RNA–Protein interactions for RNA: ENST00000296503.9

HMGB2-201, Transcript of high mobility group box 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB2, Length 1,889 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-201ENST00000296503 OR51H1Q8NH63 302 aa9.44□□□□□ -0.9
HMGB2-201ENST00000296503 CTDSP1Q9GZU7 261 aa9.44□□□□□ -0.9
HMGB2-201ENST00000296503 KLK15Q9H2R5 256 aa9.44□□□□□ -0.9
HMGB2-201ENST00000296503 FOXA2Q9Y261 457 aaPredicted RBP9.44□□□□□ -0.9
HMGB2-201ENST00000296503 ACTL6BO94805 426 aa9.43□□□□□ -0.9
HMGB2-201ENST00000296503 HRASP01112 189 aa9.43□□□□□ -0.9
HMGB2-201ENST00000296503 GCGP01275 180 aa9.43□□□□□ -0.9
HMGB2-201ENST00000296503 IGLV1-40P01703 118 aa9.43□□□□□ -0.9
HMGB2-201ENST00000296503 PRH1P02810 166 aa9.43□□□□□ -0.9
HMGB2-201ENST00000296503 SAA1P0DJI8 122 aaPredicted RBP9.43□□□□□ -0.9
HMGB2-201ENST00000296503 RAB9AP51151 201 aa9.43□□□□□ -0.9
HMGB2-201ENST00000296503 CRIP2P52943 208 aaPredicted RBP9.43□□□□□ -0.9
HMGB2-201ENST00000296503 UCP3P55916 312 aa9.43□□□□□ -0.9
HMGB2-201ENST00000296503 BRWD1-AS2P59051 145 aa9.43□□□□□ -0.9
HMGB2-201ENST00000296503 TMEM187Q14656 261 aa9.43□□□□□ -0.9
HMGB2-201ENST00000296503 TNXAQ16473 311 aa9.43□□□□□ -0.9
HMGB2-201ENST00000296503 PRSS8Q16651 343 aa9.43□□□□□ -0.9
HMGB2-201ENST00000296503 VKORC1L1Q8N0U8 176 aa9.43□□□□□ -0.9
HMGB2-201ENST00000296503 RNF152Q8N8N0 203 aa9.43□□□□□ -0.9
HMGB2-201ENST00000296503 NIPSNAP3BQ9BS92 247 aa9.43□□□□□ -0.9
HMGB2-201ENST00000296503 C11orf1Q9H5F2 150 aa9.43□□□□□ -0.9
HMGB2-201ENST00000296503 PUS1Q9Y606 427 aaKnown RBP eCLIP9.43□□□□□ -0.9
HMGB2-201ENST00000296503 SMCO3A2RU48 225 aa9.42□□□□□ -0.9
HMGB2-201ENST00000296503 ST8SIA3O43173 380 aa9.42□□□□□ -0.9
HMGB2-201ENST00000296503 CXCL1P09341 107 aa9.42□□□□□ -0.9
HMGB2-201ENST00000296503 OR13C7P0DN81 318 aa9.42□□□□□ -0.9
HMGB2-201ENST00000296503 DLK1P80370 383 aa9.42□□□□□ -0.9
HMGB2-201ENST00000296503 PMS2P11Q13670 270 aa9.42□□□□□ -0.9
HMGB2-201ENST00000296503 AKR1C8PQ5T2L2 129 aa9.42□□□□□ -0.9
HMGB2-201ENST00000296503 ZNF429Q86V71 674 aa9.42□□□□□ -0.9
HMGB2-201ENST00000296503 HSD17B11Q8NBQ5 300 aa9.42□□□□□ -0.9
HMGB2-201ENST00000296503 OR5T1Q8NG75 326 aa9.42□□□□□ -0.9
HMGB2-201ENST00000296503 GNPNAT1Q96EK6 184 aaPredicted RBP9.42□□□□□ -0.9
HMGB2-201ENST00000296503 MS4A10Q96PG2 267 aa9.42□□□□□ -0.9
HMGB2-201ENST00000296503 GPR61Q9BZJ8 451 aa9.42□□□□□ -0.9
HMGB2-201ENST00000296503 ZNF355PQ9NSJ1 428 aa9.42□□□□□ -0.9
HMGB2-201ENST00000296503 TCAPO15273 167 aa9.42□□□□□ -0.9
HMGB2-201ENST00000296503 RAMP3O60896 148 aa9.42□□□□□ -0.9
HMGB2-201ENST00000296503 PITX3O75364 302 aa9.42□□□□□ -0.9
HMGB2-201ENST00000296503 PGLYRP1O75594 196 aaPredicted RBP9.42□□□□□ -0.9
HMGB2-201ENST00000296503 SCAF4O95104 1147 aaKnown RBP9.42□□□□□ -0.9
HMGB2-201ENST00000296503 CDS2O95674 445 aa9.42□□□□□ -0.9
HMGB2-201ENST00000296503 S100GP29377 79 aa9.42□□□□□ -0.9
HMGB2-201ENST00000296503 MYCNOSP40205 109 aa9.42□□□□□ -0.9
HMGB2-201ENST00000296503 RND3P61587 244 aa9.42□□□□□ -0.9
HMGB2-201ENST00000296503 CDPF1Q6NVV7 123 aa9.42□□□□□ -0.9
HMGB2-201ENST00000296503 TMEM183AQ8IXX5 376 aa9.42□□□□□ -0.9
HMGB2-201ENST00000296503 MMD2Q8IY49 270 aa9.42□□□□□ -0.9
HMGB2-201ENST00000296503 ZNF491Q8N8L2 437 aa9.42□□□□□ -0.9
HMGB2-201ENST00000296503 VSTM2AQ8TAG5 236 aa9.42□□□□□ -0.9
HMGB2-201ENST00000296503 RHOVQ96L33 236 aa9.42□□□□□ -0.9
HMGB2-201ENST00000296503 DUX3Q96PT4 197 aa9.42□□□□□ -0.9
HMGB2-201ENST00000296503 SLC25A31Q9H0C2 315 aa9.42□□□□□ -0.9
HMGB2-201ENST00000296503 NAA60Q9H7X0 242 aa9.42□□□□□ -0.9
HMGB2-201ENST00000296503 ZNF430Q9H8G1 570 aaPredicted RBP9.42□□□□□ -0.9
HMGB2-201ENST00000296503 LSM5Q9Y4Y9 91 aaKnown RBP9.42□□□□□ -0.9
HMGB2-201ENST00000296503 CCL24O00175 119 aa9.41□□□□□ -0.9
HMGB2-201ENST00000296503 MPPED1O15442 326 aa9.41□□□□□ -0.9
HMGB2-201ENST00000296503 SOX15O60248 233 aa9.41□□□□□ -0.9
HMGB2-201ENST00000296503 HPRT1P00492 218 aa9.41□□□□□ -0.9
HMGB2-201ENST00000296503 TRGC1P0CF51 173 aa9.41□□□□□ -0.9
HMGB2-201ENST00000296503 APELAP0DMC3 54 aa9.41□□□□□ -0.9
HMGB2-201ENST00000296503 PI3P19957 117 aa9.41□□□□□ -0.9
HMGB2-201ENST00000296503 SRPXP78539 464 aa9.41□□□□□ -0.9
HMGB2-201ENST00000296503 SSBP2P81877 361 aaPredicted RBP9.41□□□□□ -0.9
HMGB2-201ENST00000296503 MRGPRG-AS1Q2M3A8 158 aa9.41□□□□□ -0.9
HMGB2-201ENST00000296503 PHLDA2Q53GA4 152 aa9.41□□□□□ -0.9
HMGB2-201ENST00000296503 C19orf54Q5BKX5 351 aa9.41□□□□□ -0.9
HMGB2-201ENST00000296503 LGI3Q8N145 548 aa9.41□□□□□ -0.9
HMGB2-201ENST00000296503 WFDC9Q8NEX5 89 aa9.41□□□□□ -0.9
HMGB2-201ENST00000296503 MISP3Q96FF7 219 aa9.41□□□□□ -0.9
HMGB2-201ENST00000296503 FAM210BQ96KR6 192 aa9.41□□□□□ -0.9
HMGB2-201ENST00000296503 UBE2E2Q96LR5 201 aa9.41□□□□□ -0.9
HMGB2-201ENST00000296503 PACRGQ96M98 296 aaPredicted RBP9.41□□□□□ -0.9
HMGB2-201ENST00000296503 OR5B12Q96R08 314 aa9.41□□□□□ -0.9
HMGB2-201ENST00000296503 HIST1H2BLQ99880 126 aa9.41□□□□□ -0.9
HMGB2-201ENST00000296503 PYGO2Q9BRQ0 406 aa9.41□□□□□ -0.9
HMGB2-201ENST00000296503 VAX2Q9UIW0 290 aa9.41□□□□□ -0.9
HMGB2-201ENST00000296503 NOTCH3Q9UM47 2321 aa9.4□□□□□ -0.9
HMGB2-201ENST00000296503 G3V4G9 280 aa9.4□□□□□ -0.9
HMGB2-201ENST00000296503 RBFOX2O43251 390 aaKnown RBP eCLIP9.4□□□□□ -0.91e-23■■■■□ 22.1
HMGB2-201ENST00000296503 TRGC2P03986 189 aa9.4□□□□□ -0.9
HMGB2-201ENST00000296503 RD3LP0DJH9 198 aa9.4□□□□□ -0.9
HMGB2-201ENST00000296503 ICAM4Q14773 271 aa9.4□□□□□ -0.9
HMGB2-201ENST00000296503 DEFB136Q30KP8 78 aa9.4□□□□□ -0.9
HMGB2-201ENST00000296503 OXLD1Q5BKU9 147 aa9.4□□□□□ -0.9
HMGB2-201ENST00000296503 MRPL41Q8IXM3 137 aaKnown RBP9.4□□□□□ -0.9
HMGB2-201ENST00000296503 OR4D5Q8NGN0 318 aa9.4□□□□□ -0.9
HMGB2-201ENST00000296503 RAX2Q96IS3 184 aa9.4□□□□□ -0.9
HMGB2-201ENST00000296503 P2RX4Q99571 388 aa9.4□□□□□ -0.9
HMGB2-201ENST00000296503 SMIM3Q9BZL3 60 aa9.4□□□□□ -0.9
HMGB2-201ENST00000296503 PRR13Q9NZ81 148 aa9.4□□□□□ -0.9
HMGB2-201ENST00000296503 TNCP24821 2201 aa9.4□□□□□ -0.9
HMGB2-201ENST00000296503 DUXBA0A1W2PPF3 345 aa9.4□□□□□ -0.91
HMGB2-201ENST00000296503 IGLL1P15814 213 aa9.4□□□□□ -0.91
HMGB2-201ENST00000296503 F2RP25116 425 aa9.4□□□□□ -0.91
HMGB2-201ENST00000296503 TPPP2P59282 170 aa9.4□□□□□ -0.91
HMGB2-201ENST00000296503 BAXQ07812 192 aa9.4□□□□□ -0.91
HMGB2-201ENST00000296503 FAM213BQ8TBF2 198 aa9.4□□□□□ -0.91
HMGB2-201ENST00000296503 TMEM167AQ8TBQ9 72 aa9.4□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 99.5 ms