RNA–Protein interactions for RNA: ENST00000297423.8

SPIDR-201, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPIDR, Length 3,988 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-201ENST00000297423 ZNF207O43670 478 aaKnown RBP12.21□□□□□ -0.45
SPIDR-201ENST00000297423 GFRA3O60609 400 aa12.21□□□□□ -0.45
SPIDR-201ENST00000297423 P01737 135 aa12.21□□□□□ -0.45
SPIDR-201ENST00000297423 B3GALT5-AS1P59052 145 aa12.21□□□□□ -0.45
SPIDR-201ENST00000297423 PAXXQ9BUH6 204 aa12.21□□□□□ -0.45
SPIDR-201ENST00000297423 TMEM177Q53S58 311 aa12.21□□□□□ -0.46
SPIDR-201ENST00000297423 WDR86Q86TI4 376 aa12.21□□□□□ -0.46
SPIDR-201ENST00000297423 SRSF6Q13247 344 aaKnown RBP12.2□□□□□ -0.46
SPIDR-201ENST00000297423 COL25A1Q9BXS0 654 aaPredicted RBP12.2□□□□□ -0.46
SPIDR-201ENST00000297423 COMMD5Q9GZQ3 224 aa12.2□□□□□ -0.46
SPIDR-201ENST00000297423 THYN1Q9P016 225 aa12.2□□□□□ -0.46
SPIDR-201ENST00000297423 PTPN13Q12923 2485 aa12.2□□□□□ -0.46
SPIDR-201ENST00000297423 HLA-DRB1P01911 266 aa12.2□□□□□ -0.46
SPIDR-201ENST00000297423 COL8A1P27658 744 aa12.2□□□□□ -0.46
SPIDR-201ENST00000297423 SRSF7Q16629 238 aaKnown RBP eCLIP12.2□□□□□ -0.46
SPIDR-201ENST00000297423 TEX45Q8NA69 505 aa12.2□□□□□ -0.46
SPIDR-201ENST00000297423 RAB1CQ92928 201 aa12.2□□□□□ -0.46
SPIDR-201ENST00000297423 PKIBQ9C010 78 aa12.2□□□□□ -0.46
SPIDR-201ENST00000297423 EXPH5Q8NEV8 1989 aa12.2□□□□□ -0.46
SPIDR-201ENST00000297423 TRGV5A0A0B4J1U4 118 aa12.2□□□□□ -0.46
SPIDR-201ENST00000297423 TOMM40O96008 361 aa12.2□□□□□ -0.46
SPIDR-201ENST00000297423 C8orf88P0DMB2 117 aa12.2□□□□□ -0.46
SPIDR-201ENST00000297423 KMT2EQ8IZD2 1858 aa12.2□□□□□ -0.46
SPIDR-201ENST00000297423 C9JCJ5 164 aa12.2□□□□□ -0.46
SPIDR-201ENST00000297423 SYS1-DBNDD2H3BUS1 97 aa12.2□□□□□ -0.46
SPIDR-201ENST00000297423 KLK10O43240 276 aa12.2□□□□□ -0.46
SPIDR-201ENST00000297423 REG1AP05451 166 aa12.2□□□□□ -0.46
SPIDR-201ENST00000297423 GCSHP23434 173 aa12.2□□□□□ -0.46
SPIDR-201ENST00000297423 SETD2Q9BYW2 2564 aaPredicted RBP12.19□□□□□ -0.46
SPIDR-201ENST00000297423 ENSAO43768 121 aaKnown RBP12.19□□□□□ -0.46
SPIDR-201ENST00000297423 OR10W1Q8NGF6 305 aa12.19□□□□□ -0.46
SPIDR-201ENST00000297423 OR4S2Q8NH73 311 aa12.19□□□□□ -0.46
SPIDR-201ENST00000297423 DUTP33316 252 aaKnown RBP12.19□□□□□ -0.46
SPIDR-201ENST00000297423 SMIM21Q3B7S5 101 aa12.19□□□□□ -0.46
SPIDR-201ENST00000297423 PRSS57Q6UWY2 283 aa12.19□□□□□ -0.46
SPIDR-201ENST00000297423 Q6ZSR3 168 aa12.19□□□□□ -0.46
SPIDR-201ENST00000297423 MPV17P39210 176 aa12.19□□□□□ -0.46
SPIDR-201ENST00000297423 BRWD1-AS2P59051 145 aa12.19□□□□□ -0.46
SPIDR-201ENST00000297423 SPATA12Q7Z6I5 190 aa12.19□□□□□ -0.46
SPIDR-201ENST00000297423 FDCSPQ8NFU4 85 aa12.19□□□□□ -0.46
SPIDR-201ENST00000297423 NAV3Q8IVL0 2385 aa12.18□□□□□ -0.46
SPIDR-201ENST00000297423 WDFY4Q6ZS81 3184 aa12.18□□□□□ -0.46
SPIDR-201ENST00000297423 TRAV17A0A0B4J275 112 aa12.18□□□□□ -0.46
SPIDR-201ENST00000297423 SAMD13Q5VXD3 122 aa12.18□□□□□ -0.46
SPIDR-201ENST00000297423 MTURNQ8N3F0 131 aa12.18□□□□□ -0.46
SPIDR-201ENST00000297423 FER1L6-AS1Q8NA97 138 aa12.18□□□□□ -0.46
SPIDR-201ENST00000297423 WFDC12Q8WWY7 111 aa12.18□□□□□ -0.46
SPIDR-201ENST00000297423 COQ2Q96H96 371 aa12.18□□□□□ -0.46
SPIDR-201ENST00000297423 ESDP10768 282 aa12.18□□□□□ -0.46
SPIDR-201ENST00000297423 HSPE1P61604 102 aaKnown RBP12.18□□□□□ -0.46
SPIDR-201ENST00000297423 FOXC1Q12948 553 aa12.18□□□□□ -0.46
SPIDR-201ENST00000297423 ZADH2Q8N4Q0 377 aa12.18□□□□□ -0.46
SPIDR-201ENST00000297423 PPP1R35Q8TAP8 253 aa12.18□□□□□ -0.46
SPIDR-201ENST00000297423 PERPQ96FX8 193 aa12.18□□□□□ -0.46
SPIDR-201ENST00000297423 SPCS1Q9Y6A9 102 aa12.18□□□□□ -0.46
SPIDR-201ENST00000297423 SPRY3O43610 288 aa12.17□□□□□ -0.46
SPIDR-201ENST00000297423 MOSP00540 346 aa12.17□□□□□ -0.46
SPIDR-201ENST00000297423 AREGP15514 252 aa12.17□□□□□ -0.46
SPIDR-201ENST00000297423 PDPNQ86YL7 162 aa12.17□□□□□ -0.46
SPIDR-201ENST00000297423 TMUB1Q9BVT8 246 aa12.17□□□□□ -0.46
SPIDR-201ENST00000297423 ZNRD1Q9P1U0 126 aa12.17□□□□□ -0.46
SPIDR-201ENST00000297423 PRDX2P32119 198 aa12.17□□□□□ -0.46
SPIDR-201ENST00000297423 HBBP68871 147 aa12.17□□□□□ -0.46
SPIDR-201ENST00000297423 C10orf113Q5VZT2 155 aa12.17□□□□□ -0.46
SPIDR-201ENST00000297423 COLCA1Q6ZS62 124 aa12.17□□□□□ -0.46
SPIDR-201ENST00000297423 SSUH2Q9Y2M2 353 aa12.17□□□□□ -0.46
SPIDR-201ENST00000297423 APOHP02749 345 aaPredicted RBP12.17□□□□□ -0.46
SPIDR-201ENST00000297423 PRNTQ86SH4 94 aa12.17□□□□□ -0.46
SPIDR-201ENST00000297423 NPIPB3Q92617 1050 aa12.17□□□□□ -0.46
SPIDR-201ENST00000297423 hADV38S2A0JD32 116 aa12.16□□□□□ -0.46
SPIDR-201ENST00000297423 SLC35E4Q6ICL7 350 aa12.16□□□□□ -0.46
SPIDR-201ENST00000297423 MDS2Q8NDY4 140 aa12.16□□□□□ -0.46
SPIDR-201ENST00000297423 OR10AG1Q8NH19 301 aa12.16□□□□□ -0.46
SPIDR-201ENST00000297423 TMEM186Q96B77 213 aa12.16□□□□□ -0.46
SPIDR-201ENST00000297423 A6NDN8 102 aa12.16□□□□□ -0.46
SPIDR-201ENST00000297423 TMEM97Q5BJF2 176 aa12.16□□□□□ -0.46
SPIDR-201ENST00000297423 Q6ZR03 302 aa12.16□□□□□ -0.46
SPIDR-201ENST00000297423 OR4F17Q8NGA8 305 aa12.16□□□□□ -0.46
SPIDR-201ENST00000297423 OR1L4Q8NGR5 311 aa12.16□□□□□ -0.46
SPIDR-201ENST00000297423 OR2K2Q8NGT1 345 aa12.16□□□□□ -0.46
SPIDR-201ENST00000297423 C18orf15Q96N68 181 aa12.16□□□□□ -0.46
SPIDR-201ENST00000297423 ST20Q9HBF5 79 aa12.16□□□□□ -0.46
SPIDR-201ENST00000297423 TRBV6-6A0A0A6YYG2 114 aa12.16□□□□□ -0.46
SPIDR-201ENST00000297423 PEX7O00628 323 aa12.16□□□□□ -0.46
SPIDR-201ENST00000297423 MORN5Q5VZ52 161 aa12.16□□□□□ -0.46
SPIDR-201ENST00000297423 TRAV8-1A0A0A6YYK1 113 aa12.15□□□□□ -0.46
SPIDR-201ENST00000297423 HCP5Q6MZN7 132 aa12.15□□□□□ -0.46
SPIDR-201ENST00000297423 ASCL5Q7RTU5 278 aa12.15□□□□□ -0.46
SPIDR-201ENST00000297423 KLF14Q8TD94 323 aaPredicted RBP12.15□□□□□ -0.46
SPIDR-201ENST00000297423 GRAMD2BQ96HH9 432 aa12.15□□□□□ -0.46
SPIDR-201ENST00000297423 SONP18583 2426 aaKnown RBP12.15□□□□□ -0.46
SPIDR-201ENST00000297423 MUC3AQ02505 3323 aa12.15□□□□□ -0.46
SPIDR-201ENST00000297423 TEX50A0A1B0GTY4 177 aa12.15□□□□□ -0.46
SPIDR-201ENST00000297423 GDF5OSQ5U4N7 250 aa12.15□□□□□ -0.46
SPIDR-201ENST00000297423 HSPB8Q9UJY1 196 aa12.15□□□□□ -0.46
SPIDR-201ENST00000297423 K7EMI3 77 aa12.15□□□□□ -0.46
SPIDR-201ENST00000297423 CIDEAO60543 219 aa12.15□□□□□ -0.46
SPIDR-201ENST00000297423 ERHP84090 104 aaKnown RBP12.15□□□□□ -0.46
SPIDR-201ENST00000297423 HES4Q9HCC6 221 aa12.15□□□□□ -0.46
SPIDR-201ENST00000297423 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms