RNA–Protein interactions for RNA: ENST00000302731.4

CLP1-201, Transcript of cleavage and polyadenylation factor I subunit 1, humanhuman

TSL 2 BASIC

Gene CLP1, Length 1,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLP1-201ENST00000302731 C7orf69Q9H7B7 122 aa8.37□□□□□ -1.07
CLP1-201ENST00000302731 TMEM242Q9NWH2 141 aa8.37□□□□□ -1.07
CLP1-201ENST00000302731 DOK5Q9P104 306 aa8.37□□□□□ -1.07
CLP1-201ENST00000302731 ZFYVE26Q68DK2 2539 aa8.37□□□□□ -1.07
CLP1-201ENST00000302731 TRAV30A0A087WSZ9 112 aa8.36□□□□□ -1.07
CLP1-201ENST00000302731 J3QLI3 93 aa8.36□□□□□ -1.07
CLP1-201ENST00000302731 EGR2P11161 476 aaPredicted RBP8.36□□□□□ -1.07
CLP1-201ENST00000302731 HIST1H1BP16401 226 aaKnown RBP8.36□□□□□ -1.07
CLP1-201ENST00000302731 ATP5G3P48201 142 aa8.36□□□□□ -1.07
CLP1-201ENST00000302731 UBE2G2P60604 165 aa8.36□□□□□ -1.07
CLP1-201ENST00000302731 AKIRIN2Q53H80 203 aa8.36□□□□□ -1.07
CLP1-201ENST00000302731 RUSC1-AS1Q66K80 236 aa8.36□□□□□ -1.07
CLP1-201ENST00000302731 PATE2Q6UY27 113 aa8.36□□□□□ -1.07
CLP1-201ENST00000302731 C11orf52Q96A22 123 aa8.36□□□□□ -1.07
CLP1-201ENST00000302731 ZNF503Q96F45 646 aa8.36□□□□□ -1.07
CLP1-201ENST00000302731 RBM14Q96PK6 669 aaKnown RBP8.36□□□□□ -1.07
CLP1-201ENST00000302731 HIF1ANQ9NWT6 349 aa8.36□□□□□ -1.07
CLP1-201ENST00000302731 MED13LQ71F56 2210 aa8.36□□□□□ -1.07
CLP1-201ENST00000302731 ABCA2Q9BZC7 2435 aa8.36□□□□□ -1.07
CLP1-201ENST00000302731 UBR5O95071 2799 aaPredicted RBP8.36□□□□□ -1.07
CLP1-201ENST00000302731 A0A1W2PRE2 83 aa8.36□□□□□ -1.07
CLP1-201ENST00000302731 COLCA2A8K830 154 aa8.36□□□□□ -1.07
CLP1-201ENST00000302731 OR7C2O60412 319 aa8.36□□□□□ -1.07
CLP1-201ENST00000302731 FCGR2BP31994 310 aaPredicted RBP8.36□□□□□ -1.07
CLP1-201ENST00000302731 DEFB113Q30KQ7 82 aa8.36□□□□□ -1.07
CLP1-201ENST00000302731 C5orf56Q8N8D9 126 aa8.36□□□□□ -1.07
CLP1-201ENST00000302731 FAM110DQ8TAY7 271 aaPredicted RBP8.36□□□□□ -1.07
CLP1-201ENST00000302731 RPUSD4Q96CM3 377 aaKnown RBP8.36□□□□□ -1.07
CLP1-201ENST00000302731 UHRF2Q96PU4 802 aa8.36□□□□□ -1.07
CLP1-201ENST00000302731 SLC25A2Q9BXI2 301 aa8.36□□□□□ -1.07
CLP1-201ENST00000302731 CTDSP1Q9GZU7 261 aa8.36□□□□□ -1.07
CLP1-201ENST00000302731 MOB4Q9Y3A3 225 aa8.36□□□□□ -1.07
CLP1-201ENST00000302731 YTHDF2Q9Y5A9 579 aaKnown RBP8.36□□□□□ -1.07
CLP1-201ENST00000302731 MYO18BQ8IUG5 2567 aa8.35□□□□□ -1.07
CLP1-201ENST00000302731 EPG5Q9HCE0 2579 aa8.35□□□□□ -1.07
CLP1-201ENST00000302731 HYPMO75409 117 aa8.35□□□□□ -1.07
CLP1-201ENST00000302731 IGKV1-17P01599 117 aa8.35□□□□□ -1.07
CLP1-201ENST00000302731 MT-ND4LP03901 98 aa8.35□□□□□ -1.07
CLP1-201ENST00000302731 NPPCP23582 126 aa8.35□□□□□ -1.07
CLP1-201ENST00000302731 AKR1C3P42330 323 aa8.35□□□□□ -1.07
CLP1-201ENST00000302731 MFAP4P55083 255 aa8.35□□□□□ -1.07
CLP1-201ENST00000302731 LINC00305Q7Z4B0 112 aa8.35□□□□□ -1.07
CLP1-201ENST00000302731 OR51G1Q8NGK1 321 aa8.35□□□□□ -1.07
CLP1-201ENST00000302731 PIFOQ8TCI5 191 aa8.35□□□□□ -1.07
CLP1-201ENST00000302731 MBD6Q96DN6 1003 aa8.35□□□□□ -1.07
CLP1-201ENST00000302731 TXN2Q99757 166 aa8.35□□□□□ -1.07
CLP1-201ENST00000302731 ZNF355PQ9NSJ1 428 aa8.35□□□□□ -1.07
CLP1-201ENST00000302731 FLNCQ14315 2725 aa8.34□□□□□ -1.07
CLP1-201ENST00000302731 IGHV3-21A0A0B4J1V1 117 aa8.34□□□□□ -1.07
CLP1-201ENST00000302731 A0A0U1RQK1 487 aa8.34□□□□□ -1.07
CLP1-201ENST00000302731 SCGB2A1O75556 95 aa8.34□□□□□ -1.07
CLP1-201ENST00000302731 OR2C1O95371 312 aa8.34□□□□□ -1.07
CLP1-201ENST00000302731 TOMM40O96008 361 aa8.34□□□□□ -1.07
CLP1-201ENST00000302731 IGHV4-38-2P0DP08 117 aa8.34□□□□□ -1.07
CLP1-201ENST00000302731 PSG1P11464 419 aa8.34□□□□□ -1.07
CLP1-201ENST00000302731 FOLR2P14207 255 aa8.34□□□□□ -1.07
CLP1-201ENST00000302731 CRIP2P52943 208 aaPredicted RBP8.34□□□□□ -1.07
CLP1-201ENST00000302731 YPEL3P61236 119 aaPredicted RBP8.34□□□□□ -1.07
CLP1-201ENST00000302731 ZNF674Q2M3X9 581 aa8.34□□□□□ -1.07
CLP1-201ENST00000302731 RNF212Q495C1 297 aa8.34□□□□□ -1.07
CLP1-201ENST00000302731 PRSS57Q6UWY2 283 aa8.34□□□□□ -1.07
CLP1-201ENST00000302731 BRD3OSQ6XYD6 125 aa8.34□□□□□ -1.07
CLP1-201ENST00000302731 OR5AU1Q8NGC0 362 aa8.34□□□□□ -1.07
CLP1-201ENST00000302731 OR1B1Q8NGR6 318 aa8.34□□□□□ -1.07
CLP1-201ENST00000302731 HSPB9Q9BQS6 159 aa8.34□□□□□ -1.07
CLP1-201ENST00000302731 OR51M1Q9H341 326 aa8.34□□□□□ -1.07
CLP1-201ENST00000302731 COL12A1Q99715 3063 aa8.33□□□□□ -1.08
CLP1-201ENST00000302731 J3QKU1 62 aa8.33□□□□□ -1.08
CLP1-201ENST00000302731 M0QZK8 103 aa8.33□□□□□ -1.08
CLP1-201ENST00000302731 NDUFB4O95168 129 aa8.33□□□□□ -1.08
CLP1-201ENST00000302731 RD3LP0DJH9 198 aa8.33□□□□□ -1.08
CLP1-201ENST00000302731 PLA2G2AP14555 144 aa8.33□□□□□ -1.08
CLP1-201ENST00000302731 ORM2P19652 201 aa8.33□□□□□ -1.08
CLP1-201ENST00000302731 KRTAP10-9P60411 292 aa8.33□□□□□ -1.08
CLP1-201ENST00000302731 RPL23P62829 140 aaKnown RBP8.33□□□□□ -1.08
CLP1-201ENST00000302731 UBE2L3P68036 154 aaKnown RBP8.33□□□□□ -1.08
CLP1-201ENST00000302731 MORN5Q5VZ52 161 aa8.33□□□□□ -1.08
CLP1-201ENST00000302731 S100A7AQ86SG5 101 aa8.33□□□□□ -1.08
CLP1-201ENST00000302731 VN1R17PQ8TDU5 208 aa8.33□□□□□ -1.08
CLP1-201ENST00000302731 TMEM190Q8WZ59 177 aa8.33□□□□□ -1.08
CLP1-201ENST00000302731 YPEL4Q96NS1 127 aa8.33□□□□□ -1.08
CLP1-201ENST00000302731 SSX3Q99909 188 aa8.33□□□□□ -1.08
CLP1-201ENST00000302731 TCEAL7Q9BRU2 100 aa8.33□□□□□ -1.08
CLP1-201ENST00000302731 PAXXQ9BUH6 204 aa8.33□□□□□ -1.08
CLP1-201ENST00000302731 IGHV3OR16-10A0A075B7F0 116 aa8.32□□□□□ -1.08
CLP1-201ENST00000302731 TRAV5A0A0B4J249 113 aa8.32□□□□□ -1.08
CLP1-201ENST00000302731 CLDN34H7C241 214 aa8.32□□□□□ -1.08
CLP1-201ENST00000302731 ATP6V0E1O15342 81 aa8.32□□□□□ -1.08
CLP1-201ENST00000302731 GNG7O60262 68 aa8.32□□□□□ -1.08
CLP1-201ENST00000302731 ATF4P18848 351 aaPredicted RBP8.32□□□□□ -1.08
CLP1-201ENST00000302731 COL8A1P27658 744 aa8.32□□□□□ -1.08
CLP1-201ENST00000302731 TIGITQ495A1 244 aa8.32□□□□□ -1.08
CLP1-201ENST00000302731 KLF17Q5JT82 389 aaPredicted RBP8.32□□□□□ -1.08
CLP1-201ENST00000302731 C16orf82Q7Z2V1 217 aa8.32□□□□□ -1.08
CLP1-201ENST00000302731 HIST1H2BAQ96A08 127 aa8.32□□□□□ -1.08
CLP1-201ENST00000302731 ANAPC16Q96DE5 110 aa8.32□□□□□ -1.08
CLP1-201ENST00000302731 C21orf62Q9NYP8 219 aa8.32□□□□□ -1.08
CLP1-201ENST00000302731 MRPL27Q9P0M9 148 aaKnown RBP8.32□□□□□ -1.08
CLP1-201ENST00000302731 PITPNC1Q9UKF7 332 aa8.32□□□□□ -1.08
CLP1-201ENST00000302731 HIGD1AQ9Y241 93 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms