.36
HPS1-202ENST00000338546 MFAP4P55083 255 aa12.81□□□□□ -0.36
HPS1-202ENST00000338546 KRTAP10-9P60411 292 aa12.81□□□□□ -0.36
HPS1-202ENST00000338546 AKIRIN2Q53H80 203 aa12.81□□□□□ -0.36
HPS1-202ENST00000338546 SLC25A2Q9BXI2 301 aa12.81□□□□□ -0.36
HPS1-202ENST00000338546 PARLQ9H300 379 aa12.81□□□□□ -0.36
HPS1-202ENST00000338546 TMA7Q9Y2S6 64 aaKnown RBP12.81□□□□□ -0.36
HPS1-202ENST00000338546 M0QZK8 103 aa12.8□□□□□ -0.36
HPS1-202ENST00000338546 OR7C2O60412 319 aa12.8□□□□□ -0.36
HPS1-202ENST00000338546 COL8A1P27658 744 aa12.8□□□□□ -0.36
HPS1-202ENST00000338546 CRIP2P52943 208 aaPredicted RBP12.8□□□□□ -0.36
HPS1-202ENST00000338546 UBE2G2P60604 165 aa12.8□□□□□ -0.36
HPS1-202ENST00000338546 YPEL3P61236 119 aaPredicted RBP12.8□□□□□ -0.36
HPS1-202ENST00000338546 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.8□□□□□ -0.364e-7■■■□□ 16.6
HPS1-202ENST00000338546 BRD3OSQ6XYD6 125 aa12.8□□□□□ -0.36
HPS1-202ENST00000338546 C16orf82Q7Z2V1 217 aa12.8□□□□□ -0.36
HPS1-202ENST00000338546 S100A7AQ86SG5 101 aa12.8□□□□□ -0.36
HPS1-202ENST00000338546 OR51G1Q8NGK1 321 aa12.8□□□□□ -0.36
HPS1-202ENST00000338546 VN1R17PQ8TDU5 208 aa12.8□□□□□ -0.36
HPS1-202ENST00000338546 C11orf52Q96A22 123 aa12.8□□□□□ -0.36
HPS1-202ENST00000338546 ZNF503Q96F45 646 aa12.8□□□□□ -0.36
HPS1-202ENST00000338546 SSX3Q99909 188 aa12.8□□□□□ -0.36
HPS1-202ENST00000338546 ATP5G3P48201 142 aa12.79□□□□□ -0.36
HPS1-202ENST00000338546 KLF17Q5JT82 389 aaPredicted RBP12.79□□□□□ -0.36
HPS1-202ENST00000338546 LINC00305Q7Z4B0 112 aa12.79□□□□□ -0.36
HPS1-202ENST00000338546 OR5AU1Q8NGC0 362 aa12.79□□□□□ -0.36
HPS1-202ENST00000338546 TMEM190Q8WZ59 177 aa12.79□□□□□ -0.36
HPS1-202ENST00000338546 HSPB9Q9BQS6 159 aa12.79□□□□□ -0.36
HPS1-202ENST00000338546 CTDSP1Q9GZU7 261 aa12.79□□□□□ -0.36
HPS1-202ENST00000338546 ZNF355PQ9NSJ1 428 aa12.79□□□□□ -0.36
HPS1-202ENST00000338546 PITPNC1Q9UKF7 332 aa12.79□□□□□ -0.36
HPS1-202ENST00000338546 YTHDF2Q9Y5A9 579 aaKnown RBP12.79□□□□□ -0.36
HPS1-202ENST00000338546 USP9YO00507 2555 aaPredicted RBP12.79□□□□□ -0.36
HPS1-202ENST00000338546 IGHV3OR16-10A0A075B7F0 116 aa12.78□□□□□ -0.36
HPS1-202ENST00000338546 IGHV3-21A0A0B4J1V1 117 aa12.78□□□□□ -0.36
HPS1-202ENST00000338546 TOMM40O96008 361 aa12.78□□□□□ -0.36
HPS1-202ENST00000338546 IGKV1-17P01599 117 aa12.78□□□□□ -0.36
HPS1-202ENST00000338546 RD3LP0DJH9 198 aa12.78□□□□□ -0.36
HPS1-202ENST00000338546 PSG1P11464 419 aa12.78□□□□□ -0.36
HPS1-202ENST00000338546 RPUSD4Q96CM3 377 aaKnown RBP12.78□□□□□ -0.36
HPS1-202ENST00000338546 PSMG3-AS1Q96PY0 264 aa12.78□□□□□ -0.36
HPS1-202ENST00000338546 TCEAL7Q9BRU2 100 aa12.78□□□□□ -0.36
HPS1-202ENST00000338546 OR51M1Q9H341 326 aa12.78□□□□□ -0.36
HPS1-202ENST00000338546 C21orf62Q9NYP8 219 aa12.78□□□□□ -0.36
HPS1-202ENST00000338546 ANKRD17O75179 2603 aaKnown RBP12.78□□□□□ -0.36
HPS1-202ENST00000338546 A6NDX4 124 aa12.77□□□□□ -0.36
HPS1-202ENST00000338546 COLCA2A8K830 154 aa12.77□□□□□ -0.36
HPS1-202ENST00000338546 ORM2P19652 201 aa12.77□□□□□ -0.36
HPS1-202ENST00000338546 NPPCP23582 126 aa12.77□□□□□ -0.36
HPS1-202ENST00000338546 TIGITQ495A1 244 aa12.77□□□□□ -0.36
HPS1-202ENST00000338546 UNQ5815/PRO19632Q6UWF5 114 aa12.77□□□□□ -0.36
HPS1-202ENST00000338546 OR1B1Q8NGR6 318 aa12.77□□□□□ -0.36
HPS1-202ENST00000338546 PAXXQ9BUH6 204 aa12.77□□□□□ -0.36
HPS1-202ENST00000338546 TMUB1Q9BVT8 246 aa12.77□□□□□ -0.36
HPS1-202ENST00000338546 HIGD1AQ9Y241 93 aa12.77□□□□□ -0.36
HPS1-202ENST00000338546 ATP6V0E1O15342 81 aa12.77□□□□□ -0.37
HPS1-202ENST00000338546 GNG7O60262 68 aa12.77□□□□□ -0.37
HPS1-202ENST00000338546 MT-ND4LP03901 98 aa12.77□□□□□ -0.37
HPS1-202ENST00000338546 ZNF674Q2M3X9 581 aa12.77□□□□□ -0.37
HPS1-202ENST00000338546 Q5PR19 223 aa12.77□□□□□ -0.37
HPS1-202ENST00000338546 OR5T1Q8NG75 326 aa12.77□□□□□ -0.37
HPS1-202ENST00000338546 ATP6V0BQ99437 205 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms