RNA–Protein interactions for RNA: ENST00000317677.9

CPNE1-201, Transcript of copine 1, humanhuman

TSL 1 (best) BASIC

Gene CPNE1, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-201ENST00000317677 MT-ND6P03923 174 aa10.61□□□□□ -0.71
CPNE1-201ENST00000317677 CCL3L1P16619 93 aa10.61□□□□□ -0.71
CPNE1-201ENST00000317677 CBLN1P23435 193 aa10.61□□□□□ -0.71
CPNE1-201ENST00000317677 G6PCP35575 357 aa10.61□□□□□ -0.71
CPNE1-201ENST00000317677 GPR12P47775 334 aa10.61□□□□□ -0.71
CPNE1-201ENST00000317677 ARL16Q0P5N6 197 aa10.61□□□□□ -0.71
CPNE1-201ENST00000317677 TMEM267Q0VDI3 215 aaPredicted RBP10.61□□□□□ -0.71
CPNE1-201ENST00000317677 CATR1Q13166 79 aa10.61□□□□□ -0.71
CPNE1-201ENST00000317677 C11orf71Q6IPW1 123 aa10.61□□□□□ -0.71
CPNE1-201ENST00000317677 OR4C12Q96R67 309 aa10.61□□□□□ -0.71
CPNE1-201ENST00000317677 GNB4Q9HAV0 340 aa10.61□□□□□ -0.71
CPNE1-201ENST00000317677 ZNRD1Q9P1U0 126 aa10.61□□□□□ -0.71
CPNE1-201ENST00000317677 MDFIC2A0A1B0GVS7 189 aa10.61□□□□□ -0.71
CPNE1-201ENST00000317677 H0YJW9 148 aa10.61□□□□□ -0.71
CPNE1-201ENST00000317677 C19orf84I3L1E1 186 aa10.61□□□□□ -0.71
CPNE1-201ENST00000317677 PAGE4O60829 102 aa10.61□□□□□ -0.71
CPNE1-201ENST00000317677 ZNF324O75467 553 aaPredicted RBP10.61□□□□□ -0.71
CPNE1-201ENST00000317677 AMTP48728 403 aa10.61□□□□□ -0.71
CPNE1-201ENST00000317677 CDC34P49427 236 aaPredicted RBP10.61□□□□□ -0.71
CPNE1-201ENST00000317677 TMEM200BQ69YZ2 307 aa10.61□□□□□ -0.71
CPNE1-201ENST00000317677 HIST2H2BCQ6DN03 193 aa10.61□□□□□ -0.71
CPNE1-201ENST00000317677 HAPLN4Q86UW8 402 aa10.61□□□□□ -0.71
CPNE1-201ENST00000317677 OR10G8Q8NGN5 311 aa10.61□□□□□ -0.71
CPNE1-201ENST00000317677 HSD17B10Q99714 261 aaKnown RBP10.61□□□□□ -0.71
CPNE1-201ENST00000317677 LINC00312Q9Y6C7 94 aa10.61□□□□□ -0.71
CPNE1-201ENST00000317677 C11orf94C9JXX5 98 aa10.6□□□□□ -0.71
CPNE1-201ENST00000317677 FCN1O00602 326 aa10.6□□□□□ -0.71
CPNE1-201ENST00000317677 LGALS7P47929 136 aa10.6□□□□□ -0.71
CPNE1-201ENST00000317677 LGALS4P56470 323 aa10.6□□□□□ -0.71
CPNE1-201ENST00000317677 DDB2Q92466 427 aa10.6□□□□□ -0.71
CPNE1-201ENST00000317677 CLUHP3Q96NS8 147 aa10.6□□□□□ -0.71
CPNE1-201ENST00000317677 FAM103A1Q9BTL3 118 aaKnown RBP10.6□□□□□ -0.71
CPNE1-201ENST00000317677 KCNIP2Q9NS61 270 aa10.6□□□□□ -0.71
CPNE1-201ENST00000317677 KAAG1Q9UBP8 84 aa10.6□□□□□ -0.71
CPNE1-201ENST00000317677 RPUSD1Q9UJJ7 312 aaKnown RBP10.6□□□□□ -0.71
CPNE1-201ENST00000317677 hADV38S2A0JD32 116 aa10.59□□□□□ -0.71
CPNE1-201ENST00000317677 F2Z2F3 143 aa10.59□□□□□ -0.71
CPNE1-201ENST00000317677 M0R1X1 148 aa10.59□□□□□ -0.71
CPNE1-201ENST00000317677 SYNGR2O43760 224 aa10.59□□□□□ -0.71
CPNE1-201ENST00000317677 LY6HO94772 140 aa10.59□□□□□ -0.71
CPNE1-201ENST00000317677 SAA2P0DJI9 122 aaPredicted RBP10.59□□□□□ -0.71
CPNE1-201ENST00000317677 PPOXP50336 477 aa10.59□□□□□ -0.71
CPNE1-201ENST00000317677 GNB1P62873 340 aa10.59□□□□□ -0.71
CPNE1-201ENST00000317677 RPL31P62899 125 aaKnown RBP10.59□□□□□ -0.71
CPNE1-201ENST00000317677 ZNF90Q03938 601 aa10.59□□□□□ -0.71
CPNE1-201ENST00000317677 MEF2CQ06413 473 aaPredicted RBP10.59□□□□□ -0.71
CPNE1-201ENST00000317677 AMMECR1LQ6DCA0 310 aa10.59□□□□□ -0.71
CPNE1-201ENST00000317677 FAM216AQ8WUB2 273 aa10.59□□□□□ -0.71
CPNE1-201ENST00000317677 PSENENQ9NZ42 101 aa10.59□□□□□ -0.71
CPNE1-201ENST00000317677 RBFOX2O43251 390 aaKnown RBP eCLIP10.59□□□□□ -0.717e-7■□□□□ 10.1
CPNE1-201ENST00000317677 CD5LO43866 347 aa10.59□□□□□ -0.71
CPNE1-201ENST00000317677 CA2P00918 260 aa10.59□□□□□ -0.71
CPNE1-201ENST00000317677 COL8A1P27658 744 aa10.59□□□□□ -0.71
CPNE1-201ENST00000317677 DLX6P56179 175 aa10.59□□□□□ -0.71
CPNE1-201ENST00000317677 WDR73Q6P4I2 378 aa10.59□□□□□ -0.71
CPNE1-201ENST00000317677 OR10P1Q8NGE3 313 aa10.59□□□□□ -0.71
CPNE1-201ENST00000317677 OR10G9Q8NGN4 311 aa10.59□□□□□ -0.71
CPNE1-201ENST00000317677 OR10G7Q8NGN6 311 aa10.59□□□□□ -0.71
CPNE1-201ENST00000317677 GATAD1Q8WUU5 269 aa10.59□□□□□ -0.71
CPNE1-201ENST00000317677 H3BP45 60 aa10.58□□□□□ -0.72
CPNE1-201ENST00000317677 NDUFB3O43676 98 aa10.58□□□□□ -0.72
CPNE1-201ENST00000317677 FCGR3BO75015 233 aa10.58□□□□□ -0.72
CPNE1-201ENST00000317677 IGLC1P0CG04 106 aa10.58□□□□□ -0.72
CPNE1-201ENST00000317677 IAPPP10997 89 aa10.58□□□□□ -0.72
CPNE1-201ENST00000317677 ACSM6Q6P461 480 aa10.58□□□□□ -0.72
CPNE1-201ENST00000317677 C12orf54Q6X4T0 127 aa10.58□□□□□ -0.72
CPNE1-201ENST00000317677 ITPR2Q14571 2701 aa10.58□□□□□ -0.72
CPNE1-201ENST00000317677 OR7C2O60412 319 aa10.57□□□□□ -0.72
CPNE1-201ENST00000317677 RIPPLY3P57055 190 aa10.57□□□□□ -0.72
CPNE1-201ENST00000317677 SLC25A48Q6ZT89 311 aaKnown RBP10.57□□□□□ -0.72
CPNE1-201ENST00000317677 FER1L6-AS1Q8NA97 138 aa10.57□□□□□ -0.72
CPNE1-201ENST00000317677 H1FXQ92522 213 aaKnown RBP10.57□□□□□ -0.72
CPNE1-201ENST00000317677 BORCS7Q96B45 105 aa10.57□□□□□ -0.72
CPNE1-201ENST00000317677 TMEM186Q96B77 213 aa10.57□□□□□ -0.72
CPNE1-201ENST00000317677 WNT10AQ9GZT5 417 aa10.57□□□□□ -0.72
CPNE1-201ENST00000317677 LY96Q9Y6Y9 160 aa10.57□□□□□ -0.72
CPNE1-201ENST00000317677 TET2Q6N021 2002 aaPredicted RBP10.57□□□□□ -0.72
CPNE1-201ENST00000317677 RAB29O14966 203 aa10.57□□□□□ -0.72
CPNE1-201ENST00000317677 OR9G9P0C7N8 305 aa10.57□□□□□ -0.72
CPNE1-201ENST00000317677 BVES-AS1Q5T3Y7 98 aa10.57□□□□□ -0.72
CPNE1-201ENST00000317677 ZNF841Q6ZN19 808 aa10.57□□□□□ -0.72
CPNE1-201ENST00000317677 ZNF714Q96N38 554 aa10.57□□□□□ -0.72
CPNE1-201ENST00000317677 CLEC7AQ9BXN2 247 aa10.57□□□□□ -0.72
CPNE1-201ENST00000317677 QTRT1Q9BXR0 403 aaKnown RBP10.57□□□□□ -0.72
CPNE1-201ENST00000317677 ST20Q9HBF5 79 aa10.57□□□□□ -0.72
CPNE1-201ENST00000317677 RAB9BQ9NP90 201 aa10.57□□□□□ -0.72
CPNE1-201ENST00000317677 OR2T8A6NH00 312 aa10.56□□□□□ -0.72
CPNE1-201ENST00000317677 NDUFB4O95168 129 aa10.56□□□□□ -0.72
CPNE1-201ENST00000317677 IGLL1P15814 213 aa10.56□□□□□ -0.72
CPNE1-201ENST00000317677 CEACAM3P40198 252 aa10.56□□□□□ -0.72
CPNE1-201ENST00000317677 PSG9Q00887 426 aa10.56□□□□□ -0.72
CPNE1-201ENST00000317677 CFAP161Q6P656 301 aa10.56□□□□□ -0.72
CPNE1-201ENST00000317677 ZNF114Q8NC26 417 aa10.56□□□□□ -0.72
CPNE1-201ENST00000317677 SLC25A22Q9H936 323 aa10.56□□□□□ -0.72
CPNE1-201ENST00000317677 PEF1Q9UBV8 284 aaKnown RBP10.56□□□□□ -0.72
CPNE1-201ENST00000317677 TEX15Q9BXT5 2789 aa10.56□□□□□ -0.72
CPNE1-201ENST00000317677 DOCK11Q5JSL3 2073 aa10.56□□□□□ -0.72
CPNE1-201ENST00000317677 SNURFLB1AK76 121 aa10.56□□□□□ -0.72
CPNE1-201ENST00000317677 LINC00869P0C866 280 aa10.56□□□□□ -0.72
CPNE1-201ENST00000317677 REG1BP48304 166 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms