RNA–Protein interactions for RNA: ENST00000335508.10

SF3B1-201, Transcript of splicing factor 3b subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B1, Length 6,526 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-201ENST00000335508 GPR183P32249 361 aa5.59□□□□□ -1.51
SF3B1-201ENST00000335508 TM4SF20Q53R12 229 aa5.59□□□□□ -1.51
SF3B1-201ENST00000335508 C10orf55Q5SWW7 151 aa5.59□□□□□ -1.51
SF3B1-201ENST00000335508 CIARTQ8N365 385 aaPredicted RBP5.59□□□□□ -1.51
SF3B1-201ENST00000335508 ZNF439Q8NDP4 499 aa5.59□□□□□ -1.51
SF3B1-201ENST00000335508 DDB2Q92466 427 aa5.59□□□□□ -1.51
SF3B1-201ENST00000335508 ALPK3Q96L96 1907 aa5.59□□□□□ -1.51
SF3B1-201ENST00000335508 MFSD2BA6NFX1 497 aa5.59□□□□□ -1.52
SF3B1-201ENST00000335508 MFAP2P55001 183 aa5.59□□□□□ -1.52
SF3B1-201ENST00000335508 FAM3BP58499 235 aaPredicted RBP5.59□□□□□ -1.52
SF3B1-201ENST00000335508 CD81P60033 236 aa5.59□□□□□ -1.52
SF3B1-201ENST00000335508 IL15RAQ13261 267 aa5.59□□□□□ -1.52
SF3B1-201ENST00000335508 RNF212Q495C1 297 aa5.59□□□□□ -1.52
SF3B1-201ENST00000335508 TEX38Q6PEX7 206 aa5.59□□□□□ -1.52
SF3B1-201ENST00000335508 TRGV9Q99603 122 aa5.59□□□□□ -1.52
SF3B1-201ENST00000335508 ITPR3Q14573 2671 aa5.59□□□□□ -1.52
SF3B1-201ENST00000335508 ISLRO14498 428 aa5.58□□□□□ -1.52
SF3B1-201ENST00000335508 APELAP0DMC3 54 aa5.58□□□□□ -1.52
SF3B1-201ENST00000335508 CGB3P0DN86 165 aa5.58□□□□□ -1.52
SF3B1-201ENST00000335508 CGB7P0DN87 165 aa5.58□□□□□ -1.52
SF3B1-201ENST00000335508 PDZD11Q5EBL8 140 aa5.58□□□□□ -1.52
SF3B1-201ENST00000335508 TMEM88Q6PEY1 159 aa5.58□□□□□ -1.52
SF3B1-201ENST00000335508 Q6ZRM9 215 aa5.58□□□□□ -1.52
SF3B1-201ENST00000335508 C16orf92Q96LL3 132 aa5.58□□□□□ -1.52
SF3B1-201ENST00000335508 PARD6GQ9BYG4 376 aaPredicted RBP5.58□□□□□ -1.52
SF3B1-201ENST00000335508 PLXNB3Q9ULL4 1909 aa5.58□□□□□ -1.52
SF3B1-201ENST00000335508 MPTX1A8MV57 137 aa5.58□□□□□ -1.52
SF3B1-201ENST00000335508 FCN1O00602 326 aa5.58□□□□□ -1.52
SF3B1-201ENST00000335508 CR1LQ2VPA4 569 aa5.58□□□□□ -1.52
SF3B1-201ENST00000335508 OR11H6Q8NGC7 330 aa5.58□□□□□ -1.52
SF3B1-201ENST00000335508 MS4A10Q96PG2 267 aa5.58□□□□□ -1.52
SF3B1-201ENST00000335508 LYRM7Q5U5X0 104 aa5.58□□□□□ -1.52
SF3B1-201ENST00000335508 DENND4AQ7Z401 1863 aa5.58□□□□□ -1.52
SF3B1-201ENST00000335508 RAX2Q96IS3 184 aa5.58□□□□□ -1.52
SF3B1-201ENST00000335508 GGTLC1Q9BX51 225 aa5.58□□□□□ -1.52
SF3B1-201ENST00000335508 REG4Q9BYZ8 158 aa5.58□□□□□ -1.52
SF3B1-201ENST00000335508 PEMTQ9UBM1 199 aa5.58□□□□□ -1.52
SF3B1-201ENST00000335508 UFC1Q9Y3C8 167 aa5.58□□□□□ -1.52
SF3B1-201ENST00000335508 OR4C46A6NHA9 309 aa5.58□□□□□ -1.52
SF3B1-201ENST00000335508 IGLV1-47P01700 117 aa5.58□□□□□ -1.52
SF3B1-201ENST00000335508 CD99P14209 185 aa5.58□□□□□ -1.52
SF3B1-201ENST00000335508 IGFBP2P18065 325 aa5.58□□□□□ -1.52
SF3B1-201ENST00000335508 RIPPLY3P57055 190 aa5.58□□□□□ -1.52
SF3B1-201ENST00000335508 IFITM2Q01629 132 aa5.58□□□□□ -1.52
SF3B1-201ENST00000335508 TEX50A0A1B0GTY4 177 aa5.58□□□□□ -1.52
SF3B1-201ENST00000335508 ZNF705FA8MVS1 300 aaPredicted RBP5.58□□□□□ -1.52
SF3B1-201ENST00000335508 SEC14L6B5MCN3 397 aa5.58□□□□□ -1.52
SF3B1-201ENST00000335508 IGHV2-5P01817 119 aa5.58□□□□□ -1.52
SF3B1-201ENST00000335508 ZNF705DP0CH99 300 aaPredicted RBP5.58□□□□□ -1.52
SF3B1-201ENST00000335508 ZNF705BP0CI00 300 aaPredicted RBP5.58□□□□□ -1.52
SF3B1-201ENST00000335508 LYL1P12980 280 aa5.58□□□□□ -1.52
SF3B1-201ENST00000335508 GRNP28799 593 aaKnown RBP5.58□□□□□ -1.52
SF3B1-201ENST00000335508 HOXA4Q00056 320 aaPredicted RBP5.58□□□□□ -1.52
SF3B1-201ENST00000335508 PUSL1Q8N0Z8 303 aaKnown RBP5.58□□□□□ -1.52
SF3B1-201ENST00000335508 FAM24BQ8N5W8 94 aa5.58□□□□□ -1.52
SF3B1-201ENST00000335508 C10orf105Q8TEF2 133 aa5.58□□□□□ -1.52
SF3B1-201ENST00000335508 ATP6V0BQ99437 205 aa5.58□□□□□ -1.52
SF3B1-201ENST00000335508 LINC00574Q9H8X3 128 aa5.58□□□□□ -1.52
SF3B1-201ENST00000335508 YTHDF2Q9Y5A9 579 aaKnown RBP5.58□□□□□ -1.52
SF3B1-201ENST00000335508 CHD7Q9P2D1 2997 aa5.58□□□□□ -1.52
SF3B1-201ENST00000335508 ORM1P02763 201 aa5.57□□□□□ -1.52
SF3B1-201ENST00000335508 IGKV1-16P04430 117 aa5.57□□□□□ -1.52
SF3B1-201ENST00000335508 TCL1AP56279 114 aa5.57□□□□□ -1.52
SF3B1-201ENST00000335508 BIVMQ86UB2 503 aa5.57□□□□□ -1.52
SF3B1-201ENST00000335508 RPP25LQ8N5L8 163 aaKnown RBP5.57□□□□□ -1.52
SF3B1-201ENST00000335508 ZFP30Q9Y2G7 519 aa5.57□□□□□ -1.52
SF3B1-201ENST00000335508 IGHV3-21A0A0B4J1V1 117 aa5.57□□□□□ -1.52
SF3B1-201ENST00000335508 CTRB1P17538 263 aa5.57□□□□□ -1.52
SF3B1-201ENST00000335508 CTRB2Q6GPI1 263 aa5.57□□□□□ -1.52
SF3B1-201ENST00000335508 GPR61Q9BZJ8 451 aa5.57□□□□□ -1.52
SF3B1-201ENST00000335508 ZNF253O75346 499 aa5.57□□□□□ -1.52
SF3B1-201ENST00000335508 NDUFB8O95169 186 aa5.57□□□□□ -1.52
SF3B1-201ENST00000335508 NTF3P20783 257 aa5.57□□□□□ -1.52
SF3B1-201ENST00000335508 FHITP49789 147 aa5.57□□□□□ -1.52
SF3B1-201ENST00000335508 YPEL3P61236 119 aaPredicted RBP5.57□□□□□ -1.52
SF3B1-201ENST00000335508 SMAGPQ0VAQ4 97 aa5.57□□□□□ -1.52
SF3B1-201ENST00000335508 C9orf139Q6ZV77 190 aa5.57□□□□□ -1.52
SF3B1-201ENST00000335508 FA2HQ7L5A8 372 aa5.57□□□□□ -1.52
SF3B1-201ENST00000335508 NOL4LQ96MY1 436 aaPredicted RBP5.57□□□□□ -1.52
SF3B1-201ENST00000335508 TMEM14BQ9NUH8 114 aa5.57□□□□□ -1.52
SF3B1-201ENST00000335508 NBEAL1Q6ZS30 2694 aa5.57□□□□□ -1.52
SF3B1-201ENST00000335508 ELANEP08246 267 aa5.57□□□□□ -1.52
SF3B1-201ENST00000335508 RNASE2P10153 161 aaKnown RBP5.57□□□□□ -1.52
SF3B1-201ENST00000335508 SRD5A1P18405 259 aa5.57□□□□□ -1.52
SF3B1-201ENST00000335508 C15orf32Q32M92 178 aa5.57□□□□□ -1.52
SF3B1-201ENST00000335508 LYPD1Q8N2G4 141 aa5.57□□□□□ -1.52
SF3B1-201ENST00000335508 VN1R17PQ8TDU5 208 aa5.57□□□□□ -1.52
SF3B1-201ENST00000335508 TMEM37Q8WXS4 190 aa5.57□□□□□ -1.52
SF3B1-201ENST00000335508 ATG101Q9BSB4 218 aa5.57□□□□□ -1.52
SF3B1-201ENST00000335508 CTSZQ9UBR2 303 aa5.57□□□□□ -1.52
SF3B1-201ENST00000335508 HLA-DRB1P01911 266 aa5.57□□□□□ -1.52
SF3B1-201ENST00000335508 CCL20P78556 96 aa5.57□□□□□ -1.52
SF3B1-201ENST00000335508 C17orf58Q2M2W7 97 aa5.57□□□□□ -1.52
SF3B1-201ENST00000335508 DGAT2L7PQ6IED9 249 aa5.57□□□□□ -1.52
SF3B1-201ENST00000335508 ZNF833PQ6ZTB9 187 aa5.57□□□□□ -1.52
SF3B1-201ENST00000335508 LINC00305Q7Z4B0 112 aa5.57□□□□□ -1.52
SF3B1-201ENST00000335508 FAM103A1Q9BTL3 118 aaKnown RBP5.57□□□□□ -1.52
SF3B1-201ENST00000335508 CARHSP1Q9Y2V2 147 aaKnown RBP5.57□□□□□ -1.52
SF3B1-201ENST00000335508 SOX21Q9Y651 276 aaPredicted RBP5.57□□□□□ -1.52
SF3B1-201ENST00000335508 KIF26AQ9ULI4 1882 aaPredicted RBP5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms