RNA–Protein interactions for RNA: ENST00000308354.11

PDLIM2-202, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,236 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-202ENST00000308354 ANKRD17O75179 2603 aaKnown RBP17.83■□□□□ 0.44
PDLIM2-202ENST00000308354 NPFFO15130 113 aa17.83■□□□□ 0.44
PDLIM2-202ENST00000308354 CLN5O75503 358 aa17.83■□□□□ 0.44
PDLIM2-202ENST00000308354 TMEM11P17152 192 aa17.83■□□□□ 0.44
PDLIM2-202ENST00000308354 ZNF114Q8NC26 417 aa17.83■□□□□ 0.44
PDLIM2-202ENST00000308354 TMEM37Q8WXS4 190 aa17.83■□□□□ 0.44
PDLIM2-202ENST00000308354 TXNDC17Q9BRA2 123 aa17.83■□□□□ 0.44
PDLIM2-202ENST00000308354 AURKAIP1Q9NWT8 199 aaPredicted RBP17.83■□□□□ 0.44
PDLIM2-202ENST00000308354 ABCA12Q86UK0 2595 aa17.82■□□□□ 0.44
PDLIM2-202ENST00000308354 ZNF90Q03938 601 aa17.82■□□□□ 0.44
PDLIM2-202ENST00000308354 NECAP1Q8NC96 275 aa17.82■□□□□ 0.44
PDLIM2-202ENST00000308354 OR1P1Q8NH06 330 aa17.82■□□□□ 0.44
PDLIM2-202ENST00000308354 FAM210BQ96KR6 192 aa17.82■□□□□ 0.44
PDLIM2-202ENST00000308354 F11RQ9Y624 299 aaKnown RBP17.82■□□□□ 0.44
PDLIM2-202ENST00000308354 OR5G3P0C626 314 aa17.82■□□□□ 0.44
PDLIM2-202ENST00000308354 Q8N6K4 173 aa17.82■□□□□ 0.44
PDLIM2-202ENST00000308354 PGPEP1LA6NFU8 196 aa17.81■□□□□ 0.44
PDLIM2-202ENST00000308354 BRD3OSQ6XYD6 125 aa17.81■□□□□ 0.44
PDLIM2-202ENST00000308354 LINC01551Q86U37 167 aa17.81■□□□□ 0.44
PDLIM2-202ENST00000308354 ZNF503Q96F45 646 aa17.81■□□□□ 0.44
PDLIM2-202ENST00000308354 TECRQ9NZ01 308 aaKnown RBP17.81■□□□□ 0.44
PDLIM2-202ENST00000308354 DOK5Q9P104 306 aa17.81■□□□□ 0.44
PDLIM2-202ENST00000308354 IGKV1D-37A0A075B6S9 117 aa17.8■□□□□ 0.44
PDLIM2-202ENST00000308354 H7BYZ3 331 aa17.8■□□□□ 0.44
PDLIM2-202ENST00000308354 LINC00518Q8N0U6 118 aa17.8■□□□□ 0.44
PDLIM2-202ENST00000308354 WNT10AQ9GZT5 417 aa17.8■□□□□ 0.44
PDLIM2-202ENST00000308354 TRBV20OR9-2A0A075B6H5 130 aa17.8■□□□□ 0.44
PDLIM2-202ENST00000308354 OR7C2O60412 319 aa17.8■□□□□ 0.44
PDLIM2-202ENST00000308354 EBI3Q14213 229 aa17.8■□□□□ 0.44
PDLIM2-202ENST00000308354 CLEC12BQ2HXU8 276 aa17.8■□□□□ 0.44
PDLIM2-202ENST00000308354 PVRIGQ6DKI7 326 aa17.8■□□□□ 0.44
PDLIM2-202ENST00000308354 TENM4Q6N022 2769 aa17.8■□□□□ 0.44
PDLIM2-202ENST00000308354 TRAV40A0A0B4J280 105 aa17.79■□□□□ 0.44
PDLIM2-202ENST00000308354 PSMB11A5LHX3 300 aa17.79■□□□□ 0.44
PDLIM2-202ENST00000308354 CX3CL1P78423 397 aa17.79■□□□□ 0.44
PDLIM2-202ENST00000308354 NDPQ00604 133 aa17.79■□□□□ 0.44
PDLIM2-202ENST00000308354 MORN5Q5VZ52 161 aa17.79■□□□□ 0.44
PDLIM2-202ENST00000308354 C19orf24Q9BVV8 132 aa17.79■□□□□ 0.44
PDLIM2-202ENST00000308354 ELOVL1Q9BW60 279 aa17.79■□□□□ 0.44
PDLIM2-202ENST00000308354 FAM106CPP0CH98 169 aa17.79■□□□□ 0.44
PDLIM2-202ENST00000308354 FABP9Q0Z7S8 132 aa17.79■□□□□ 0.44
PDLIM2-202ENST00000308354 KLF17Q5JT82 389 aaPredicted RBP17.79■□□□□ 0.44
PDLIM2-202ENST00000308354 GSX1Q9H4S2 264 aaPredicted RBP17.79■□□□□ 0.44
PDLIM2-202ENST00000308354 TRBV24-1A0A075B6N3 115 aa17.78■□□□□ 0.44
PDLIM2-202ENST00000308354 TCRBV4S1A1TA0A5B7 111 aa17.78■□□□□ 0.44
PDLIM2-202ENST00000308354 UBE2CO00762 179 aa17.78■□□□□ 0.44
PDLIM2-202ENST00000308354 OR10J4P0C629 311 aa17.78■□□□□ 0.44
PDLIM2-202ENST00000308354 THAP8Q8NA92 274 aa17.78■□□□□ 0.44
PDLIM2-202ENST00000308354 KMT2BQ9UMN6 2715 aaPredicted RBP17.78■□□□□ 0.44
PDLIM2-202ENST00000308354 TRGC2P03986 189 aa17.78■□□□□ 0.44
PDLIM2-202ENST00000308354 CRYGCP07315 174 aa17.78■□□□□ 0.44
PDLIM2-202ENST00000308354 PFN1P07737 140 aaKnown RBP17.78■□□□□ 0.44
PDLIM2-202ENST00000308354 GALR1P47211 349 aa17.78■□□□□ 0.44
PDLIM2-202ENST00000308354 PQLC2Q6ZP29 291 aa17.78■□□□□ 0.44
PDLIM2-202ENST00000308354 TMEM167BQ9NRX6 74 aa17.78■□□□□ 0.44
PDLIM2-202ENST00000308354 TAS2R45P59539 299 aa17.77■□□□□ 0.44
PDLIM2-202ENST00000308354 ETFRF1Q6IPR1 90 aa17.77■□□□□ 0.44
PDLIM2-202ENST00000308354 ANAPC16Q96DE5 110 aa17.77■□□□□ 0.44
PDLIM2-202ENST00000308354 DNAJC4Q9NNZ3 241 aa17.77■□□□□ 0.44
PDLIM2-202ENST00000308354 TRAV5A0A0B4J249 113 aa17.76■□□□□ 0.43
PDLIM2-202ENST00000308354 MSMBP08118 114 aa17.76■□□□□ 0.43
PDLIM2-202ENST00000308354 IGHV4-38-2P0DP08 117 aa17.76■□□□□ 0.43
PDLIM2-202ENST00000308354 BRS3P32247 399 aa17.76■□□□□ 0.43
PDLIM2-202ENST00000308354 ZNF562Q6V9R5 426 aa17.76■□□□□ 0.43
PDLIM2-202ENST00000308354 SOX21Q9Y651 276 aaPredicted RBP17.76■□□□□ 0.43
PDLIM2-202ENST00000308354 AP4M1O00189 453 aa17.76■□□□□ 0.43
PDLIM2-202ENST00000308354 C8orf88P0DMB2 117 aa17.76■□□□□ 0.43
PDLIM2-202ENST00000308354 MAPK1IP1LQ8NDC0 245 aa17.76■□□□□ 0.43
PDLIM2-202ENST00000308354 ARPC1AQ92747 370 aa17.76■□□□□ 0.43
PDLIM2-202ENST00000308354 OR5B12Q96R08 314 aa17.76■□□□□ 0.43
PDLIM2-202ENST00000308354 C7orf69Q9H7B7 122 aa17.76■□□□□ 0.43
PDLIM2-202ENST00000308354 IGHV1-69DA0A0B4J2H0 117 aa17.75■□□□□ 0.43
PDLIM2-202ENST00000308354 COX7A2P2O60397 106 aa17.75■□□□□ 0.43
PDLIM2-202ENST00000308354 IGHV1-69P01742 117 aa17.75■□□□□ 0.43
PDLIM2-202ENST00000308354 Q8N9W7 124 aa17.75■□□□□ 0.43
PDLIM2-202ENST00000308354 UHRF2Q96PU4 802 aa17.75■□□□□ 0.43
PDLIM2-202ENST00000308354 SLC25A2Q9BXI2 301 aa17.75■□□□□ 0.43
PDLIM2-202ENST00000308354 MRPL32Q9BYC8 188 aaKnown RBP17.75■□□□□ 0.43
PDLIM2-202ENST00000308354 TNFRSF19Q9NS68 423 aa17.75■□□□□ 0.43
PDLIM2-202ENST00000308354 PAX1P15863 534 aa17.75■□□□□ 0.43
PDLIM2-202ENST00000308354 ASPHD1Q5U4P2 390 aa17.75■□□□□ 0.43
PDLIM2-202ENST00000308354 OR4X1Q8NH49 305 aa17.75■□□□□ 0.43
PDLIM2-202ENST00000308354 FAM167A-AS1Q96KT0 104 aa17.75■□□□□ 0.43
PDLIM2-202ENST00000308354 CORTO00230 105 aa17.74■□□□□ 0.43
PDLIM2-202ENST00000308354 HNF1AP20823 631 aa17.74■□□□□ 0.43
PDLIM2-202ENST00000308354 PATE2Q6UY27 113 aa17.74■□□□□ 0.43
PDLIM2-202ENST00000308354 C11orf52Q96A22 123 aa17.74■□□□□ 0.43
PDLIM2-202ENST00000308354 HIF1ANQ9NWT6 349 aa17.74■□□□□ 0.43
PDLIM2-202ENST00000308354 ARL2-SNX15V9GYD0 113 aa17.74■□□□□ 0.43
PDLIM2-202ENST00000308354 SH2D7A6NKC9 451 aaPredicted RBP17.74■□□□□ 0.43
PDLIM2-202ENST00000308354 I3L2K1 104 aa17.74■□□□□ 0.43
PDLIM2-202ENST00000308354 S100PP25815 95 aa17.74■□□□□ 0.43
PDLIM2-202ENST00000308354 DSCR9P59020 149 aa17.74■□□□□ 0.43
PDLIM2-202ENST00000308354 C10orf113Q5VZT2 155 aa17.74■□□□□ 0.43
PDLIM2-202ENST00000308354 TMEM116Q8NCL8 245 aa17.74■□□□□ 0.43
PDLIM2-202ENST00000308354 SRSF8Q9BRL6 282 aaKnown RBP17.74■□□□□ 0.43
PDLIM2-202ENST00000308354 S4R3C0 116 aa17.74■□□□□ 0.43
PDLIM2-202ENST00000308354 HIST1H2BKO60814 126 aa17.73■□□□□ 0.43
PDLIM2-202ENST00000308354 HIST1H2BJP06899 126 aa17.73■□□□□ 0.43
PDLIM2-202ENST00000308354 HIST1H2BOP23527 126 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms