RNA–Protein interactions for RNA: ENST00000318266.9

PTPRA-202, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRA, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-202ENST00000318266 DEFB125Q8N687 156 aa7.86□□□□□ -1.15
PTPRA-202ENST00000318266 CT45A3Q8NHU0 189 aa7.86□□□□□ -1.15
PTPRA-202ENST00000318266 MBD6Q96DN6 1003 aa7.86□□□□□ -1.15
PTPRA-202ENST00000318266 GRAMD2BQ96HH9 432 aa7.86□□□□□ -1.15
PTPRA-202ENST00000318266 ABI3Q9P2A4 366 aa7.86□□□□□ -1.15
PTPRA-202ENST00000318266 JPT1Q9UK76 154 aa7.86□□□□□ -1.15
PTPRA-202ENST00000318266 PCSK5Q92824 1860 aa7.86□□□□□ -1.15
PTPRA-202ENST00000318266 FAM90A9PA6NNJ1 464 aa7.85□□□□□ -1.15
PTPRA-202ENST00000318266 BPIFB3P59826 476 aa7.85□□□□□ -1.15
PTPRA-202ENST00000318266 RHOGP84095 191 aa7.85□□□□□ -1.15
PTPRA-202ENST00000318266 SPRNQ5BIV9 151 aa7.85□□□□□ -1.15
PTPRA-202ENST00000318266 C6orf15Q6UXA7 325 aaPredicted RBP7.85□□□□□ -1.15
PTPRA-202ENST00000318266 FAM90A1Q86YD7 464 aa7.85□□□□□ -1.15
PTPRA-202ENST00000318266 DEFB108BQ8NET1 73 aa7.85□□□□□ -1.15
PTPRA-202ENST00000318266 FNDC4Q9H6D8 234 aaPredicted RBP7.85□□□□□ -1.15
PTPRA-202ENST00000318266 ST20Q9HBF5 79 aa7.85□□□□□ -1.15
PTPRA-202ENST00000318266 SRRM4A7MD48 611 aaKnown RBP7.85□□□□□ -1.15
PTPRA-202ENST00000318266 COX7A2P2O60397 106 aa7.85□□□□□ -1.15
PTPRA-202ENST00000318266 LINC00322Q6ZN03 302 aaPredicted RBP7.85□□□□□ -1.15
PTPRA-202ENST00000318266 FAM167A-AS1Q96KT0 104 aa7.85□□□□□ -1.15
PTPRA-202ENST00000318266 PAXXQ9BUH6 204 aa7.85□□□□□ -1.15
PTPRA-202ENST00000318266 CALYQ9NYX4 217 aa7.85□□□□□ -1.15
PTPRA-202ENST00000318266 FOXA2Q9Y261 457 aaPredicted RBP7.85□□□□□ -1.15
PTPRA-202ENST00000318266 CNOT1A5YKK6 2376 aaKnown RBP7.85□□□□□ -1.15
PTPRA-202ENST00000318266 SLC25A5P05141 298 aaKnown RBP7.84□□□□□ -1.15
PTPRA-202ENST00000318266 KLF5Q13887 457 aaPredicted RBP7.84□□□□□ -1.15
PTPRA-202ENST00000318266 TMEM116Q8NCL8 245 aa7.84□□□□□ -1.15
PTPRA-202ENST00000318266 DDB2Q92466 427 aa7.84□□□□□ -1.15
PTPRA-202ENST00000318266 TMEM191AQ9H0A3 160 aa7.84□□□□□ -1.15
PTPRA-202ENST00000318266 CSTL1Q9H114 145 aa7.84□□□□□ -1.15
PTPRA-202ENST00000318266 NTN3O00634 580 aaPredicted RBP7.84□□□□□ -1.15
PTPRA-202ENST00000318266 HBBP68871 147 aa7.84□□□□□ -1.15
PTPRA-202ENST00000318266 C12orf54Q6X4T0 127 aa7.84□□□□□ -1.15
PTPRA-202ENST00000318266 ZNF329Q86UD4 541 aa7.84□□□□□ -1.15
PTPRA-202ENST00000318266 TEX45Q8NA69 505 aa7.84□□□□□ -1.15
PTPRA-202ENST00000318266 PRR7Q8TB68 274 aa7.84□□□□□ -1.15
PTPRA-202ENST00000318266 WIPF2Q8TF74 440 aaPredicted RBP7.84□□□□□ -1.15
PTPRA-202ENST00000318266 RIF1Q5UIP0 2472 aaKnown RBP7.84□□□□□ -1.15
PTPRA-202ENST00000318266 C7orf71A4D174 169 aa7.84□□□□□ -1.16
PTPRA-202ENST00000318266 K7ERU9 68 aa7.84□□□□□ -1.16
PTPRA-202ENST00000318266 HIST1H1EP10412 219 aaKnown RBP7.84□□□□□ -1.16
PTPRA-202ENST00000318266 HOXC12P31275 282 aa7.84□□□□□ -1.16
PTPRA-202ENST00000318266 PIP4P1Q86T03 277 aa7.84□□□□□ -1.16
PTPRA-202ENST00000318266 ASCL2Q99929 193 aa7.84□□□□□ -1.16
PTPRA-202ENST00000318266 SPRR3Q9UBC9 169 aa7.84□□□□□ -1.16
PTPRA-202ENST00000318266 KLK10O43240 276 aa7.83□□□□□ -1.16
PTPRA-202ENST00000318266 ORM2P19652 201 aa7.83□□□□□ -1.16
PTPRA-202ENST00000318266 REG1BP48304 166 aa7.83□□□□□ -1.16
PTPRA-202ENST00000318266 RNFT1Q5M7Z0 435 aa7.83□□□□□ -1.16
PTPRA-202ENST00000318266 NPIPB3Q92617 1050 aa7.83□□□□□ -1.16
PTPRA-202ENST00000318266 CHRDL1Q9BU40 450 aa7.83□□□□□ -1.16
PTPRA-202ENST00000318266 HILPDAQ9Y5L2 63 aa7.83□□□□□ -1.16
PTPRA-202ENST00000318266 TPRP12270 2363 aaKnown RBP7.83□□□□□ -1.16
PTPRA-202ENST00000318266 TEX50A0A1B0GTY4 177 aa7.83□□□□□ -1.16
PTPRA-202ENST00000318266 APELAP0DMC3 54 aa7.83□□□□□ -1.16
PTPRA-202ENST00000318266 TMEM177Q53S58 311 aa7.83□□□□□ -1.16
PTPRA-202ENST00000318266 C10orf55Q5SWW7 151 aa7.83□□□□□ -1.16
PTPRA-202ENST00000318266 C10orf113Q5VZT2 155 aa7.83□□□□□ -1.16
PTPRA-202ENST00000318266 GTSF1Q8WW33 167 aa7.83□□□□□ -1.16
PTPRA-202ENST00000318266 SPTBN2O15020 2390 aa7.83□□□□□ -1.16
PTPRA-202ENST00000318266 ZFHX2Q9C0A1 2572 aaPredicted RBP7.83□□□□□ -1.16
PTPRA-202ENST00000318266 CEP250Q9BV73 2442 aa7.83□□□□□ -1.16
PTPRA-202ENST00000318266 IGHV3-21A0A0B4J1V1 117 aa7.82□□□□□ -1.16
PTPRA-202ENST00000318266 PGPA6NDG6 321 aa7.82□□□□□ -1.16
PTPRA-202ENST00000318266 GAGE10A6NGK3 116 aa7.82□□□□□ -1.16
PTPRA-202ENST00000318266 CHEK1O14757 476 aa7.82□□□□□ -1.16
PTPRA-202ENST00000318266 MGST3O14880 152 aa7.82□□□□□ -1.16
PTPRA-202ENST00000318266 OR2J3O76001 311 aa7.82□□□□□ -1.16
PTPRA-202ENST00000318266 ZNF883P0CG24 379 aa7.82□□□□□ -1.16
PTPRA-202ENST00000318266 ARF6P62330 175 aa7.82□□□□□ -1.16
PTPRA-202ENST00000318266 PRCDQ00LT1 54 aa7.82□□□□□ -1.16
PTPRA-202ENST00000318266 Q71RC1 249 aaPredicted RBP7.82□□□□□ -1.16
PTPRA-202ENST00000318266 MOGAT3Q86VF5 341 aa7.82□□□□□ -1.16
PTPRA-202ENST00000318266 RAB37Q96AX2 223 aa7.82□□□□□ -1.16
PTPRA-202ENST00000318266 MAP1LC3CQ9BXW4 147 aa7.82□□□□□ -1.16
PTPRA-202ENST00000318266 PILRBQ9UKJ0 227 aa7.82□□□□□ -1.16
PTPRA-202ENST00000318266 SPENQ96T58 3664 aaKnown RBP7.82□□□□□ -1.16
PTPRA-202ENST00000318266 TRAV8-1A0A0A6YYK1 113 aa7.82□□□□□ -1.16
PTPRA-202ENST00000318266 FAM231BA6NCW3 169 aa7.82□□□□□ -1.16
PTPRA-202ENST00000318266 E7EUB6 86 aa7.82□□□□□ -1.16
PTPRA-202ENST00000318266 MOSP00540 346 aa7.82□□□□□ -1.16
PTPRA-202ENST00000318266 CECR9P0C854 216 aa7.82□□□□□ -1.16
PTPRA-202ENST00000318266 GPR183P32249 361 aa7.82□□□□□ -1.16
PTPRA-202ENST00000318266 TMUB1Q9BVT8 246 aa7.82□□□□□ -1.16
PTPRA-202ENST00000318266 TPPP3Q9BW30 176 aa7.82□□□□□ -1.16
PTPRA-202ENST00000318266 SCRT2Q9NQ03 307 aa7.82□□□□□ -1.16
PTPRA-202ENST00000318266 PRNDQ9UKY0 176 aa7.82□□□□□ -1.16
PTPRA-202ENST00000318266 TANC2Q9HCD6 1990 aa7.82□□□□□ -1.16
PTPRA-202ENST00000318266 P01737 135 aa7.82□□□□□ -1.16
PTPRA-202ENST00000318266 SAA1P0DJI8 122 aaPredicted RBP7.82□□□□□ -1.16
PTPRA-202ENST00000318266 RNASE2P10153 161 aaKnown RBP7.82□□□□□ -1.16
PTPRA-202ENST00000318266 KIR2DS2P43631 304 aa7.82□□□□□ -1.16
PTPRA-202ENST00000318266 CD69Q07108 199 aa7.82□□□□□ -1.16
PTPRA-202ENST00000318266 ATP1A1-AS1Q5TC04 95 aa7.82□□□□□ -1.16
PTPRA-202ENST00000318266 RASL11AQ6T310 242 aa7.82□□□□□ -1.16
PTPRA-202ENST00000318266 GCSAMQ8N6F7 178 aa7.82□□□□□ -1.16
PTPRA-202ENST00000318266 RBMXL3Q8N7X1 1067 aaKnown RBP7.82□□□□□ -1.16
PTPRA-202ENST00000318266 PLCE1Q9P212 2302 aa7.82□□□□□ -1.16
PTPRA-202ENST00000318266 TRGV5A0A0B4J1U4 118 aa7.81□□□□□ -1.16
PTPRA-202ENST00000318266 A0A1B0GXF2 115 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms