RNA–Protein interactions for RNA: ENST00000315286.12

CCDC43-201, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC43, Length 2,082 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-201ENST00000315286 C16orf82Q7Z2V1 217 aa14.56□□□□□ -0.08
CCDC43-201ENST00000315286 IGHV4-61A0A0C4DH41 118 aa14.56□□□□□ -0.08
CCDC43-201ENST00000315286 OR5T1Q8NG75 326 aa14.56□□□□□ -0.08
CCDC43-201ENST00000315286 PIMREGQ9BSJ6 248 aa14.56□□□□□ -0.08
CCDC43-201ENST00000315286 ZNF355PQ9NSJ1 428 aa14.56□□□□□ -0.08
CCDC43-201ENST00000315286 AURKAIP1Q9NWT8 199 aaPredicted RBP14.56□□□□□ -0.08
CCDC43-201ENST00000315286 PRELID1Q9Y255 219 aa14.56□□□□□ -0.08
CCDC43-201ENST00000315286 TRBV20OR9-2A0A075B6H5 130 aa14.55□□□□□ -0.08
CCDC43-201ENST00000315286 TMEM11P17152 192 aa14.55□□□□□ -0.08
CCDC43-201ENST00000315286 SAA4P35542 130 aa14.55□□□□□ -0.08
CCDC43-201ENST00000315286 BPIFB3P59826 476 aa14.55□□□□□ -0.08
CCDC43-201ENST00000315286 CX3CL1P78423 397 aa14.55□□□□□ -0.08
CCDC43-201ENST00000315286 FAM120AOSQ5T036 256 aa14.55□□□□□ -0.08
CCDC43-201ENST00000315286 ZNF562Q6V9R5 426 aa14.55□□□□□ -0.08
CCDC43-201ENST00000315286 LINC01551Q86U37 167 aa14.55□□□□□ -0.08
CCDC43-201ENST00000315286 ZNF843Q8N446 348 aa14.55□□□□□ -0.08
CCDC43-201ENST00000315286 C10orf105Q8TEF2 133 aa14.55□□□□□ -0.08
CCDC43-201ENST00000315286 SAV1Q9H4B6 383 aaPredicted RBP14.55□□□□□ -0.08
CCDC43-201ENST00000315286 POLR3KQ9Y2Y1 108 aaPredicted RBP14.55□□□□□ -0.08
CCDC43-201ENST00000315286 ARL2-SNX15V9GYD0 113 aa14.55□□□□□ -0.08
CCDC43-201ENST00000315286 PGPEP1LA6NFU8 196 aa14.54□□□□□ -0.08
CCDC43-201ENST00000315286 RPS10P46783 165 aaKnown RBP14.54□□□□□ -0.08
CCDC43-201ENST00000315286 ATP5J2P56134 94 aa14.54□□□□□ -0.08
CCDC43-201ENST00000315286 OR5AU1Q8NGC0 362 aa14.54□□□□□ -0.08
CCDC43-201ENST00000315286 EPG5Q9HCE0 2579 aa14.54□□□□□ -0.08
CCDC43-201ENST00000315286 ORM2P19652 201 aa14.54□□□□□ -0.08
CCDC43-201ENST00000315286 VWC2LB2RUY7 222 aa14.53□□□□□ -0.08
CCDC43-201ENST00000315286 NDPQ00604 133 aa14.53□□□□□ -0.08
CCDC43-201ENST00000315286 LINC00305Q7Z4B0 112 aa14.53□□□□□ -0.08
CCDC43-201ENST00000315286 PIP4P2Q8N4L2 257 aa14.53□□□□□ -0.08
CCDC43-201ENST00000315286 OR1B1Q8NGR6 318 aa14.53□□□□□ -0.08
CCDC43-201ENST00000315286 C11orf52Q96A22 123 aa14.53□□□□□ -0.08
CCDC43-201ENST00000315286 MAP1AP78559 2803 aaPredicted RBP14.53□□□□□ -0.08
CCDC43-201ENST00000315286 ELOA3CA0A087WX78 387 aaPredicted RBP14.53□□□□□ -0.08
CCDC43-201ENST00000315286 K7EIM0 57 aa14.53□□□□□ -0.08
CCDC43-201ENST00000315286 FAM106CPP0CH98 169 aa14.53□□□□□ -0.08
CCDC43-201ENST00000315286 PYYP10082 97 aa14.53□□□□□ -0.08
CCDC43-201ENST00000315286 KLF17Q5JT82 389 aaPredicted RBP14.53□□□□□ -0.08
CCDC43-201ENST00000315286 ASPHD1Q5U4P2 390 aa14.53□□□□□ -0.08
CCDC43-201ENST00000315286 ARPC1AQ92747 370 aa14.53□□□□□ -0.08
CCDC43-201ENST00000315286 BIN3Q9NQY0 253 aa14.53□□□□□ -0.08
CCDC43-201ENST00000315286 FAM208BQ5VWN6 2430 aa14.53□□□□□ -0.08
CCDC43-201ENST00000315286 CENPVL3A0A0U1RRI6 287 aa14.52□□□□□ -0.09
CCDC43-201ENST00000315286 GGTLC3B5MD39 225 aa14.52□□□□□ -0.09
CCDC43-201ENST00000315286 H7BYZ3 331 aa14.52□□□□□ -0.09
CCDC43-201ENST00000315286 IGLC1P0CG04 106 aa14.52□□□□□ -0.09
CCDC43-201ENST00000315286 UBE2L3P68036 154 aaKnown RBP14.52□□□□□ -0.09
CCDC43-201ENST00000315286 PAX8Q06710 450 aa14.52□□□□□ -0.09
CCDC43-201ENST00000315286 CLEC2AQ6UVW9 174 aa14.52□□□□□ -0.09
CCDC43-201ENST00000315286 C1QL4Q86Z23 238 aa14.52□□□□□ -0.09
CCDC43-201ENST00000315286 NDUFS8O00217 210 aa14.51□□□□□ -0.09
CCDC43-201ENST00000315286 NPFFO15130 113 aa14.51□□□□□ -0.09
CCDC43-201ENST00000315286 NECAP1Q8NC96 275 aa14.51□□□□□ -0.09
CCDC43-201ENST00000315286 ANAPC16Q96DE5 110 aa14.51□□□□□ -0.09
CCDC43-201ENST00000315286 PAXXQ9BUH6 204 aa14.51□□□□□ -0.09
CCDC43-201ENST00000315286 IGHV4-30-2A0A087WSY4 118 aa14.51□□□□□ -0.09
CCDC43-201ENST00000315286 A0A1W2PRE2 83 aa14.51□□□□□ -0.09
CCDC43-201ENST00000315286 PFN1P07737 140 aaKnown RBP14.51□□□□□ -0.09
CCDC43-201ENST00000315286 CRYBB3P26998 211 aa14.51□□□□□ -0.09
CCDC43-201ENST00000315286 SUMO1P63165 101 aaKnown RBP14.51□□□□□ -0.09
CCDC43-201ENST00000315286 Q8N9W7 124 aa14.51□□□□□ -0.09
CCDC43-201ENST00000315286 OR1L6Q8NGR2 347 aa14.51□□□□□ -0.09
CCDC43-201ENST00000315286 OCC1Q8TAD7 63 aa14.51□□□□□ -0.09
CCDC43-201ENST00000315286 NRGNQ92686 78 aa14.51□□□□□ -0.09
CCDC43-201ENST00000315286 FAM210BQ96KR6 192 aa14.51□□□□□ -0.09
CCDC43-201ENST00000315286 OR51M1Q9H341 326 aa14.51□□□□□ -0.09
CCDC43-201ENST00000315286 LRRK2Q5S007 2527 aa14.5□□□□□ -0.09
CCDC43-201ENST00000315286 HYPMO75409 117 aa14.5□□□□□ -0.09
CCDC43-201ENST00000315286 BRS3P32247 399 aa14.5□□□□□ -0.09
CCDC43-201ENST00000315286 SRSF1Q07955 248 aaKnown RBP eCLIP14.5□□□□□ -0.09
CCDC43-201ENST00000315286 TIGITQ495A1 244 aa14.5□□□□□ -0.09
CCDC43-201ENST00000315286 PERPQ96FX8 193 aa14.5□□□□□ -0.09
CCDC43-201ENST00000315286 CELSR2Q9HCU4 2923 aa14.5□□□□□ -0.09
CCDC43-201ENST00000315286 TRBV24-1A0A075B6N3 115 aa14.5□□□□□ -0.09
CCDC43-201ENST00000315286 NPIPB5A8MRT5 1133 aa14.5□□□□□ -0.09
CCDC43-201ENST00000315286 TSPAN9O75954 239 aa14.5□□□□□ -0.09
CCDC43-201ENST00000315286 PSG1P11464 419 aa14.5□□□□□ -0.09
CCDC43-201ENST00000315286 RPL35P42766 123 aaKnown RBP14.5□□□□□ -0.09
CCDC43-201ENST00000315286 GALR1P47211 349 aa14.5□□□□□ -0.09
CCDC43-201ENST00000315286 FANCD2OSQ96PS1 177 aa14.5□□□□□ -0.09
CCDC43-201ENST00000315286 ELOVL1Q9BW60 279 aa14.5□□□□□ -0.09
CCDC43-201ENST00000315286 UBR5O95071 2799 aaPredicted RBP14.49□□□□□ -0.09
CCDC43-201ENST00000315286 IGHV7-81A0A0B4J1V7 117 aa14.49□□□□□ -0.09
CCDC43-201ENST00000315286 IGKV1-17P01599 117 aa14.49□□□□□ -0.09
CCDC43-201ENST00000315286 HNF1AP20823 631 aa14.49□□□□□ -0.09
CCDC43-201ENST00000315286 PLP1P60201 277 aa14.49□□□□□ -0.09
CCDC43-201ENST00000315286 FXYD5Q96DB9 178 aa14.49□□□□□ -0.09
CCDC43-201ENST00000315286 RBM14Q96PK6 669 aaKnown RBP14.49□□□□□ -0.09
CCDC43-201ENST00000315286 C1RLQ9NZP8 487 aa14.49□□□□□ -0.09
CCDC43-201ENST00000315286 CELSR1Q9NYQ6 3014 aa14.49□□□□□ -0.09
CCDC43-201ENST00000315286 IGHV3OR16-10A0A075B7F0 116 aa14.48□□□□□ -0.09
CCDC43-201ENST00000315286 SNRPCP09234 159 aaKnown RBP14.48□□□□□ -0.09
CCDC43-201ENST00000315286 EGR2P11161 476 aaPredicted RBP14.48□□□□□ -0.09
CCDC43-201ENST00000315286 SNRPEP62304 92 aaKnown RBP14.48□□□□□ -0.09
CCDC43-201ENST00000315286 TTC9CQ8N5M4 171 aa14.48□□□□□ -0.09
CCDC43-201ENST00000315286 OR5B12Q96R08 314 aa14.48□□□□□ -0.09
CCDC43-201ENST00000315286 RASL11BQ9BPW5 248 aa14.48□□□□□ -0.09
CCDC43-201ENST00000315286 IGLV11-55A0A075B6I3 123 aa14.48□□□□□ -0.09
CCDC43-201ENST00000315286 S4R3C0 116 aa14.48□□□□□ -0.09
CCDC43-201ENST00000315286 HELTA6NFD8 242 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms