RNA–Protein interactions for RNA: ENST00000321728.11

PRKCB-202, Transcript of protein kinase C beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRKCB, Length 2,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-202ENST00000321728 TOX4O94842 621 aa14.51□□□□□ -0.09
PRKCB-202ENST00000321728 IGHV3-48P01763 117 aa14.51□□□□□ -0.09
PRKCB-202ENST00000321728 OR1L8Q8NGR8 309 aa14.51□□□□□ -0.09
PRKCB-202ENST00000321728 ARRDC1-AS1Q9H2J1 176 aa14.51□□□□□ -0.09
PRKCB-202ENST00000321728 TIMM8BQ9Y5J9 83 aaPredicted RBP14.51□□□□□ -0.09
PRKCB-202ENST00000321728 KBTBD11-OT1A0A1B0GTJ5 212 aa14.5□□□□□ -0.09
PRKCB-202ENST00000321728 FAM201AQ5SY85 155 aa14.5□□□□□ -0.09
PRKCB-202ENST00000321728 ARFGEF3Q5TH69 2177 aa14.5□□□□□ -0.09
PRKCB-202ENST00000321728 MOGAT3Q86VF5 341 aa14.5□□□□□ -0.09
PRKCB-202ENST00000321728 CACNA1GO43497 2377 aa14.5□□□□□ -0.09
PRKCB-202ENST00000321728 ZNF137PP52743 207 aa14.5□□□□□ -0.09
PRKCB-202ENST00000321728 SPRNQ5BIV9 151 aa14.5□□□□□ -0.09
PRKCB-202ENST00000321728 PGLYRP4Q96LB8 373 aa14.5□□□□□ -0.09
PRKCB-202ENST00000321728 SLC25A5P05141 298 aaKnown RBP14.49□□□□□ -0.09
PRKCB-202ENST00000321728 BLNKQ8WV28 456 aa14.49□□□□□ -0.09
PRKCB-202ENST00000321728 CHCHD1Q96BP2 118 aaKnown RBP14.49□□□□□ -0.09
PRKCB-202ENST00000321728 ZNF714Q96N38 554 aa14.49□□□□□ -0.09
PRKCB-202ENST00000321728 ROS1P08922 2347 aa14.49□□□□□ -0.09
PRKCB-202ENST00000321728 LOC102724200A0A096LPH7 203 aaPredicted RBP14.49□□□□□ -0.09
PRKCB-202ENST00000321728 SAA1P0DJI8 122 aaPredicted RBP14.49□□□□□ -0.09
PRKCB-202ENST00000321728 CGB3P0DN86 165 aa14.49□□□□□ -0.09
PRKCB-202ENST00000321728 CGB7P0DN87 165 aa14.49□□□□□ -0.09
PRKCB-202ENST00000321728 ATP5IP56385 69 aaPredicted RBP14.49□□□□□ -0.09
PRKCB-202ENST00000321728 RND1Q92730 232 aa14.49□□□□□ -0.09
PRKCB-202ENST00000321728 RAB9BQ9NP90 201 aa14.49□□□□□ -0.09
PRKCB-202ENST00000321728 ZNRD1Q9P1U0 126 aa14.49□□□□□ -0.09
PRKCB-202ENST00000321728 BDP1A6H8Y1 2624 aa14.49□□□□□ -0.09
PRKCB-202ENST00000321728 DLL1O00548 723 aa14.49□□□□□ -0.09
PRKCB-202ENST00000321728 CT45A6P0DMU7 189 aa14.49□□□□□ -0.09
PRKCB-202ENST00000321728 CT45A5P0DMU8 189 aa14.49□□□□□ -0.09
PRKCB-202ENST00000321728 CT45A7P0DMV0 189 aa14.49□□□□□ -0.09
PRKCB-202ENST00000321728 OR1L4Q8NGR5 311 aa14.49□□□□□ -0.09
PRKCB-202ENST00000321728 RPP21Q9H633 154 aaKnown RBP14.49□□□□□ -0.09
PRKCB-202ENST00000321728 C7orf69Q9H7B7 122 aa14.49□□□□□ -0.09
PRKCB-202ENST00000321728 A0A087X0K7 114 aa14.48□□□□□ -0.09
PRKCB-202ENST00000321728 BPIFB3P59826 476 aa14.48□□□□□ -0.09
PRKCB-202ENST00000321728 RPS20P60866 119 aaKnown RBP14.48□□□□□ -0.09
PRKCB-202ENST00000321728 ERHP84090 104 aaKnown RBP14.48□□□□□ -0.09
PRKCB-202ENST00000321728 PSG9Q00887 426 aa14.48□□□□□ -0.09
PRKCB-202ENST00000321728 MBNL2Q5VZF2 373 aaKnown RBP14.48□□□□□ -0.09
PRKCB-202ENST00000321728 DUX4L9Q6RFH8 374 aaPredicted RBP14.48□□□□□ -0.09
PRKCB-202ENST00000321728 PATE2Q6UY27 113 aa14.48□□□□□ -0.09
PRKCB-202ENST00000321728 CACNG8Q8WXS5 425 aa14.48□□□□□ -0.09
PRKCB-202ENST00000321728 FXYD5Q96DB9 178 aa14.48□□□□□ -0.09
PRKCB-202ENST00000321728 MAP1LC3CQ9BXW4 147 aa14.48□□□□□ -0.09
PRKCB-202ENST00000321728 SPRY4Q9C004 299 aa14.48□□□□□ -0.09
PRKCB-202ENST00000321728 C1RLQ9NZP8 487 aa14.48□□□□□ -0.09
PRKCB-202ENST00000321728 INTS1Q8N201 2190 aaKnown RBP14.48□□□□□ -0.09
PRKCB-202ENST00000321728 ACP1P24666 158 aa14.48□□□□□ -0.09
PRKCB-202ENST00000321728 ZNF138P52744 262 aa14.48□□□□□ -0.09
PRKCB-202ENST00000321728 VWA1Q6PCB0 445 aa14.48□□□□□ -0.09
PRKCB-202ENST00000321728 DHRS13Q6UX07 377 aa14.48□□□□□ -0.09
PRKCB-202ENST00000321728 PDPNQ86YL7 162 aa14.48□□□□□ -0.09
PRKCB-202ENST00000321728 NPIPB3Q92617 1050 aa14.48□□□□□ -0.09
PRKCB-202ENST00000321728 PMCHL2Q9BQD1 86 aa14.48□□□□□ -0.09
PRKCB-202ENST00000321728 EPDR1Q9UM22 224 aa14.48□□□□□ -0.09
PRKCB-202ENST00000321728 EP300Q09472 2414 aaPredicted RBP14.47□□□□□ -0.09
PRKCB-202ENST00000321728 HES3Q5TGS1 186 aa14.47□□□□□ -0.09
PRKCB-202ENST00000321728 RBMXL3Q8N7X1 1067 aaKnown RBP14.47□□□□□ -0.09
PRKCB-202ENST00000321728 SCRT2Q9NQ03 307 aa14.47□□□□□ -0.09
PRKCB-202ENST00000321728 DSCAMO60469 2012 aa14.47□□□□□ -0.09
PRKCB-202ENST00000321728 A8MWL6 223 aa14.47□□□□□ -0.09
PRKCB-202ENST00000321728 S100A7P31151 101 aa14.47□□□□□ -0.09
PRKCB-202ENST00000321728 LINC00322Q6ZN03 302 aaPredicted RBP14.47□□□□□ -0.09
PRKCB-202ENST00000321728 LINC00305Q7Z4B0 112 aa14.47□□□□□ -0.09
PRKCB-202ENST00000321728 LHFPL4Q7Z7J7 247 aa14.47□□□□□ -0.09
PRKCB-202ENST00000321728 GTSF1Q8WW33 167 aa14.47□□□□□ -0.09
PRKCB-202ENST00000321728 COL27A1Q8IZC6 1860 aaPredicted RBP14.47□□□□□ -0.09
PRKCB-202ENST00000321728 MGAQ8IWI9 3026 aa14.46□□□□□ -0.09
PRKCB-202ENST00000321728 NAV3Q8IVL0 2385 aa14.46□□□□□ -0.09
PRKCB-202ENST00000321728 GAGE12BA1L429 117 aa14.46□□□□□ -0.09
PRKCB-202ENST00000321728 PGPA6NDG6 321 aa14.46□□□□□ -0.09
PRKCB-202ENST00000321728 P01737 135 aa14.46□□□□□ -0.09
PRKCB-202ENST00000321728 REG1BP48304 166 aa14.46□□□□□ -0.09
PRKCB-202ENST00000321728 C1orf210Q8IVY1 113 aa14.46□□□□□ -0.09
PRKCB-202ENST00000321728 GPR82Q96P67 336 aa14.46□□□□□ -0.09
PRKCB-202ENST00000321728 CHEK1O14757 476 aa14.46□□□□□ -0.1
PRKCB-202ENST00000321728 MOSP00540 346 aa14.46□□□□□ -0.1
PRKCB-202ENST00000321728 LIPFP07098 398 aa14.46□□□□□ -0.1
PRKCB-202ENST00000321728 SRSF6Q13247 344 aaKnown RBP14.46□□□□□ -0.1
PRKCB-202ENST00000321728 DEFB108BQ8NET1 73 aa14.46□□□□□ -0.1
PRKCB-202ENST00000321728 ZNF430Q9H8G1 570 aaPredicted RBP14.46□□□□□ -0.1
PRKCB-202ENST00000321728 DMXL2Q8TDJ6 3036 aa14.45□□□□□ -0.1
PRKCB-202ENST00000321728 CNOT1A5YKK6 2376 aaKnown RBP14.45□□□□□ -0.1
PRKCB-202ENST00000321728 TMEM265A0A087WTH1 108 aa14.45□□□□□ -0.1
PRKCB-202ENST00000321728 IGHV1-18A0A0C4DH31 117 aa14.45□□□□□ -0.1
PRKCB-202ENST00000321728 SPRY3O43610 288 aa14.45□□□□□ -0.1
PRKCB-202ENST00000321728 TMEM177Q53S58 311 aa14.45□□□□□ -0.1
PRKCB-202ENST00000321728 CD5LO43866 347 aa14.45□□□□□ -0.1
PRKCB-202ENST00000321728 ORM2P19652 201 aa14.45□□□□□ -0.1
PRKCB-202ENST00000321728 MSMPQ1L6U9 139 aa14.45□□□□□ -0.1
PRKCB-202ENST00000321728 DAZAP1Q96EP5 407 aaKnown RBP14.45□□□□□ -0.1
PRKCB-202ENST00000321728 HARBI1Q96MB7 349 aa14.45□□□□□ -0.1
PRKCB-202ENST00000321728 DSCAML1Q8TD84 2053 aa14.44□□□□□ -0.1
PRKCB-202ENST00000321728 TRAV8-6A0A0B4J262 113 aa14.44□□□□□ -0.1
PRKCB-202ENST00000321728 CSN3P07498 182 aa14.44□□□□□ -0.1
PRKCB-202ENST00000321728 HIST1H1AQ02539 215 aaPredicted RBP14.44□□□□□ -0.1
PRKCB-202ENST00000321728 TMEM164Q5U3C3 297 aa14.44□□□□□ -0.1
PRKCB-202ENST00000321728 FNDC4Q9H6D8 234 aaPredicted RBP14.44□□□□□ -0.1
PRKCB-202ENST00000321728 DMXL1Q9Y485 3027 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms