RNA–Protein interactions for RNA: ENST00000297316.4

SOX17-201, Transcript of SRY-box 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOX17, Length 2,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX17-201ENST00000297316 CST9LP1Q5W188 147 aa16.97■□□□□ 0.31
SOX17-201ENST00000297316 PVRIGQ6DKI7 326 aa16.97■□□□□ 0.31
SOX17-201ENST00000297316 CCDC144NLQ6NUI1 221 aa16.97■□□□□ 0.31
SOX17-201ENST00000297316 DMRT1Q9Y5R6 373 aa16.97■□□□□ 0.31
SOX17-201ENST00000297316 B4DEV8 164 aa16.96■□□□□ 0.31
SOX17-201ENST00000297316 SRSF12Q8WXF0 261 aaKnown RBP16.96■□□□□ 0.31
SOX17-201ENST00000297316 MISP3Q96FF7 219 aa16.96■□□□□ 0.31
SOX17-201ENST00000297316 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.96■□□□□ 0.31
SOX17-201ENST00000297316 ZNF90Q03938 601 aa16.96■□□□□ 0.3
SOX17-201ENST00000297316 CYP2G1PQ6ZSU1 146 aa16.96■□□□□ 0.3
SOX17-201ENST00000297316 ZNF114Q8NC26 417 aa16.96■□□□□ 0.3
SOX17-201ENST00000297316 MAPK1IP1LQ8NDC0 245 aa16.96■□□□□ 0.3
SOX17-201ENST00000297316 OR2T10Q8NGZ9 312 aa16.96■□□□□ 0.3
SOX17-201ENST00000297316 TMEM37Q8WXS4 190 aa16.96■□□□□ 0.3
SOX17-201ENST00000297316 TBL2Q9Y4P3 447 aaKnown RBP16.96■□□□□ 0.3
SOX17-201ENST00000297316 YTHDF2Q9Y5A9 579 aaKnown RBP16.96■□□□□ 0.3
SOX17-201ENST00000297316 NAV2Q8IVL1 2488 aa16.95■□□□□ 0.3
SOX17-201ENST00000297316 IGHV3-21A0A0B4J1V1 117 aa16.95■□□□□ 0.3
SOX17-201ENST00000297316 NPFFO15130 113 aa16.95■□□□□ 0.3
SOX17-201ENST00000297316 FAM103A1Q9BTL3 118 aaKnown RBP16.95■□□□□ 0.3
SOX17-201ENST00000297316 FUT9Q9Y231 359 aa16.95■□□□□ 0.3
SOX17-201ENST00000297316 HIST1H2BKO60814 126 aa16.95■□□□□ 0.3
SOX17-201ENST00000297316 NDUFA3O95167 84 aa16.95■□□□□ 0.3
SOX17-201ENST00000297316 HIST1H2BJP06899 126 aa16.95■□□□□ 0.3
SOX17-201ENST00000297316 HIST1H2BOP23527 126 aa16.95■□□□□ 0.3
SOX17-201ENST00000297316 HIST1H2BBP33778 126 aa16.95■□□□□ 0.3
SOX17-201ENST00000297316 RND2P52198 227 aa16.95■□□□□ 0.3
SOX17-201ENST00000297316 HIST1H2BDP58876 126 aa16.95■□□□□ 0.3
SOX17-201ENST00000297316 HIST1H2BCP62807 126 aa16.95■□□□□ 0.3
SOX17-201ENST00000297316 HIST2H2BEQ16778 126 aa16.95■□□□□ 0.3
SOX17-201ENST00000297316 HIST2H2BFQ5QNW6 126 aaPredicted RBP16.95■□□□□ 0.3
SOX17-201ENST00000297316 BRD3OSQ6XYD6 125 aa16.95■□□□□ 0.3
SOX17-201ENST00000297316 NPBQ8NG41 125 aa16.95■□□□□ 0.3
SOX17-201ENST00000297316 HIST1H2BHQ93079 126 aa16.95■□□□□ 0.3
SOX17-201ENST00000297316 ZNF503Q96F45 646 aa16.95■□□□□ 0.3
SOX17-201ENST00000297316 HIST1H2BNQ99877 126 aa16.95■□□□□ 0.3
SOX17-201ENST00000297316 HIST1H2BMQ99879 126 aa16.95■□□□□ 0.3
SOX17-201ENST00000297316 SLC25A33Q9BSK2 321 aa16.95■□□□□ 0.3
SOX17-201ENST00000297316 TRAV20A0A0B4J274 112 aa16.94■□□□□ 0.3
SOX17-201ENST00000297316 PSMB11A5LHX3 300 aa16.94■□□□□ 0.3
SOX17-201ENST00000297316 OOSP1A8MZH6 123 aa16.94■□□□□ 0.3
SOX17-201ENST00000297316 TRGC2P03986 189 aa16.94■□□□□ 0.3
SOX17-201ENST00000297316 PNRC1Q12796 327 aaPredicted RBP16.94■□□□□ 0.3
SOX17-201ENST00000297316 MORN5Q5VZ52 161 aa16.94■□□□□ 0.3
SOX17-201ENST00000297316 SSX3Q99909 188 aa16.94■□□□□ 0.3
SOX17-201ENST00000297316 NAT8Q9UHE5 227 aa16.94■□□□□ 0.3
SOX17-201ENST00000297316 TRAV40A0A0B4J280 105 aa16.93■□□□□ 0.3
SOX17-201ENST00000297316 NCBP2LA6PVI3 153 aaKnown RBP16.93■□□□□ 0.3
SOX17-201ENST00000297316 CNIH1O95406 144 aa16.93■□□□□ 0.3
SOX17-201ENST00000297316 CRYGCP07315 174 aa16.93■□□□□ 0.3
SOX17-201ENST00000297316 Q8N6K4 173 aa16.93■□□□□ 0.3
SOX17-201ENST00000297316 DERL1Q9BUN8 251 aa16.93■□□□□ 0.3
SOX17-201ENST00000297316 SOX21Q9Y651 276 aaPredicted RBP16.93■□□□□ 0.3
SOX17-201ENST00000297316 MSMBP08118 114 aa16.93■□□□□ 0.3
SOX17-201ENST00000297316 THAP8Q8NA92 274 aa16.93■□□□□ 0.3
SOX17-201ENST00000297316 J3QKU1 62 aa16.92■□□□□ 0.3
SOX17-201ENST00000297316 OR5G3P0C626 314 aa16.92■□□□□ 0.3
SOX17-201ENST00000297316 TMEM11P17152 192 aa16.92■□□□□ 0.3
SOX17-201ENST00000297316 RPL23P62829 140 aaKnown RBP16.92■□□□□ 0.3
SOX17-201ENST00000297316 ADIRFQ15847 76 aa16.92■□□□□ 0.3
SOX17-201ENST00000297316 TMEM241Q24JQ0 296 aa16.92■□□□□ 0.3
SOX17-201ENST00000297316 C5orf64Q2M2E5 130 aa16.92■□□□□ 0.3
SOX17-201ENST00000297316 F11RQ9Y624 299 aaKnown RBP16.92■□□□□ 0.3
SOX17-201ENST00000297316 NDUFS6O75380 124 aaKnown RBP16.92■□□□□ 0.3
SOX17-201ENST00000297316 IGHV4-38-2P0DP08 117 aa16.92■□□□□ 0.3
SOX17-201ENST00000297316 OR1P1Q8NH06 330 aa16.92■□□□□ 0.3
SOX17-201ENST00000297316 FAM210BQ96KR6 192 aa16.92■□□□□ 0.3
SOX17-201ENST00000297316 TCRBV4S1A1TA0A5B7 111 aa16.91■□□□□ 0.3
SOX17-201ENST00000297316 CLDN34H7C241 214 aa16.91■□□□□ 0.3
SOX17-201ENST00000297316 DSCR9P59020 149 aa16.91■□□□□ 0.3
SOX17-201ENST00000297316 EBI3Q14213 229 aa16.91■□□□□ 0.3
SOX17-201ENST00000297316 PYY3Q5JQD4 70 aa16.91■□□□□ 0.3
SOX17-201ENST00000297316 TMEM242Q9NWH2 141 aa16.91■□□□□ 0.3
SOX17-201ENST00000297316 GAR1Q9NY12 217 aaKnown RBP16.91■□□□□ 0.3
SOX17-201ENST00000297316 CSPG4Q6UVK1 2322 aa16.91■□□□□ 0.3
SOX17-201ENST00000297316 A0A096LNT2 108 aa16.91■□□□□ 0.3
SOX17-201ENST00000297316 TRAV5A0A0B4J249 113 aa16.91■□□□□ 0.3
SOX17-201ENST00000297316 NDUFB4O95168 129 aa16.91■□□□□ 0.3
SOX17-201ENST00000297316 S100A2P29034 98 aa16.91■□□□□ 0.3
SOX17-201ENST00000297316 LURAP1LQ8IV03 231 aa16.91■□□□□ 0.3
SOX17-201ENST00000297316 LINC00469Q8N7U9 141 aa16.91■□□□□ 0.3
SOX17-201ENST00000297316 HIF1ANQ9NWT6 349 aa16.91■□□□□ 0.3
SOX17-201ENST00000297316 SCO2A0A1W2PP80 73 aa16.9■□□□□ 0.3
SOX17-201ENST00000297316 PDE6DO43924 150 aa16.9■□□□□ 0.3
SOX17-201ENST00000297316 FXYD3Q14802 87 aa16.9■□□□□ 0.3
SOX17-201ENST00000297316 PATE2Q6UY27 113 aa16.9■□□□□ 0.3
SOX17-201ENST00000297316 MRPL41Q8IXM3 137 aaKnown RBP16.9■□□□□ 0.3
SOX17-201ENST00000297316 C7orf69Q9H7B7 122 aa16.9■□□□□ 0.3
SOX17-201ENST00000297316 IGHV1-69DA0A0B4J2H0 117 aa16.9■□□□□ 0.3
SOX17-201ENST00000297316 AVPP01185 164 aa16.9■□□□□ 0.3
SOX17-201ENST00000297316 IGHV1-69P01742 117 aa16.9■□□□□ 0.3
SOX17-201ENST00000297316 NDPQ00604 133 aa16.9■□□□□ 0.3
SOX17-201ENST00000297316 FAM209BQ5JX69 171 aa16.9■□□□□ 0.3
SOX17-201ENST00000297316 GSX1Q9H4S2 264 aaPredicted RBP16.9■□□□□ 0.3
SOX17-201ENST00000297316 MT-CO2P00403 227 aa16.89■□□□□ 0.29
SOX17-201ENST00000297316 GFI1BQ5VTD9 330 aa16.89■□□□□ 0.29
SOX17-201ENST00000297316 SLC25A16P16260 332 aa16.88■□□□□ 0.29
SOX17-201ENST00000297316 FRZBQ92765 325 aa16.88■□□□□ 0.29
SOX17-201ENST00000297316 UHRF2Q96PU4 802 aa16.88■□□□□ 0.29
SOX17-201ENST00000297316 TECRQ9NZ01 308 aaKnown RBP16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms