RNA–Protein interactions for RNA: ENST00000320081.9

CLIP4-201, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP4, Length 4,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-201ENST00000320081 C1orf162Q8NEQ5 155 aaPredicted RBP13.6□□□□□ -0.23
CLIP4-201ENST00000320081 CFAP54Q96N23 3096 aa13.6□□□□□ -0.23
CLIP4-201ENST00000320081 ZNF124Q15973 351 aa13.6□□□□□ -0.23
CLIP4-201ENST00000320081 TMEM78Q5T7P6 136 aa13.6□□□□□ -0.23
CLIP4-201ENST00000320081 SPSB3Q6PJ21 355 aa13.6□□□□□ -0.23
CLIP4-201ENST00000320081 OR2T8A6NH00 312 aa13.59□□□□□ -0.23
CLIP4-201ENST00000320081 SH2D7A6NKC9 451 aaPredicted RBP13.59□□□□□ -0.23
CLIP4-201ENST00000320081 ATP5J2P56134 94 aa13.59□□□□□ -0.23
CLIP4-201ENST00000320081 GRAMD2BQ96HH9 432 aa13.59□□□□□ -0.23
CLIP4-201ENST00000320081 IL36BQ9NZH7 164 aa13.59□□□□□ -0.23
CLIP4-201ENST00000320081 WISP2O76076 250 aa13.59□□□□□ -0.23
CLIP4-201ENST00000320081 FAM106CPP0CH98 169 aa13.59□□□□□ -0.23
CLIP4-201ENST00000320081 COX19Q49B96 90 aa13.59□□□□□ -0.23
CLIP4-201ENST00000320081 GTF2H5Q6ZYL4 71 aa13.59□□□□□ -0.23
CLIP4-201ENST00000320081 DPM3Q9P2X0 92 aa13.59□□□□□ -0.23
CLIP4-201ENST00000320081 LINC00312Q9Y6C7 94 aa13.59□□□□□ -0.23
CLIP4-201ENST00000320081 VENTXO95231 258 aa13.59□□□□□ -0.23
CLIP4-201ENST00000320081 RNASE6Q93091 150 aaKnown RBP13.59□□□□□ -0.23
CLIP4-201ENST00000320081 DPRXA6NFQ7 191 aa13.59□□□□□ -0.23
CLIP4-201ENST00000320081 B9A039 149 aa13.59□□□□□ -0.23
CLIP4-201ENST00000320081 KLRD1Q13241 179 aa13.59□□□□□ -0.23
CLIP4-201ENST00000320081 FAM74A4Q5TZK3 123 aa13.59□□□□□ -0.23
CLIP4-201ENST00000320081 WFDC12Q8WWY7 111 aa13.59□□□□□ -0.23
CLIP4-201ENST00000320081 COL4A3Q01955 1670 aa13.58□□□□□ -0.24
CLIP4-201ENST00000320081 SIAH2O43255 324 aa13.58□□□□□ -0.24
CLIP4-201ENST00000320081 TUBA4BQ9H853 241 aa13.58□□□□□ -0.24
CLIP4-201ENST00000320081 GGCTO75223 188 aaKnown RBP13.58□□□□□ -0.24
CLIP4-201ENST00000320081 LYPD2Q6UXB3 125 aa13.58□□□□□ -0.24
CLIP4-201ENST00000320081 IGKV1-39P01597 117 aa13.58□□□□□ -0.24
CLIP4-201ENST00000320081 IGKV1D-39P04432 117 aa13.58□□□□□ -0.24
CLIP4-201ENST00000320081 TEX38Q6PEX7 206 aa13.58□□□□□ -0.24
CLIP4-201ENST00000320081 Q6ZR03 302 aa13.58□□□□□ -0.24
CLIP4-201ENST00000320081 AGMATQ9BSE5 352 aa13.58□□□□□ -0.24
CLIP4-201ENST00000320081 MCRIP2Q9BUT9 160 aaKnown RBP13.58□□□□□ -0.24
CLIP4-201ENST00000320081 NPIPB11E5RHQ5 1161 aa13.57□□□□□ -0.24
CLIP4-201ENST00000320081 TIMM23O14925 209 aa13.57□□□□□ -0.24
CLIP4-201ENST00000320081 DNM1P46Q6ZS02 220 aa13.57□□□□□ -0.24
CLIP4-201ENST00000320081 C19orf35Q6ZS72 473 aa13.57□□□□□ -0.24
CLIP4-201ENST00000320081 MGST2Q99735 147 aa13.57□□□□□ -0.24
CLIP4-201ENST00000320081 SLC25A15Q9Y619 301 aa13.57□□□□□ -0.24
CLIP4-201ENST00000320081 GLMPQ8WWB7 406 aa13.57□□□□□ -0.24
CLIP4-201ENST00000320081 PKD1L2Q7Z442 2459 aa13.57□□□□□ -0.24
CLIP4-201ENST00000320081 PLA2G5P39877 138 aa13.57□□□□□ -0.24
CLIP4-201ENST00000320081 COL5A1-AS1Q5SY13 56 aa13.57□□□□□ -0.24
CLIP4-201ENST00000320081 IGFL4Q6B9Z1 124 aa13.57□□□□□ -0.24
CLIP4-201ENST00000320081 TMEM14EPQ6UXP3 125 aa13.57□□□□□ -0.24
CLIP4-201ENST00000320081 RPUSD1Q9UJJ7 312 aaKnown RBP13.57□□□□□ -0.24
CLIP4-201ENST00000320081 C15orf62A8K5M9 175 aa13.56□□□□□ -0.24
CLIP4-201ENST00000320081 AMBPP02760 352 aa13.56□□□□□ -0.24
CLIP4-201ENST00000320081 TMPRSS3P57727 454 aa13.56□□□□□ -0.24
CLIP4-201ENST00000320081 FXYD7P58549 80 aa13.56□□□□□ -0.24
CLIP4-201ENST00000320081 LINC01551Q86U37 167 aa13.56□□□□□ -0.24
CLIP4-201ENST00000320081 PPP1R27Q86WC6 154 aa13.56□□□□□ -0.24
CLIP4-201ENST00000320081 EXOC3-AS1Q8N2X6 119 aa13.56□□□□□ -0.24
CLIP4-201ENST00000320081 IGFBPL1Q8WX77 278 aa13.56□□□□□ -0.24
CLIP4-201ENST00000320081 A0A087WWC5 75 aa13.56□□□□□ -0.24
CLIP4-201ENST00000320081 M0R381 172 aa13.56□□□□□ -0.24
CLIP4-201ENST00000320081 PAX9P55771 341 aa13.56□□□□□ -0.24
CLIP4-201ENST00000320081 CD69Q07108 199 aa13.56□□□□□ -0.24
CLIP4-201ENST00000320081 TBR1Q16650 682 aa13.56□□□□□ -0.24
CLIP4-201ENST00000320081 MBD3L1Q8WWY6 194 aa13.56□□□□□ -0.24
CLIP4-201ENST00000320081 SPACA3Q8IXA5 215 aa13.56□□□□□ -0.24
CLIP4-201ENST00000320081 Q9H3A6 140 aa13.56□□□□□ -0.24
CLIP4-201ENST00000320081 FBXL7Q9UJT9 491 aa13.56□□□□□ -0.24
CLIP4-201ENST00000320081 SRSF9Q13242 221 aaKnown RBP eCLIP13.56□□□□□ -0.24
CLIP4-201ENST00000320081 CLEC2AQ6UVW9 174 aa13.56□□□□□ -0.24
CLIP4-201ENST00000320081 COLCA1Q6ZS62 124 aa13.56□□□□□ -0.24
CLIP4-201ENST00000320081 HSPB8Q9UJY1 196 aa13.56□□□□□ -0.24
CLIP4-201ENST00000320081 CDH23Q9H251 3354 aa13.55□□□□□ -0.24
CLIP4-201ENST00000320081 CSRP1P21291 193 aaKnown RBP13.55□□□□□ -0.24
CLIP4-201ENST00000320081 CLEC19AQ6UXS0 136 aa13.55□□□□□ -0.24
CLIP4-201ENST00000320081 PLSCR4Q9NRQ2 329 aa13.55□□□□□ -0.24
CLIP4-201ENST00000320081 PCP4P48539 62 aa13.55□□□□□ -0.24
CLIP4-201ENST00000320081 TAS2R60P59551 318 aa13.55□□□□□ -0.24
CLIP4-201ENST00000320081 DGAT2L7PQ6IED9 249 aa13.55□□□□□ -0.24
CLIP4-201ENST00000320081 TMEM136Q6ZRR5 245 aa13.55□□□□□ -0.24
CLIP4-201ENST00000320081 AP5S1Q9NUS5 200 aa13.55□□□□□ -0.24
CLIP4-201ENST00000320081 C7orf71A4D174 169 aa13.55□□□□□ -0.24
CLIP4-201ENST00000320081 H7C2G1 150 aa13.55□□□□□ -0.24
CLIP4-201ENST00000320081 GCSHP23434 173 aa13.55□□□□□ -0.24
CLIP4-201ENST00000320081 FAM90A2PQ658T7 463 aa13.55□□□□□ -0.24
CLIP4-201ENST00000320081 TMEM200BQ69YZ2 307 aa13.55□□□□□ -0.24
CLIP4-201ENST00000320081 LCN12Q6JVE5 192 aa13.55□□□□□ -0.24
CLIP4-201ENST00000320081 HIST3H2BBQ8N257 126 aa13.55□□□□□ -0.24
CLIP4-201ENST00000320081 CA7P43166 264 aa13.54□□□□□ -0.24
CLIP4-201ENST00000320081 FOXL2NBQ6ZUU3 175 aa13.54□□□□□ -0.24
CLIP4-201ENST00000320081 MTORP42345 2549 aa13.54□□□□□ -0.24
CLIP4-201ENST00000320081 C2orf16Q68DN1 1984 aa13.54□□□□□ -0.24
CLIP4-201ENST00000320081 ETV2O00321 342 aaPredicted RBP13.54□□□□□ -0.24
CLIP4-201ENST00000320081 NRN1Q9NPD7 142 aa13.54□□□□□ -0.24
CLIP4-201ENST00000320081 HBBP68871 147 aa13.54□□□□□ -0.24
CLIP4-201ENST00000320081 CX3CL1P78423 397 aa13.54□□□□□ -0.24
CLIP4-201ENST00000320081 SRSF4Q08170 494 aaKnown RBP13.54□□□□□ -0.24
CLIP4-201ENST00000320081 C21orf62Q9NYP8 219 aa13.54□□□□□ -0.24
CLIP4-201ENST00000320081 MMP23AO75900 390 aa13.53□□□□□ -0.24
CLIP4-201ENST00000320081 SRD5A1P18405 259 aa13.53□□□□□ -0.24
CLIP4-201ENST00000320081 WT1P19544 449 aaPredicted RBP13.53□□□□□ -0.24
CLIP4-201ENST00000320081 CDPF1Q6NVV7 123 aa13.53□□□□□ -0.24
CLIP4-201ENST00000320081 METTL26Q96S19 204 aa13.53□□□□□ -0.24
CLIP4-201ENST00000320081 TMEM133Q9H2Q1 129 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms