RNA–Protein interactions for RNA: ENST00000306658.7

KRT28-201, Transcript of keratin 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRT28, Length 1,685 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28-201ENST00000306658 LCN15Q6UWW0 184 aa13.74□□□□□ -0.21
KRT28-201ENST00000306658 TMEM86BQ8N661 226 aa13.74□□□□□ -0.21
KRT28-201ENST00000306658 RAB24Q969Q5 203 aa13.74□□□□□ -0.21
KRT28-201ENST00000306658 C19orf24Q9BVV8 132 aa13.74□□□□□ -0.21
KRT28-201ENST00000306658 TRAV30A0A087WSZ9 112 aa13.73□□□□□ -0.21
KRT28-201ENST00000306658 TRBV9A0A0B4J1U6 114 aa13.73□□□□□ -0.21
KRT28-201ENST00000306658 MAP1LC3B2A6NCE7 125 aa13.73□□□□□ -0.21
KRT28-201ENST00000306658 NDUFB8O95169 186 aa13.73□□□□□ -0.21
KRT28-201ENST00000306658 FABP1P07148 127 aa13.73□□□□□ -0.21
KRT28-201ENST00000306658 ZNF90Q03938 601 aa13.73□□□□□ -0.21
KRT28-201ENST00000306658 NECAP1Q8NC96 275 aa13.73□□□□□ -0.21
KRT28-201ENST00000306658 VN1R17PQ8TDU5 208 aa13.73□□□□□ -0.21
KRT28-201ENST00000306658 MAP1LC3BQ9GZQ8 125 aa13.73□□□□□ -0.21
KRT28-201ENST00000306658 SLC25A22Q9H936 323 aa13.73□□□□□ -0.21
KRT28-201ENST00000306658 C21orf62Q9NYP8 219 aa13.73□□□□□ -0.21
KRT28-201ENST00000306658 LINC00527Q9UJ94 153 aa13.73□□□□□ -0.21
KRT28-201ENST00000306658 ZFHX3Q15911 3703 aa13.73□□□□□ -0.21
KRT28-201ENST00000306658 IGLC1P0CG04 106 aa13.72□□□□□ -0.21
KRT28-201ENST00000306658 RHOBP62745 196 aa13.72□□□□□ -0.21
KRT28-201ENST00000306658 SSX7Q7RTT5 188 aa13.72□□□□□ -0.21
KRT28-201ENST00000306658 PBDC1Q9BVG4 233 aa13.72□□□□□ -0.21
KRT28-201ENST00000306658 PRSS22Q9GZN4 317 aa13.72□□□□□ -0.21
KRT28-201ENST00000306658 NPFFR1Q9GZQ6 430 aa13.72□□□□□ -0.21
KRT28-201ENST00000306658 ZNF580Q9UK33 172 aa13.72□□□□□ -0.21
KRT28-201ENST00000306658 GNG7O60262 68 aa13.72□□□□□ -0.21
KRT28-201ENST00000306658 SCGB2A1O75556 95 aa13.72□□□□□ -0.21
KRT28-201ENST00000306658 RHOGP84095 191 aa13.72□□□□□ -0.21
KRT28-201ENST00000306658 Q6ZS46 218 aa13.72□□□□□ -0.21
KRT28-201ENST00000306658 TXN2Q99757 166 aa13.72□□□□□ -0.21
KRT28-201ENST00000306658 H3BUA1 57 aa13.71□□□□□ -0.21
KRT28-201ENST00000306658 CCL20P78556 96 aa13.71□□□□□ -0.21
KRT28-201ENST00000306658 C15orf32Q32M92 178 aa13.71□□□□□ -0.21
KRT28-201ENST00000306658 GATAD1Q8WUU5 269 aa13.71□□□□□ -0.21
KRT28-201ENST00000306658 NOL4LQ96MY1 436 aaPredicted RBP13.71□□□□□ -0.21
KRT28-201ENST00000306658 FAM210AQ96ND0 272 aa13.71□□□□□ -0.21
KRT28-201ENST00000306658 PFDN5Q99471 154 aa13.71□□□□□ -0.21
KRT28-201ENST00000306658 I3L521 148 aa13.7□□□□□ -0.22
KRT28-201ENST00000306658 BRI3O95415 125 aa13.7□□□□□ -0.22
KRT28-201ENST00000306658 PPIFP30405 207 aaKnown RBP13.7□□□□□ -0.22
KRT28-201ENST00000306658 FCGR2BP31994 310 aaPredicted RBP13.7□□□□□ -0.22
KRT28-201ENST00000306658 FGF8P55075 233 aaPredicted RBP13.7□□□□□ -0.22
KRT28-201ENST00000306658 Q56UQ5 140 aa13.7□□□□□ -0.22
KRT28-201ENST00000306658 OR1L4Q8NGR5 311 aa13.7□□□□□ -0.22
KRT28-201ENST00000306658 MS4A10Q96PG2 267 aa13.7□□□□□ -0.22
KRT28-201ENST00000306658 RNF2Q99496 336 aa13.7□□□□□ -0.22
KRT28-201ENST00000306658 EIF5A2Q9GZV4 153 aaKnown RBP13.7□□□□□ -0.22
KRT28-201ENST00000306658 GSX1Q9H4S2 264 aaPredicted RBP13.7□□□□□ -0.22
KRT28-201ENST00000306658 DNAJC4Q9NNZ3 241 aa13.7□□□□□ -0.22
KRT28-201ENST00000306658 FLNBO75369 2602 aaKnown RBP13.7□□□□□ -0.22
KRT28-201ENST00000306658 FAM223BA6NKX1 122 aa13.69□□□□□ -0.22
KRT28-201ENST00000306658 HMGB3O15347 200 aaKnown RBP13.69□□□□□ -0.22
KRT28-201ENST00000306658 GUK1Q16774 197 aa13.69□□□□□ -0.22
KRT28-201ENST00000306658 TIGITQ495A1 244 aa13.69□□□□□ -0.22
KRT28-201ENST00000306658 FAM78BQ5VT40 261 aa13.69□□□□□ -0.22
KRT28-201ENST00000306658 FAM223AQ8IWN6 122 aa13.69□□□□□ -0.22
KRT28-201ENST00000306658 SEPSECSQ9HD40 501 aaKnown RBP13.69□□□□□ -0.22
KRT28-201ENST00000306658 GAR1Q9NY12 217 aaKnown RBP13.69□□□□□ -0.22
KRT28-201ENST00000306658 S4R3C0 116 aa13.69□□□□□ -0.22
KRT28-201ENST00000306658 ELOA3CA0A087WX78 387 aaPredicted RBP13.69□□□□□ -0.22
KRT28-201ENST00000306658 COX7A2P2O60397 106 aa13.69□□□□□ -0.22
KRT28-201ENST00000306658 LY6G6DO95868 133 aa13.69□□□□□ -0.22
KRT28-201ENST00000306658 IGKV1-17P01599 117 aa13.69□□□□□ -0.22
KRT28-201ENST00000306658 RD3LP0DJH9 198 aa13.69□□□□□ -0.22
KRT28-201ENST00000306658 PEA15Q15121 130 aa13.69□□□□□ -0.22
KRT28-201ENST00000306658 EEF1AKMT3Q96AZ1 226 aa13.69□□□□□ -0.22
KRT28-201ENST00000306658 SMR3AQ99954 134 aa13.69□□□□□ -0.22
KRT28-201ENST00000306658 TREM1Q9NP99 234 aa13.69□□□□□ -0.22
KRT28-201ENST00000306658 FUT9Q9Y231 359 aa13.69□□□□□ -0.22
KRT28-201ENST00000306658 OTOGQ6ZRI0 2925 aa13.68□□□□□ -0.22
KRT28-201ENST00000306658 TRBV7-1A0A0A6YYK4 115 aa13.68□□□□□ -0.22
KRT28-201ENST00000306658 TRGV3P03979 118 aa13.68□□□□□ -0.22
KRT28-201ENST00000306658 PSG1P11464 419 aa13.68□□□□□ -0.22
KRT28-201ENST00000306658 YPEL3P61236 119 aaPredicted RBP13.68□□□□□ -0.22
KRT28-201ENST00000306658 DEFA5Q01523 94 aa13.68□□□□□ -0.22
KRT28-201ENST00000306658 ATP5G2Q06055 141 aa13.68□□□□□ -0.22
KRT28-201ENST00000306658 PMS2P11Q13670 270 aa13.68□□□□□ -0.22
KRT28-201ENST00000306658 C10orf113Q5VZT2 155 aa13.68□□□□□ -0.22
KRT28-201ENST00000306658 ZNF502Q8TBZ5 544 aa13.68□□□□□ -0.22
KRT28-201ENST00000306658 TMEM37Q8WXS4 190 aa13.68□□□□□ -0.22
KRT28-201ENST00000306658 MRPL32Q9BYC8 188 aaKnown RBP13.68□□□□□ -0.22
KRT28-201ENST00000306658 HIVEP2P31629 2446 aa13.68□□□□□ -0.22
KRT28-201ENST00000306658 PSMB11A5LHX3 300 aa13.67□□□□□ -0.22
KRT28-201ENST00000306658 RBFOX3A6NFN3 312 aa13.67□□□□□ -0.22
KRT28-201ENST00000306658 EIF3GO75821 320 aaKnown RBP eCLIP13.67□□□□□ -0.22
KRT28-201ENST00000306658 CXorf1O96002 111 aa13.67□□□□□ -0.22
KRT28-201ENST00000306658 IFNA1P01562 189 aa13.67□□□□□ -0.22
KRT28-201ENST00000306658 CD5P06127 495 aa13.67□□□□□ -0.22
KRT28-201ENST00000306658 OR5G3P0C626 314 aa13.67□□□□□ -0.22
KRT28-201ENST00000306658 STAG3L2P0CL84 134 aa13.67□□□□□ -0.22
KRT28-201ENST00000306658 STAG3L3P0CL85 134 aa13.67□□□□□ -0.22
KRT28-201ENST00000306658 FOSL1P15407 271 aa13.67□□□□□ -0.22
KRT28-201ENST00000306658 SRSF3P84103 164 aaKnown RBP13.67□□□□□ -0.22
KRT28-201ENST00000306658 TOR2AQ5JU69 321 aa13.67□□□□□ -0.22
KRT28-201ENST00000306658 NARS2Q96I59 477 aaKnown RBP13.67□□□□□ -0.22
KRT28-201ENST00000306658 DUX5Q96PT3 197 aa13.67□□□□□ -0.22
KRT28-201ENST00000306658 GNG13Q9P2W3 67 aa13.67□□□□□ -0.22
KRT28-201ENST00000306658 CDC42EP3Q9UKI2 254 aa13.67□□□□□ -0.22
KRT28-201ENST00000306658 KRBOX1C9JBD0 128 aa13.66□□□□□ -0.22
KRT28-201ENST00000306658 F8W735 103 aaPredicted RBP13.66□□□□□ -0.22
KRT28-201ENST00000306658 HYPMO75409 117 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms