RNA–Protein interactions for RNA: ENST00000301935.9

UBXN1-202, Transcript of UBX domain protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene UBXN1, Length 1,153 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-202ENST00000301935 OR5AU1Q8NGC0 362 aa11.71□□□□□ -0.53
UBXN1-202ENST00000301935 OR4X1Q8NH49 305 aa11.71□□□□□ -0.53
UBXN1-202ENST00000301935 EEF1AKMT3Q96AZ1 226 aa11.71□□□□□ -0.53
UBXN1-202ENST00000301935 MS4A10Q96PG2 267 aa11.71□□□□□ -0.53
UBXN1-202ENST00000301935 FBXL17Q9UF56 701 aa11.71□□□□□ -0.53
UBXN1-202ENST00000301935 NBEAL2Q6ZNJ1 2754 aa11.7□□□□□ -0.54
UBXN1-202ENST00000301935 BOLA2-SMG1P6H3BVE0 249 aa11.7□□□□□ -0.54
UBXN1-202ENST00000301935 K7EIL1 84 aa11.7□□□□□ -0.54
UBXN1-202ENST00000301935 BCL2L11O43521 198 aa11.7□□□□□ -0.54
UBXN1-202ENST00000301935 GAMTQ14353 236 aa11.7□□□□□ -0.54
UBXN1-202ENST00000301935 ACSM6Q6P461 480 aa11.7□□□□□ -0.54
UBXN1-202ENST00000301935 C19orf35Q6ZS72 473 aa11.7□□□□□ -0.54
UBXN1-202ENST00000301935 SCARB1Q8WTV0 552 aa11.7□□□□□ -0.54
UBXN1-202ENST00000301935 FNDC4Q9H6D8 234 aaPredicted RBP11.7□□□□□ -0.54
UBXN1-202ENST00000301935 C21orf62Q9NYP8 219 aa11.7□□□□□ -0.54
UBXN1-202ENST00000301935 COL7A1Q02388 2944 aa11.7□□□□□ -0.54
UBXN1-202ENST00000301935 A0A1W2PRX2 142 aa11.69□□□□□ -0.54
UBXN1-202ENST00000301935 FABP1P07148 127 aa11.69□□□□□ -0.54
UBXN1-202ENST00000301935 AKR1C1Q04828 323 aa11.69□□□□□ -0.54
UBXN1-202ENST00000301935 CLINT1Q14677 625 aa11.69□□□□□ -0.54
UBXN1-202ENST00000301935 TEPPQ6URK8 271 aa11.69□□□□□ -0.54
UBXN1-202ENST00000301935 UBAC2Q8NBM4 344 aa11.69□□□□□ -0.54
UBXN1-202ENST00000301935 SCGB1C1Q8TD33 95 aa11.69□□□□□ -0.54
UBXN1-202ENST00000301935 MYOZ3Q8TDC0 251 aa11.69□□□□□ -0.54
UBXN1-202ENST00000301935 UBE2E2Q96LR5 201 aa11.69□□□□□ -0.54
UBXN1-202ENST00000301935 SMCO3A2RU48 225 aa11.68□□□□□ -0.54
UBXN1-202ENST00000301935 CLN5O75503 358 aa11.68□□□□□ -0.54
UBXN1-202ENST00000301935 NKX2-5P52952 324 aaPredicted RBP11.68□□□□□ -0.54
UBXN1-202ENST00000301935 OPCMLQ14982 345 aa11.68□□□□□ -0.54
UBXN1-202ENST00000301935 LAMTOR1Q6IAA8 161 aa11.68□□□□□ -0.54
UBXN1-202ENST00000301935 SPSB3Q6PJ21 355 aa11.68□□□□□ -0.54
UBXN1-202ENST00000301935 SLC51BQ86UW2 128 aa11.68□□□□□ -0.54
UBXN1-202ENST00000301935 ZNF491Q8N8L2 437 aa11.68□□□□□ -0.54
UBXN1-202ENST00000301935 ZNF502Q8TBZ5 544 aa11.68□□□□□ -0.54
UBXN1-202ENST00000301935 NPIPB3Q92617 1050 aa11.68□□□□□ -0.54
UBXN1-202ENST00000301935 KLK15Q9H2R5 256 aa11.68□□□□□ -0.54
UBXN1-202ENST00000301935 WDR83OSQ9Y284 106 aa11.68□□□□□ -0.54
UBXN1-202ENST00000301935 GNG7O60262 68 aa11.67□□□□□ -0.54
UBXN1-202ENST00000301935 PF4P02776 101 aa11.67□□□□□ -0.54
UBXN1-202ENST00000301935 CDX1P47902 265 aaPredicted RBP11.67□□□□□ -0.54
UBXN1-202ENST00000301935 RND2P52198 227 aa11.67□□□□□ -0.54
UBXN1-202ENST00000301935 SELENOTP62341 195 aa11.67□□□□□ -0.54
UBXN1-202ENST00000301935 MLANAQ16655 118 aa11.67□□□□□ -0.54
UBXN1-202ENST00000301935 ZNF343Q6P1L6 599 aa11.67□□□□□ -0.54
UBXN1-202ENST00000301935 ZNF709Q8N972 641 aa11.67□□□□□ -0.54
UBXN1-202ENST00000301935 THAP8Q8NA92 274 aa11.67□□□□□ -0.54
UBXN1-202ENST00000301935 GNPNAT1Q96EK6 184 aaPredicted RBP11.67□□□□□ -0.54
UBXN1-202ENST00000301935 BSCL2Q96G97 398 aaPredicted RBP11.67□□□□□ -0.54
UBXN1-202ENST00000301935 ACY3Q96HD9 319 aa11.67□□□□□ -0.54
UBXN1-202ENST00000301935 SMIM3Q9BZL3 60 aa11.67□□□□□ -0.54
UBXN1-202ENST00000301935 KCNIP2Q9NS61 270 aa11.67□□□□□ -0.54
UBXN1-202ENST00000301935 C17orf112F2Z3M2 114 aa11.66□□□□□ -0.54
UBXN1-202ENST00000301935 CFDP00746 253 aaPredicted RBP11.66□□□□□ -0.54
UBXN1-202ENST00000301935 KIAA0141Q14154 515 aaPredicted RBP11.66□□□□□ -0.54
UBXN1-202ENST00000301935 Q56UQ5 140 aa11.66□□□□□ -0.54
UBXN1-202ENST00000301935 TCTEX1D4Q5JR98 221 aa11.66□□□□□ -0.54
UBXN1-202ENST00000301935 BTNL8Q6UX41 500 aa11.66□□□□□ -0.54
UBXN1-202ENST00000301935 RCC1LQ96I51 464 aaKnown RBP11.66□□□□□ -0.54
UBXN1-202ENST00000301935 TRGV9Q99603 122 aa11.66□□□□□ -0.54
UBXN1-202ENST00000301935 ZNF471Q9BX82 626 aaPredicted RBP11.66□□□□□ -0.54
UBXN1-202ENST00000301935 WDR61Q9GZS3 305 aaKnown RBP11.66□□□□□ -0.54
UBXN1-202ENST00000301935 WFDC1Q9HC57 220 aa11.66□□□□□ -0.54
UBXN1-202ENST00000301935 LSM4Q9Y4Z0 139 aaKnown RBP11.66□□□□□ -0.54
UBXN1-202ENST00000301935 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.65□□□□□ -0.54
UBXN1-202ENST00000301935 IGHV3-21A0A0B4J1V1 117 aa11.65□□□□□ -0.54
UBXN1-202ENST00000301935 UBE2L5PA0A1B0GUS4 154 aa11.65□□□□□ -0.54
UBXN1-202ENST00000301935 MFSD2BA6NFX1 497 aa11.65□□□□□ -0.54
UBXN1-202ENST00000301935 ZFP92A6NM28 416 aa11.65□□□□□ -0.54
UBXN1-202ENST00000301935 NUPL2O15504 423 aaKnown RBP11.65□□□□□ -0.54
UBXN1-202ENST00000301935 RPLP1P05386 114 aaKnown RBP11.65□□□□□ -0.54
UBXN1-202ENST00000301935 TPT1P13693 172 aaKnown RBP11.65□□□□□ -0.54
UBXN1-202ENST00000301935 FGF7P21781 194 aa11.65□□□□□ -0.54
UBXN1-202ENST00000301935 OR10J1P30954 320 aa11.65□□□□□ -0.54
UBXN1-202ENST00000301935 RUNX1Q01196 453 aa11.65□□□□□ -0.54
UBXN1-202ENST00000301935 RPL7L1Q6DKI1 246 aaKnown RBP11.65□□□□□ -0.54
UBXN1-202ENST00000301935 EIF5AL1Q6IS14 154 aaKnown RBP11.65□□□□□ -0.54
UBXN1-202ENST00000301935 STOML3Q8TAV4 291 aa11.65□□□□□ -0.54
UBXN1-202ENST00000301935 ARV1Q9H2C2 271 aa11.65□□□□□ -0.54
UBXN1-202ENST00000301935 CYTL1Q9NRR1 136 aa11.65□□□□□ -0.54
UBXN1-202ENST00000301935 TIMM9Q9Y5J7 89 aa11.65□□□□□ -0.54
UBXN1-202ENST00000301935 TSSC4Q9Y5U2 329 aaPredicted RBP11.65□□□□□ -0.54
UBXN1-202ENST00000301935 WI2-2373I1.2A0A1W2PRP0 233 aa11.64□□□□□ -0.55
UBXN1-202ENST00000301935 TCRBV4S1A1TA0A5B7 111 aa11.64□□□□□ -0.55
UBXN1-202ENST00000301935 CLEC3BP05452 202 aa11.64□□□□□ -0.55
UBXN1-202ENST00000301935 KRTAP10-11P60412 298 aa11.64□□□□□ -0.55
UBXN1-202ENST00000301935 YPEL3P61236 119 aaPredicted RBP11.64□□□□□ -0.55
UBXN1-202ENST00000301935 C10orf99Q6UWK7 81 aa11.64□□□□□ -0.55
UBXN1-202ENST00000301935 BAP18Q8IXM2 172 aa11.64□□□□□ -0.55
UBXN1-202ENST00000301935 GINS3Q9BRX5 216 aa11.64□□□□□ -0.55
UBXN1-202ENST00000301935 PEF1Q9UBV8 284 aaKnown RBP11.64□□□□□ -0.55
UBXN1-202ENST00000301935 IGHV3-48P01763 117 aa11.63□□□□□ -0.55
UBXN1-202ENST00000301935 LGALS1P09382 135 aaKnown RBP11.63□□□□□ -0.55
UBXN1-202ENST00000301935 IGLC1P0CG04 106 aa11.63□□□□□ -0.55
UBXN1-202ENST00000301935 RPL29P47914 159 aaKnown RBP11.63□□□□□ -0.55
UBXN1-202ENST00000301935 CAMLGP49069 296 aa11.63□□□□□ -0.55
UBXN1-202ENST00000301935 SERF2P84101 59 aa11.63□□□□□ -0.55
UBXN1-202ENST00000301935 RELQ04864 619 aaPredicted RBP11.63□□□□□ -0.55
UBXN1-202ENST00000301935 EGFEM1PQ0D2K5 195 aa11.63□□□□□ -0.55
UBXN1-202ENST00000301935 DEFB121Q5J5C9 76 aa11.63□□□□□ -0.55
UBXN1-202ENST00000301935 CLEC19AQ6UXS0 136 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 172.1 ms