RNA–Protein interactions for RNA: ENST00000312438.7

CLCF1-201, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCF1, Length 1,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-201ENST00000312438 C8orf88P0DMB2 117 aa13.17□□□□□ -0.3
CLCF1-201ENST00000312438 C10orf113Q5VZT2 155 aa13.17□□□□□ -0.3
CLCF1-201ENST00000312438 UNQ5815/PRO19632Q6UWF5 114 aa13.17□□□□□ -0.3
CLCF1-201ENST00000312438 PQLC2Q6ZP29 291 aa13.17□□□□□ -0.3
CLCF1-201ENST00000312438 TMUB1Q9BVT8 246 aa13.17□□□□□ -0.3
CLCF1-201ENST00000312438 PUS1Q9Y606 427 aaKnown RBP eCLIP13.17□□□□□ -0.3
CLCF1-201ENST00000312438 H3BUX3 64 aa13.16□□□□□ -0.3
CLCF1-201ENST00000312438 ATP6V0E1O15342 81 aa13.16□□□□□ -0.3
CLCF1-201ENST00000312438 FABP1P07148 127 aa13.16□□□□□ -0.3
CLCF1-201ENST00000312438 HIST1H1BP16401 226 aaKnown RBP13.16□□□□□ -0.3
CLCF1-201ENST00000312438 AKIRIN2Q53H80 203 aa13.16□□□□□ -0.3
CLCF1-201ENST00000312438 FAM90A2PQ658T7 463 aa13.16□□□□□ -0.3
CLCF1-201ENST00000312438 PATE2Q6UY27 113 aa13.16□□□□□ -0.3
CLCF1-201ENST00000312438 KRTAP1-3Q8IUG1 177 aa13.16□□□□□ -0.3
CLCF1-201ENST00000312438 OR4F5Q8NH21 305 aa13.16□□□□□ -0.3
CLCF1-201ENST00000312438 FAM110DQ8TAY7 271 aaPredicted RBP13.16□□□□□ -0.3
CLCF1-201ENST00000312438 OR4F4Q96R69 305 aa13.16□□□□□ -0.3
CLCF1-201ENST00000312438 NIPSNAP3BQ9BS92 247 aa13.16□□□□□ -0.3
CLCF1-201ENST00000312438 PITPNC1Q9UKF7 332 aa13.16□□□□□ -0.3
CLCF1-201ENST00000312438 CRYBG3Q68DQ2 2970 aa13.16□□□□□ -0.3
CLCF1-201ENST00000312438 TRAV30A0A087WSZ9 112 aa13.16□□□□□ -0.3
CLCF1-201ENST00000312438 A6NDX4 124 aa13.16□□□□□ -0.3
CLCF1-201ENST00000312438 C11orf94C9JXX5 98 aa13.16□□□□□ -0.3
CLCF1-201ENST00000312438 H3BQ15 152 aa13.16□□□□□ -0.3
CLCF1-201ENST00000312438 PLP1P60201 277 aa13.16□□□□□ -0.3
CLCF1-201ENST00000312438 KLK9Q2XQG4 91 aa13.16□□□□□ -0.3
CLCF1-201ENST00000312438 CST9LP1Q5W188 147 aa13.16□□□□□ -0.3
CLCF1-201ENST00000312438 GSX1Q9H4S2 264 aaPredicted RBP13.16□□□□□ -0.3
CLCF1-201ENST00000312438 TMEM167BQ9NRX6 74 aa13.16□□□□□ -0.3
CLCF1-201ENST00000312438 DOK5Q9P104 306 aa13.16□□□□□ -0.3
CLCF1-201ENST00000312438 KLK9Q9UKQ9 250 aa13.16□□□□□ -0.3
CLCF1-201ENST00000312438 PTPN13Q12923 2485 aa13.15□□□□□ -0.3
CLCF1-201ENST00000312438 M0QZK8 103 aa13.15□□□□□ -0.3
CLCF1-201ENST00000312438 M0R036 132 aa13.15□□□□□ -0.3
CLCF1-201ENST00000312438 DNASE2O00115 360 aaPredicted RBP13.15□□□□□ -0.3
CLCF1-201ENST00000312438 AMY1AP04745 511 aa13.15□□□□□ -0.3
CLCF1-201ENST00000312438 ORM2P19652 201 aa13.15□□□□□ -0.3
CLCF1-201ENST00000312438 MFAP4P55083 255 aa13.15□□□□□ -0.3
CLCF1-201ENST00000312438 UBE2G2P60604 165 aa13.15□□□□□ -0.3
CLCF1-201ENST00000312438 CYB5R2Q6BCY4 276 aa13.15□□□□□ -0.3
CLCF1-201ENST00000312438 SUN5Q8TC36 379 aa13.15□□□□□ -0.3
CLCF1-201ENST00000312438 NAV3Q8IVL0 2385 aa13.14□□□□□ -0.31
CLCF1-201ENST00000312438 LINC01548A6NM66 108 aa13.14□□□□□ -0.31
CLCF1-201ENST00000312438 PDE6DO43924 150 aa13.14□□□□□ -0.31
CLCF1-201ENST00000312438 HYPMO75409 117 aa13.14□□□□□ -0.31
CLCF1-201ENST00000312438 LY6EQ16553 131 aa13.14□□□□□ -0.31
CLCF1-201ENST00000312438 ECSCRQ19T08 205 aa13.14□□□□□ -0.31
CLCF1-201ENST00000312438 ZNF48Q96MX3 618 aaPredicted RBP13.14□□□□□ -0.31
CLCF1-201ENST00000312438 SH2D7A6NKC9 451 aaPredicted RBP13.13□□□□□ -0.31
CLCF1-201ENST00000312438 OR7C2O60412 319 aa13.13□□□□□ -0.31
CLCF1-201ENST00000312438 NDUFB8O95169 186 aa13.13□□□□□ -0.31
CLCF1-201ENST00000312438 IGKV1-17P01599 117 aa13.13□□□□□ -0.31
CLCF1-201ENST00000312438 RD3LP0DJH9 198 aa13.13□□□□□ -0.31
CLCF1-201ENST00000312438 PSG1P11464 419 aa13.13□□□□□ -0.31
CLCF1-201ENST00000312438 TIGITQ495A1 244 aa13.13□□□□□ -0.31
CLCF1-201ENST00000312438 FAM74A3Q4VXF1 159 aa13.13□□□□□ -0.31
CLCF1-201ENST00000312438 AWAT1Q58HT5 328 aa13.13□□□□□ -0.31
CLCF1-201ENST00000312438 C16orf82Q7Z2V1 217 aa13.13□□□□□ -0.31
CLCF1-201ENST00000312438 LINC00305Q7Z4B0 112 aa13.13□□□□□ -0.31
CLCF1-201ENST00000312438 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.13□□□□□ -0.31
CLCF1-201ENST00000312438 OR1B1Q8NGR6 318 aa13.13□□□□□ -0.31
CLCF1-201ENST00000312438 TVP23CQ96ET8 276 aa13.13□□□□□ -0.31
CLCF1-201ENST00000312438 C21orf62Q9NYP8 219 aa13.13□□□□□ -0.31
CLCF1-201ENST00000312438 FBXL7Q9UJT9 491 aa13.13□□□□□ -0.31
CLCF1-201ENST00000312438 ARL2-SNX15V9GYD0 113 aa13.13□□□□□ -0.31
CLCF1-201ENST00000312438 C7orf77A4D0Y5 90 aa13.13□□□□□ -0.31
CLCF1-201ENST00000312438 FAM74A7A6NL05 159 aa13.13□□□□□ -0.31
CLCF1-201ENST00000312438 GNG7O60262 68 aa13.13□□□□□ -0.31
CLCF1-201ENST00000312438 OR2J3O76001 311 aa13.13□□□□□ -0.31
CLCF1-201ENST00000312438 RHEBQ15382 184 aa13.13□□□□□ -0.31
CLCF1-201ENST00000312438 ZNF503Q96F45 646 aa13.13□□□□□ -0.31
CLCF1-201ENST00000312438 FAM167A-AS1Q96KT0 104 aa13.13□□□□□ -0.31
CLCF1-201ENST00000312438 C20orf24Q9BUV8 137 aa13.13□□□□□ -0.31
CLCF1-201ENST00000312438 SLC25A2Q9BXI2 301 aa13.13□□□□□ -0.31
CLCF1-201ENST00000312438 RPS10P5Q9NQ39 176 aa13.13□□□□□ -0.31
CLCF1-201ENST00000312438 ZNF355PQ9NSJ1 428 aa13.13□□□□□ -0.31
CLCF1-201ENST00000312438 TRAV5A0A0B4J249 113 aa13.12□□□□□ -0.31
CLCF1-201ENST00000312438 ZNF727A8MUV8 499 aa13.12□□□□□ -0.31
CLCF1-201ENST00000312438 F6UZH7 168 aa13.12□□□□□ -0.31
CLCF1-201ENST00000312438 CRIP2P52943 208 aaPredicted RBP13.12□□□□□ -0.31
CLCF1-201ENST00000312438 MORN5Q5VZ52 161 aa13.12□□□□□ -0.31
CLCF1-201ENST00000312438 OR51G1Q8NGK1 321 aa13.12□□□□□ -0.31
CLCF1-201ENST00000312438 VN1R17PQ8TDU5 208 aa13.12□□□□□ -0.31
CLCF1-201ENST00000312438 UHRF2Q96PU4 802 aa13.12□□□□□ -0.31
CLCF1-201ENST00000312438 TXN2Q99757 166 aa13.12□□□□□ -0.31
CLCF1-201ENST00000312438 G3V318 75 aa13.11□□□□□ -0.31
CLCF1-201ENST00000312438 NUPL2O15504 423 aaKnown RBP13.11□□□□□ -0.31
CLCF1-201ENST00000312438 ATP5G3P48201 142 aa13.11□□□□□ -0.31
CLCF1-201ENST00000312438 YPEL3P61236 119 aaPredicted RBP13.11□□□□□ -0.31
CLCF1-201ENST00000312438 DEFB112Q30KQ8 113 aa13.11□□□□□ -0.31
CLCF1-201ENST00000312438 STXBP6Q8NFX7 210 aa13.11□□□□□ -0.31
CLCF1-201ENST00000312438 OR5AU1Q8NGC0 362 aa13.11□□□□□ -0.31
CLCF1-201ENST00000312438 NAV2Q8IVL1 2488 aa13.11□□□□□ -0.31
CLCF1-201ENST00000312438 TRBV9A0A0B4J1U6 114 aa13.11□□□□□ -0.31
CLCF1-201ENST00000312438 SCGB2A1O75556 95 aa13.11□□□□□ -0.31
CLCF1-201ENST00000312438 TOMM40O96008 361 aa13.11□□□□□ -0.31
CLCF1-201ENST00000312438 FSHBP01225 129 aa13.11□□□□□ -0.31
CLCF1-201ENST00000312438 FCGR2BP31994 310 aaPredicted RBP13.11□□□□□ -0.31
CLCF1-201ENST00000312438 PNRC1Q12796 327 aaPredicted RBP13.11□□□□□ -0.31
CLCF1-201ENST00000312438 Q56UQ5 140 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 102.7 ms