RNA–Protein interactions for RNA: ENST00000302516.9

SF3B3-201, Transcript of splicing factor 3b subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B3, Length 9,720 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-201ENST00000302516 SAA1P0DJI8 122 aaPredicted RBP6.4□□□□□ -1.39
SF3B3-201ENST00000302516 LYL1P12980 280 aa6.4□□□□□ -1.39
SF3B3-201ENST00000302516 KIR3DL3Q8N743 410 aa6.4□□□□□ -1.39
SF3B3-201ENST00000302516 PHLDA1Q8WV24 401 aaPredicted RBP6.4□□□□□ -1.39
SF3B3-201ENST00000302516 TMEM42Q69YG0 159 aa6.4□□□□□ -1.39
SF3B3-201ENST00000302516 ZNF479Q96JC4 524 aa6.4□□□□□ -1.39
SF3B3-201ENST00000302516 MRPL20Q9BYC9 149 aaKnown RBP6.4□□□□□ -1.39
SF3B3-201ENST00000302516 AMBPP02760 352 aa6.39□□□□□ -1.39
SF3B3-201ENST00000302516 ID3Q02535 119 aa6.39□□□□□ -1.39
SF3B3-201ENST00000302516 EFNB3Q15768 340 aa6.39□□□□□ -1.39
SF3B3-201ENST00000302516 OR13A1Q8NGR1 328 aa6.39□□□□□ -1.39
SF3B3-201ENST00000302516 FNDC10F2Z333 226 aa6.39□□□□□ -1.39
SF3B3-201ENST00000302516 ESDP10768 282 aa6.39□□□□□ -1.39
SF3B3-201ENST00000302516 C8orf46Q8TAG6 207 aa6.39□□□□□ -1.39
SF3B3-201ENST00000302516 DLX4Q92988 240 aaPredicted RBP6.39□□□□□ -1.39
SF3B3-201ENST00000302516 FNDC4Q9H6D8 234 aaPredicted RBP6.39□□□□□ -1.39
SF3B3-201ENST00000302516 TRAV21A0A0B4J279 112 aa6.39□□□□□ -1.39
SF3B3-201ENST00000302516 CECR9P0C854 216 aa6.39□□□□□ -1.39
SF3B3-201ENST00000302516 PEAR1Q5VY43 1037 aaPredicted RBP6.39□□□□□ -1.39
SF3B3-201ENST00000302516 ST6GALNAC6Q969X2 333 aa6.39□□□□□ -1.39
SF3B3-201ENST00000302516 GFRA4Q9GZZ7 299 aa6.39□□□□□ -1.39
SF3B3-201ENST00000302516 DOCK10Q96BY6 2186 aa6.39□□□□□ -1.39
SF3B3-201ENST00000302516 ALPK3Q96L96 1907 aa6.39□□□□□ -1.39
SF3B3-201ENST00000302516 RAMP3O60896 148 aa6.39□□□□□ -1.39
SF3B3-201ENST00000302516 IGKV1D-33P01593 117 aa6.39□□□□□ -1.39
SF3B3-201ENST00000302516 IGKV1-33P01594 117 aa6.39□□□□□ -1.39
SF3B3-201ENST00000302516 SNRPCP09234 159 aaKnown RBP6.39□□□□□ -1.39
SF3B3-201ENST00000302516 ZNRF1Q8ND25 227 aa6.39□□□□□ -1.39
SF3B3-201ENST00000302516 SLC25A15Q9Y619 301 aa6.39□□□□□ -1.39
SF3B3-201ENST00000302516 SEPSECSQ9HD40 501 aaKnown RBP6.39□□□□□ -1.39
SF3B3-201ENST00000302516 PSMB11A5LHX3 300 aa6.38□□□□□ -1.39
SF3B3-201ENST00000302516 GGTLC3B5MD39 225 aa6.38□□□□□ -1.39
SF3B3-201ENST00000302516 DUSP14O95147 198 aaKnown RBP6.38□□□□□ -1.39
SF3B3-201ENST00000302516 EFEMP2O95967 443 aa6.38□□□□□ -1.39
SF3B3-201ENST00000302516 MEGF9Q9H1U4 602 aa6.38□□□□□ -1.39
SF3B3-201ENST00000302516 CNOT1A5YKK6 2376 aaKnown RBP6.38□□□□□ -1.39
SF3B3-201ENST00000302516 H3BTX0 84 aa6.38□□□□□ -1.39
SF3B3-201ENST00000302516 TBX6O95947 436 aaPredicted RBP6.38□□□□□ -1.39
SF3B3-201ENST00000302516 SRSF3P84103 164 aaKnown RBP6.38□□□□□ -1.39
SF3B3-201ENST00000302516 IGKV3D-15A0A087WSY6 115 aa6.38□□□□□ -1.39
SF3B3-201ENST00000302516 IGKV3-15P01624 115 aa6.38□□□□□ -1.39
SF3B3-201ENST00000302516 LURAP1LQ8IV03 231 aa6.38□□□□□ -1.39
SF3B3-201ENST00000302516 TMEM86BQ8N661 226 aa6.38□□□□□ -1.39
SF3B3-201ENST00000302516 IFI27L1Q96BM0 104 aa6.38□□□□□ -1.39
SF3B3-201ENST00000302516 REG4Q9BYZ8 158 aa6.38□□□□□ -1.39
SF3B3-201ENST00000302516 M0R2P5 195 aa6.38□□□□□ -1.39
SF3B3-201ENST00000302516 ZIC3O60481 467 aa6.38□□□□□ -1.39
SF3B3-201ENST00000302516 LGALS1P09382 135 aaKnown RBP6.38□□□□□ -1.39
SF3B3-201ENST00000302516 MORN2Q502X0 79 aa6.38□□□□□ -1.39
SF3B3-201ENST00000302516 PPP1R32Q7Z5V6 425 aa6.38□□□□□ -1.39
SF3B3-201ENST00000302516 TRGV9Q99603 122 aa6.38□□□□□ -1.39
SF3B3-201ENST00000302516 OVOL1O14753 267 aa6.38□□□□□ -1.39
SF3B3-201ENST00000302516 FAM90A2PQ658T7 463 aa6.38□□□□□ -1.39
SF3B3-201ENST00000302516 CUL9Q8IWT3 2517 aa6.38□□□□□ -1.39
SF3B3-201ENST00000302516 ZNF106Q9H2Y7 1883 aaKnown RBP6.38□□□□□ -1.39
SF3B3-201ENST00000302516 ZNF815PA8K554 130 aa6.38□□□□□ -1.39
SF3B3-201ENST00000302516 CFPP27918 469 aa6.38□□□□□ -1.39
SF3B3-201ENST00000302516 ATP5J2P56134 94 aa6.38□□□□□ -1.39
SF3B3-201ENST00000302516 TMEM95Q3KNT9 176 aa6.38□□□□□ -1.39
SF3B3-201ENST00000302516 CT83Q5H943 113 aa6.38□□□□□ -1.39
SF3B3-201ENST00000302516 RPRMLQ8N4K4 120 aa6.38□□□□□ -1.39
SF3B3-201ENST00000302516 PLEKHB2Q96CS7 222 aa6.38□□□□□ -1.39
SF3B3-201ENST00000302516 TRBV6-6A0A0A6YYG2 114 aa6.38□□□□□ -1.39
SF3B3-201ENST00000302516 TMEM167AQ8TBQ9 72 aa6.38□□□□□ -1.39
SF3B3-201ENST00000302516 IGHV4-39P01824 125 aa6.37□□□□□ -1.39
SF3B3-201ENST00000302516 MALP21145 153 aa6.37□□□□□ -1.39
SF3B3-201ENST00000302516 CKS1BP61024 79 aa6.37□□□□□ -1.39
SF3B3-201ENST00000302516 Q6ZS49 121 aa6.37□□□□□ -1.39
SF3B3-201ENST00000302516 IGHV3OR16-12A0A075B7B8 117 aa6.37□□□□□ -1.39
SF3B3-201ENST00000302516 LHFPL1Q86WI0 220 aa6.37□□□□□ -1.39
SF3B3-201ENST00000302516 UMODP07911 640 aa6.37□□□□□ -1.39
SF3B3-201ENST00000302516 GAGE2BQ13066 116 aa6.37□□□□□ -1.39
SF3B3-201ENST00000302516 GAGE2EQ4V326 116 aa6.37□□□□□ -1.39
SF3B3-201ENST00000302516 KLF17Q5JT82 389 aaPredicted RBP6.37□□□□□ -1.39
SF3B3-201ENST00000302516 CDCP2Q5VXM1 449 aa6.37□□□□□ -1.39
SF3B3-201ENST00000302516 GAGE2DQ9UEU5 116 aa6.37□□□□□ -1.39
SF3B3-201ENST00000302516 CRPP02741 224 aa6.37□□□□□ -1.39
SF3B3-201ENST00000302516 DUTP33316 252 aaKnown RBP6.37□□□□□ -1.39
SF3B3-201ENST00000302516 BSPH1Q075Z2 132 aa6.37□□□□□ -1.39
SF3B3-201ENST00000302516 IGLV3-12A0A075B6K2 115 aa6.37□□□□□ -1.39
SF3B3-201ENST00000302516 EGR1P18146 543 aa6.37□□□□□ -1.39
SF3B3-201ENST00000302516 SRSF6Q13247 344 aaKnown RBP6.37□□□□□ -1.39
SF3B3-201ENST00000302516 STPG1Q5TH74 334 aa6.37□□□□□ -1.39
SF3B3-201ENST00000302516 GLRX5Q86SX6 157 aa6.37□□□□□ -1.39
SF3B3-201ENST00000302516 DTX2Q86UW9 622 aa6.37□□□□□ -1.39
SF3B3-201ENST00000302516 LYPD1Q8N2G4 141 aa6.37□□□□□ -1.39
SF3B3-201ENST00000302516 TMEM133Q9H2Q1 129 aa6.37□□□□□ -1.39
SF3B3-201ENST00000302516 SPANXCQ9NY87 97 aa6.37□□□□□ -1.39
SF3B3-201ENST00000302516 CADP27708 2225 aa6.37□□□□□ -1.39
SF3B3-201ENST00000302516 PROB1E7EW31 1015 aa6.37□□□□□ -1.39
SF3B3-201ENST00000302516 WFDC1Q9HC57 220 aa6.37□□□□□ -1.39
SF3B3-201ENST00000302516 VKORC1Q9BQB6 163 aa6.37□□□□□ -1.39
SF3B3-201ENST00000302516 ZNF688P0C7X2 276 aa6.36□□□□□ -1.39
SF3B3-201ENST00000302516 SPTBN2O15020 2390 aa6.36□□□□□ -1.39
SF3B3-201ENST00000302516 RNF5Q99942 180 aa6.36□□□□□ -1.39
SF3B3-201ENST00000302516 DLEU1O43261 78 aa6.36□□□□□ -1.39
SF3B3-201ENST00000302516 LINC01551Q86U37 167 aa6.36□□□□□ -1.39
SF3B3-201ENST00000302516 ERG28Q9UKR5 140 aa6.36□□□□□ -1.39
SF3B3-201ENST00000302516 CD28P10747 220 aa6.36□□□□□ -1.39
SF3B3-201ENST00000302516 GNG5P63218 68 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms