RNA–Protein interactions for RNA: ENST00000328495.9

CCDC144A-201, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 2

Gene CCDC144A, Length 3,375 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-201ENST00000328495 TMEM241Q24JQ0 296 aa0.54□□□□□ -2.32
CCDC144A-201ENST00000328495 ZNF678Q5SXM1 525 aa0.54□□□□□ -2.32
CCDC144A-201ENST00000328495 ZNF470Q6ECI4 717 aa0.54□□□□□ -2.32
CCDC144A-201ENST00000328495 FOXI2Q6ZQN5 318 aa0.54□□□□□ -2.32
CCDC144A-201ENST00000328495 PLEKHG7Q6ZR37 379 aa0.54□□□□□ -2.32
CCDC144A-201ENST00000328495 C12orf45Q8N5I9 185 aaPredicted RBP0.54□□□□□ -2.32
CCDC144A-201ENST00000328495 ATPAF2Q8N5M1 289 aa0.54□□□□□ -2.32
CCDC144A-201ENST00000328495 DNAAF3Q8N9W5 541 aa0.54□□□□□ -2.32
CCDC144A-201ENST00000328495 OR4K2Q8NGD2 314 aa0.54□□□□□ -2.32
CCDC144A-201ENST00000328495 OR5K1Q8NHB7 308 aa0.54□□□□□ -2.32
CCDC144A-201ENST00000328495 SMIM12Q96EX1 92 aa0.54□□□□□ -2.32
CCDC144A-201ENST00000328495 SERPINB11Q96P15 392 aa0.54□□□□□ -2.32
CCDC144A-201ENST00000328495 TSC22D3Q99576 134 aa0.54□□□□□ -2.32
CCDC144A-201ENST00000328495 PRRT1Q99946 306 aa0.54□□□□□ -2.32
CCDC144A-201ENST00000328495 MED18Q9BUE0 208 aa0.54□□□□□ -2.32
CCDC144A-201ENST00000328495 KIFC1Q9BW19 673 aa0.54□□□□□ -2.32
CCDC144A-201ENST00000328495 PSTPIP2Q9H939 334 aa0.54□□□□□ -2.32
CCDC144A-201ENST00000328495 CXorf21Q9HAI6 301 aa0.54□□□□□ -2.32
CCDC144A-201ENST00000328495 PARVAQ9NVD7 372 aa0.54□□□□□ -2.32
CCDC144A-201ENST00000328495 NDUFB11Q9NX14 153 aa0.54□□□□□ -2.32
CCDC144A-201ENST00000328495 CLEC2DQ9UHP7 191 aa0.54□□□□□ -2.32
CCDC144A-201ENST00000328495 VPREB3Q9UKI3 123 aa0.54□□□□□ -2.32
CCDC144A-201ENST00000328495 ATP6V1DQ9Y5K8 247 aa0.54□□□□□ -2.32
CCDC144A-201ENST00000328495 SNX10Q9Y5X0 201 aa0.54□□□□□ -2.32
CCDC144A-201ENST00000328495 CSMD3Q7Z407 3707 aa0.54□□□□□ -2.32
CCDC144A-201ENST00000328495 IGKV1-27A0A075B6S5 117 aa0.54□□□□□ -2.32
CCDC144A-201ENST00000328495 IGHV1-45A0A0A0MS14 117 aa0.54□□□□□ -2.32
CCDC144A-201ENST00000328495 TRAV8-3A0A0A6YYJ7 113 aa0.54□□□□□ -2.32
CCDC144A-201ENST00000328495 IGKV2-29A2NJV5 120 aaPredicted RBP0.54□□□□□ -2.32
CCDC144A-201ENST00000328495 A6NED7 52 aa0.54□□□□□ -2.32
CCDC144A-201ENST00000328495 GGTLC3B5MD39 225 aa0.54□□□□□ -2.32
CCDC144A-201ENST00000328495 TEX46H3BTG2 121 aa0.54□□□□□ -2.32
CCDC144A-201ENST00000328495 K7EP13 123 aa0.54□□□□□ -2.32
CCDC144A-201ENST00000328495 KPNA3O00505 521 aaPredicted RBP0.54□□□□□ -2.32
CCDC144A-201ENST00000328495 COCHO43405 550 aa0.54□□□□□ -2.32
CCDC144A-201ENST00000328495 SLC25A20O43772 301 aa0.54□□□□□ -2.32
CCDC144A-201ENST00000328495 NIPSNAP2O75323 286 aa0.54□□□□□ -2.32
CCDC144A-201ENST00000328495 DHRS3O75911 302 aa0.54□□□□□ -2.32
CCDC144A-201ENST00000328495 CPSF4O95639 269 aaKnown RBP0.54□□□□□ -2.32
CCDC144A-201ENST00000328495 HAND1O96004 215 aa0.54□□□□□ -2.32
CCDC144A-201ENST00000328495 IGLV3-27P01718 113 aa0.54□□□□□ -2.32
CCDC144A-201ENST00000328495 IGHMP01871 453 aa0.54□□□□□ -2.32
CCDC144A-201ENST00000328495 ORM1P02763 201 aa0.54□□□□□ -2.32
CCDC144A-201ENST00000328495 OPN1SWP03999 348 aa0.54□□□□□ -2.32
CCDC144A-201ENST00000328495 TYMSP04818 313 aa0.54□□□□□ -2.32
CCDC144A-201ENST00000328495 REG1AP05451 166 aa0.54□□□□□ -2.32
CCDC144A-201ENST00000328495 SPNP16150 400 aa0.54□□□□□ -2.32
CCDC144A-201ENST00000328495 CD200P41217 278 aa0.54□□□□□ -2.32
CCDC144A-201ENST00000328495 MAGEA2P43356 314 aa0.54□□□□□ -2.32
CCDC144A-201ENST00000328495 HAAOP46952 286 aa0.54□□□□□ -2.32
CCDC144A-201ENST00000328495 IDH3GP51553 393 aaPredicted RBP0.54□□□□□ -2.32
CCDC144A-201ENST00000328495 CMC4P56277 68 aaPredicted RBP0.54□□□□□ -2.32
CCDC144A-201ENST00000328495 CARD18P57730 90 aa0.54□□□□□ -2.32
CCDC144A-201ENST00000328495 XIAPP98170 497 aa0.54□□□□□ -2.32
CCDC144A-201ENST00000328495 TRAM1Q15629 374 aa0.54□□□□□ -2.32
CCDC144A-201ENST00000328495 TRMT12Q53H54 448 aaKnown RBP0.54□□□□□ -2.32
CCDC144A-201ENST00000328495 PDZD11Q5EBL8 140 aa0.54□□□□□ -2.32
CCDC144A-201ENST00000328495 PABPC1L2AQ5JQF8 200 aa0.54□□□□□ -2.32
CCDC144A-201ENST00000328495 PSMG4Q5JS54 123 aa0.54□□□□□ -2.32
CCDC144A-201ENST00000328495 NIPAL1Q6NVV3 410 aa0.54□□□□□ -2.32
CCDC144A-201ENST00000328495 Q6Q795 121 aa0.54□□□□□ -2.32
CCDC144A-201ENST00000328495 DRAM2Q6UX65 266 aa0.54□□□□□ -2.32
CCDC144A-201ENST00000328495 FAM183BPQ6ZVS7 135 aa0.54□□□□□ -2.32
CCDC144A-201ENST00000328495 ZNF767PQ75MW2 155 aa0.54□□□□□ -2.32
CCDC144A-201ENST00000328495 DHFR2Q86XF0 187 aa0.54□□□□□ -2.32
CCDC144A-201ENST00000328495 HS3ST5Q8IZT8 346 aa0.54□□□□□ -2.32
CCDC144A-201ENST00000328495 ZNF567Q8N184 647 aa0.54□□□□□ -2.32
CCDC144A-201ENST00000328495 Q8N402 240 aa0.54□□□□□ -2.32
CCDC144A-201ENST00000328495 OR51D1Q8NGF3 324 aa0.54□□□□□ -2.32
CCDC144A-201ENST00000328495 OR2K2Q8NGT1 345 aa0.54□□□□□ -2.32
CCDC144A-201ENST00000328495 DYNC2LI1Q8TCX1 351 aa0.54□□□□□ -2.32
CCDC144A-201ENST00000328495 CYGBQ8WWM9 190 aa0.54□□□□□ -2.32
CCDC144A-201ENST00000328495 GPR146Q96CH1 333 aa0.54□□□□□ -2.32
CCDC144A-201ENST00000328495 CYTH2Q99418 400 aa0.54□□□□□ -2.32
CCDC144A-201ENST00000328495 PRSS27Q9BQR3 290 aa0.54□□□□□ -2.32
CCDC144A-201ENST00000328495 TAPBPLQ9BX59 468 aa0.54□□□□□ -2.32
CCDC144A-201ENST00000328495 C1QTNF6Q9BXI9 259 aa0.54□□□□□ -2.32
CCDC144A-201ENST00000328495 MS4A8Q9BY19 250 aa0.54□□□□□ -2.32
CCDC144A-201ENST00000328495 NAA50Q9GZZ1 169 aaKnown RBP0.54□□□□□ -2.32
CCDC144A-201ENST00000328495 NSRP1Q9H0G5 558 aaKnown RBP0.54□□□□□ -2.32
CCDC144A-201ENST00000328495 TLNRD1Q9H1K6 362 aa0.54□□□□□ -2.32
CCDC144A-201ENST00000328495 OR2AG1Q9H205 316 aa0.54□□□□□ -2.32
CCDC144A-201ENST00000328495 TMEM106BQ9NUM4 274 aa0.54□□□□□ -2.32
CCDC144A-201ENST00000328495 ARMC1Q9NVT9 282 aa0.54□□□□□ -2.32
CCDC144A-201ENST00000328495 ATPIF1Q9UII2 106 aa0.54□□□□□ -2.32
CCDC144A-201ENST00000328495 POMPQ9Y244 141 aa0.54□□□□□ -2.32
CCDC144A-201ENST00000328495 C15orf41Q9Y2V0 281 aa0.54□□□□□ -2.32
CCDC144A-201ENST00000328495 WASHC3Q9Y3C0 194 aa0.54□□□□□ -2.32
CCDC144A-201ENST00000328495 IGHV2-26A0A0B4J1V2 119 aa0.53□□□□□ -2.32
CCDC144A-201ENST00000328495 TRAV5A0A0B4J249 113 aa0.53□□□□□ -2.32
CCDC144A-201ENST00000328495 TRGV4A0A0C4DH28 118 aa0.53□□□□□ -2.32
CCDC144A-201ENST00000328495 TEX50A0A1B0GTY4 177 aa0.53□□□□□ -2.32
CCDC144A-201ENST00000328495 DHRS12A0PJE2 317 aa0.53□□□□□ -2.32
CCDC144A-201ENST00000328495 NUPR2A6NF83 97 aa0.53□□□□□ -2.32
CCDC144A-201ENST00000328495 OR2AG2A6NM03 316 aa0.53□□□□□ -2.32
CCDC144A-201ENST00000328495 B4DEV8 164 aa0.53□□□□□ -2.32
CCDC144A-201ENST00000328495 TRAPPC3O43617 180 aa0.53□□□□□ -2.32
CCDC144A-201ENST00000328495 SULT1B1O43704 296 aa0.53□□□□□ -2.32
CCDC144A-201ENST00000328495 PSMG1O95456 288 aa0.53□□□□□ -2.32
CCDC144A-201ENST00000328495 IFNA5P01569 189 aa0.53□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms