RNA–Protein interactions for RNA: ENST00000323959.8

CSTF3-201, Transcript of cleavage stimulation factor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF3, Length 2,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-201ENST00000323959 RNF150Q9ULK6 438 aa5.06□□□□□ -1.6
CSTF3-201ENST00000323959 COLCA2A8K830 154 aa5.05□□□□□ -1.6
CSTF3-201ENST00000323959 S1PR2O95136 353 aa5.05□□□□□ -1.6
CSTF3-201ENST00000323959 CRYGBP07316 175 aa5.05□□□□□ -1.6
CSTF3-201ENST00000323959 RAB4AP20338 218 aa5.05□□□□□ -1.6
CSTF3-201ENST00000323959 LGALS7P47929 136 aa5.05□□□□□ -1.6
CSTF3-201ENST00000323959 UBE2KP61086 200 aa5.05□□□□□ -1.6
CSTF3-201ENST00000323959 SLC35B1P78383 322 aa5.05□□□□□ -1.6
CSTF3-201ENST00000323959 FABP9Q0Z7S8 132 aa5.05□□□□□ -1.6
CSTF3-201ENST00000323959 RTL8BQ17RB0 113 aa5.05□□□□□ -1.6
CSTF3-201ENST00000323959 DNLZQ5SXM8 178 aa5.05□□□□□ -1.6
CSTF3-201ENST00000323959 MINOS1Q5TGZ0 78 aa5.05□□□□□ -1.6
CSTF3-201ENST00000323959 HCP5Q6MZN7 132 aa5.05□□□□□ -1.6
CSTF3-201ENST00000323959 IL34Q6ZMJ4 242 aa5.05□□□□□ -1.6
CSTF3-201ENST00000323959 ZNF383Q8NA42 475 aa5.05□□□□□ -1.6
CSTF3-201ENST00000323959 VSTM2AQ8TAG5 236 aa5.05□□□□□ -1.6
CSTF3-201ENST00000323959 GNPNAT1Q96EK6 184 aaPredicted RBP5.05□□□□□ -1.6
CSTF3-201ENST00000323959 PRR13Q9NZ81 148 aa5.05□□□□□ -1.6
CSTF3-201ENST00000323959 PRNDQ9UKY0 176 aa5.05□□□□□ -1.6
CSTF3-201ENST00000323959 MINOS1-NBL1R4GNA1 71 aa5.05□□□□□ -1.6
CSTF3-201ENST00000323959 SORL1Q92673 2214 aa5.05□□□□□ -1.6
CSTF3-201ENST00000323959 TRAV1-1A0A0B4J248 108 aa5.05□□□□□ -1.6
CSTF3-201ENST00000323959 TRAV39A0A0B4J263 110 aa5.05□□□□□ -1.6
CSTF3-201ENST00000323959 PRSS46E5RG02 174 aa5.05□□□□□ -1.6
CSTF3-201ENST00000323959 H0YJW9 148 aa5.05□□□□□ -1.6
CSTF3-201ENST00000323959 ZNF205O95201 554 aa5.05□□□□□ -1.6
CSTF3-201ENST00000323959 CD81P60033 236 aa5.05□□□□□ -1.6
CSTF3-201ENST00000323959 EBI3Q14213 229 aa5.05□□□□□ -1.6
CSTF3-201ENST00000323959 HLA-DRB5Q30154 266 aa5.05□□□□□ -1.6
CSTF3-201ENST00000323959 C9orf152Q5JTZ5 239 aa5.05□□□□□ -1.6
CSTF3-201ENST00000323959 TMEM219Q86XT9 240 aa5.05□□□□□ -1.6
CSTF3-201ENST00000323959 LYPD1Q8N2G4 141 aa5.05□□□□□ -1.6
CSTF3-201ENST00000323959 ZNF114Q8NC26 417 aa5.05□□□□□ -1.6
CSTF3-201ENST00000323959 OR5B3Q8NH48 314 aa5.05□□□□□ -1.6
CSTF3-201ENST00000323959 TMEM167AQ8TBQ9 72 aa5.05□□□□□ -1.6
CSTF3-201ENST00000323959 C14orf144Q96I85 54 aa5.05□□□□□ -1.6
CSTF3-201ENST00000323959 ATP5SQ99766 215 aa5.05□□□□□ -1.6
CSTF3-201ENST00000323959 CACNG5Q9UF02 275 aa5.05□□□□□ -1.6
CSTF3-201ENST00000323959 FBXL17Q9UF56 701 aa5.05□□□□□ -1.6
CSTF3-201ENST00000323959 TBL2Q9Y4P3 447 aaKnown RBP5.05□□□□□ -1.6
CSTF3-201ENST00000323959 RBM7Q9Y580 266 aaKnown RBP5.05□□□□□ -1.6
CSTF3-201ENST00000323959 IGSF23A1L1A6 192 aa5.04□□□□□ -1.6
CSTF3-201ENST00000323959 TMEM50AO95807 157 aa5.04□□□□□ -1.6
CSTF3-201ENST00000323959 TFF1P04155 84 aa5.04□□□□□ -1.6
CSTF3-201ENST00000323959 NDUFB7P17568 137 aa5.04□□□□□ -1.6
CSTF3-201ENST00000323959 CDX1P47902 265 aaPredicted RBP5.04□□□□□ -1.6
CSTF3-201ENST00000323959 HBG1P69891 147 aa5.04□□□□□ -1.6
CSTF3-201ENST00000323959 HBG2P69892 147 aa5.04□□□□□ -1.6
CSTF3-201ENST00000323959 HOXA4Q00056 320 aaPredicted RBP5.04□□□□□ -1.6
CSTF3-201ENST00000323959 C10orf99Q6UWK7 81 aa5.04□□□□□ -1.6
CSTF3-201ENST00000323959 H2BFWTQ7Z2G1 175 aa5.04□□□□□ -1.6
CSTF3-201ENST00000323959 TPRX1Q8N7U7 411 aa5.04□□□□□ -1.6
CSTF3-201ENST00000323959 TEX45Q8NA69 505 aa5.04□□□□□ -1.6
CSTF3-201ENST00000323959 NEU1Q99519 415 aa5.04□□□□□ -1.6
CSTF3-201ENST00000323959 C2orf88Q9BSF0 95 aa5.04□□□□□ -1.6
CSTF3-201ENST00000323959 CLEC7AQ9BXN2 247 aa5.04□□□□□ -1.6
CSTF3-201ENST00000323959 GSKIPQ9P0R6 139 aa5.04□□□□□ -1.6
CSTF3-201ENST00000323959 KIAA1456Q9P272 454 aa5.04□□□□□ -1.6
CSTF3-201ENST00000323959 UPK2O00526 184 aa5.04□□□□□ -1.6
CSTF3-201ENST00000323959 MPDU1O75352 247 aa5.04□□□□□ -1.6
CSTF3-201ENST00000323959 MMP23AO75900 390 aa5.04□□□□□ -1.6
CSTF3-201ENST00000323959 CNIH1O95406 144 aa5.04□□□□□ -1.6
CSTF3-201ENST00000323959 MT-ND4LP03901 98 aa5.04□□□□□ -1.6
CSTF3-201ENST00000323959 SNRNP70P08621 437 aaKnown RBP5.04□□□□□ -1.6
CSTF3-201ENST00000323959 S100A10P60903 97 aa5.04□□□□□ -1.6
CSTF3-201ENST00000323959 ERVK-16P61578 105 aa5.04□□□□□ -1.6
CSTF3-201ENST00000323959 VAMP2P63027 116 aa5.04□□□□□ -1.6
CSTF3-201ENST00000323959 SERF2P84101 59 aa5.04□□□□□ -1.6
CSTF3-201ENST00000323959 CXorf66Q5JRM2 361 aaPredicted RBP5.04□□□□□ -1.6
CSTF3-201ENST00000323959 PRAMEF5Q5TYX0 476 aa5.04□□□□□ -1.6
CSTF3-201ENST00000323959 THNSL2Q86YJ6 484 aa5.04□□□□□ -1.6
CSTF3-201ENST00000323959 BOLLQ8N9W6 283 aaKnown RBP5.04□□□□□ -1.6
CSTF3-201ENST00000323959 OR13D1Q8NGV5 346 aa5.04□□□□□ -1.6
CSTF3-201ENST00000323959 TMEM190Q8WZ59 177 aa5.04□□□□□ -1.6
CSTF3-201ENST00000323959 DUX3Q96PT4 197 aa5.04□□□□□ -1.6
CSTF3-201ENST00000323959 RBKSQ9H477 322 aa5.04□□□□□ -1.6
CSTF3-201ENST00000323959 LSM5Q9Y4Y9 91 aaKnown RBP5.04□□□□□ -1.6
CSTF3-201ENST00000323959 IGHV2-26A0A0B4J1V2 119 aa5.04□□□□□ -1.6
CSTF3-201ENST00000323959 IGHV3-64DA0A0J9YX35 117 aa5.04□□□□□ -1.6
CSTF3-201ENST00000323959 M0R1X1 148 aa5.04□□□□□ -1.6
CSTF3-201ENST00000323959 TNFSF12O43508 249 aa5.04□□□□□ -1.6
CSTF3-201ENST00000323959 IGLV2-23P01705 113 aa5.04□□□□□ -1.6
CSTF3-201ENST00000323959 APOA2P02652 100 aa5.04□□□□□ -1.6
CSTF3-201ENST00000323959 ADCYAP1P18509 176 aa5.04□□□□□ -1.6
CSTF3-201ENST00000323959 CD1BP29016 333 aa5.04□□□□□ -1.6
CSTF3-201ENST00000323959 PRCDQ00LT1 54 aa5.04□□□□□ -1.6
CSTF3-201ENST00000323959 BTNL8Q6UX41 500 aa5.04□□□□□ -1.6
CSTF3-201ENST00000323959 LCNL1Q6ZST4 164 aa5.04□□□□□ -1.6
CSTF3-201ENST00000323959 WFDC3Q8IUB2 231 aa5.04□□□□□ -1.6
CSTF3-201ENST00000323959 PRR18Q8N4B5 295 aa5.04□□□□□ -1.6
CSTF3-201ENST00000323959 OR1S2Q8NGQ3 325 aa5.04□□□□□ -1.6
CSTF3-201ENST00000323959 PINX1Q96BK5 328 aaKnown RBP5.04□□□□□ -1.6
CSTF3-201ENST00000323959 ZNF471Q9BX82 626 aaPredicted RBP5.04□□□□□ -1.6
CSTF3-201ENST00000323959 WASHC3Q9Y3C0 194 aa5.04□□□□□ -1.6
CSTF3-201ENST00000323959 BUB1B-PAK6H3BSN5 160 aa5.03□□□□□ -1.6
CSTF3-201ENST00000323959 M0QZK8 103 aa5.03□□□□□ -1.6
CSTF3-201ENST00000323959 NPBWR1P48145 328 aa5.03□□□□□ -1.6
CSTF3-201ENST00000323959 AKR1C2P52895 323 aa5.03□□□□□ -1.6
CSTF3-201ENST00000323959 HSPE1P61604 102 aaKnown RBP5.03□□□□□ -1.6
CSTF3-201ENST00000323959 DLK1P80370 383 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 116.1 ms