RNA–Protein interactions for RNA: ENST00000288976.3

PTPDC1-201, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-201ENST00000288976 POU2AF1Q16633 256 aa6.79□□□□□ -1.32
PTPDC1-201ENST00000288976 RPL39P5Q59GN2 51 aa6.79□□□□□ -1.32
PTPDC1-201ENST00000288976 FAM53AQ6NSI3 398 aaPredicted RBP6.79□□□□□ -1.32
PTPDC1-201ENST00000288976 AJUBAQ96IF1 538 aa6.79□□□□□ -1.32
PTPDC1-201ENST00000288976 NABP2Q9BQ15 211 aa6.79□□□□□ -1.32
PTPDC1-201ENST00000288976 PDZD2O15018 2839 aa6.79□□□□□ -1.32
PTPDC1-201ENST00000288976 SNCGO76070 127 aa6.79□□□□□ -1.32
PTPDC1-201ENST00000288976 IL4P05112 153 aa6.79□□□□□ -1.32
PTPDC1-201ENST00000288976 HIST1H1EP10412 219 aaKnown RBP6.79□□□□□ -1.32
PTPDC1-201ENST00000288976 TMEM177Q53S58 311 aa6.79□□□□□ -1.32
PTPDC1-201ENST00000288976 C10orf113Q5VZT2 155 aa6.79□□□□□ -1.32
PTPDC1-201ENST00000288976 PRNTQ86SH4 94 aa6.79□□□□□ -1.32
PTPDC1-201ENST00000288976 TP53RKQ96S44 253 aa6.79□□□□□ -1.32
PTPDC1-201ENST00000288976 MEGF9Q9H1U4 602 aa6.79□□□□□ -1.32
PTPDC1-201ENST00000288976 LRBAP50851 2863 aa6.79□□□□□ -1.32
PTPDC1-201ENST00000288976 IGHV1-3A0A0C4DH29 117 aa6.79□□□□□ -1.32
PTPDC1-201ENST00000288976 GPX1P07203 203 aa6.79□□□□□ -1.32
PTPDC1-201ENST00000288976 SNRPD3P62318 126 aaKnown RBP6.79□□□□□ -1.32
PTPDC1-201ENST00000288976 KRTAP1-1Q07627 177 aa6.79□□□□□ -1.32
PTPDC1-201ENST00000288976 SELENOHQ8IZQ5 122 aaKnown RBP6.79□□□□□ -1.32
PTPDC1-201ENST00000288976 OSR1Q8TAX0 266 aaPredicted RBP6.79□□□□□ -1.32
PTPDC1-201ENST00000288976 MRPL20Q9BYC9 149 aaKnown RBP6.79□□□□□ -1.32
PTPDC1-201ENST00000288976 CDC42EP3Q9UKI2 254 aa6.79□□□□□ -1.32
PTPDC1-201ENST00000288976 DCHS2Q6V1P9 2916 aa6.78□□□□□ -1.32
PTPDC1-201ENST00000288976 LINC00473A8K010 186 aa6.78□□□□□ -1.32
PTPDC1-201ENST00000288976 PROP1O75360 226 aa6.78□□□□□ -1.32
PTPDC1-201ENST00000288976 MOSP00540 346 aa6.78□□□□□ -1.32
PTPDC1-201ENST00000288976 GNG4P50150 75 aa6.78□□□□□ -1.32
PTPDC1-201ENST00000288976 EBI3Q14213 229 aa6.78□□□□□ -1.32
PTPDC1-201ENST00000288976 C1orf229Q6ZS94 237 aaPredicted RBP6.78□□□□□ -1.32
PTPDC1-201ENST00000288976 ZNF383Q8NA42 475 aa6.78□□□□□ -1.32
PTPDC1-201ENST00000288976 SLC24A4Q8NFF2 622 aa6.78□□□□□ -1.32
PTPDC1-201ENST00000288976 NAT8BQ9UHF3 227 aa6.78□□□□□ -1.32
PTPDC1-201ENST00000288976 FBXL7Q9UJT9 491 aa6.78□□□□□ -1.32
PTPDC1-201ENST00000288976 A0A1W2PPI3 338 aa6.78□□□□□ -1.32
PTPDC1-201ENST00000288976 SULT1A1P50225 295 aa6.78□□□□□ -1.32
PTPDC1-201ENST00000288976 KLRD1Q13241 179 aa6.78□□□□□ -1.32
PTPDC1-201ENST00000288976 TMUB2Q71RG4 321 aa6.78□□□□□ -1.32
PTPDC1-201ENST00000288976 SLC25A33Q9BSK2 321 aa6.78□□□□□ -1.32
PTPDC1-201ENST00000288976 PRDM13Q9H4Q3 707 aa6.78□□□□□ -1.32
PTPDC1-201ENST00000288976 AMY1AP04745 511 aa6.78□□□□□ -1.32
PTPDC1-201ENST00000288976 GIPP09681 153 aaPredicted RBP6.78□□□□□ -1.32
PTPDC1-201ENST00000288976 PMCHP20382 165 aa6.78□□□□□ -1.32
PTPDC1-201ENST00000288976 PTTG1IPP53801 180 aa6.78□□□□□ -1.32
PTPDC1-201ENST00000288976 SVBPQ8N300 66 aa6.78□□□□□ -1.32
PTPDC1-201ENST00000288976 TMEM37Q8WXS4 190 aa6.78□□□□□ -1.32
PTPDC1-201ENST00000288976 NPIPB3Q92617 1050 aa6.78□□□□□ -1.32
PTPDC1-201ENST00000288976 TECRQ9NZ01 308 aaKnown RBP6.78□□□□□ -1.32
PTPDC1-201ENST00000288976 P0C879 139 aa6.78□□□□□ -1.32
PTPDC1-201ENST00000288976 ZNF585BQ52M93 769 aa6.78□□□□□ -1.32
PTPDC1-201ENST00000288976 STPG3Q8N7X2 389 aa6.78□□□□□ -1.32
PTPDC1-201ENST00000288976 CFHR4Q92496 578 aa6.78□□□□□ -1.32
PTPDC1-201ENST00000288976 MIEN1Q9BRT3 115 aa6.78□□□□□ -1.32
PTPDC1-201ENST00000288976 HIGD1AQ9Y241 93 aa6.78□□□□□ -1.32
PTPDC1-201ENST00000288976 OR2T8A6NH00 312 aa6.77□□□□□ -1.33
PTPDC1-201ENST00000288976 MSGN1A6NI15 193 aa6.77□□□□□ -1.33
PTPDC1-201ENST00000288976 RNASE1P07998 156 aaKnown RBP6.77□□□□□ -1.33
PTPDC1-201ENST00000288976 OR5AL1P0C617 328 aa6.77□□□□□ -1.33
PTPDC1-201ENST00000288976 SAA4P35542 130 aa6.77□□□□□ -1.33
PTPDC1-201ENST00000288976 C19orf54Q5BKX5 351 aa6.77□□□□□ -1.33
PTPDC1-201ENST00000288976 A0A0G2JLM5 398 aa6.77□□□□□ -1.33
PTPDC1-201ENST00000288976 HKR1P10072 659 aa6.77□□□□□ -1.33
PTPDC1-201ENST00000288976 MEOX2P50222 304 aa6.77□□□□□ -1.33
PTPDC1-201ENST00000288976 BRWD1-AS2P59051 145 aa6.77□□□□□ -1.33
PTPDC1-201ENST00000288976 KLK15Q9H2R5 256 aa6.77□□□□□ -1.33
PTPDC1-201ENST00000288976 UBE2L6O14933 153 aa6.77□□□□□ -1.33
PTPDC1-201ENST00000288976 IL6RP08887 468 aaPredicted RBP6.77□□□□□ -1.33
PTPDC1-201ENST00000288976 RPL35AP18077 110 aaKnown RBP6.77□□□□□ -1.33
PTPDC1-201ENST00000288976 RNASEKQ6P5S7 137 aaKnown RBP6.77□□□□□ -1.33
PTPDC1-201ENST00000288976 PPP1R27Q86WC6 154 aa6.77□□□□□ -1.33
PTPDC1-201ENST00000288976 TMEM116Q8NCL8 245 aa6.77□□□□□ -1.33
PTPDC1-201ENST00000288976 NPBQ8NG41 125 aa6.77□□□□□ -1.33
PTPDC1-201ENST00000288976 MMP24Q9Y5R2 645 aa6.77□□□□□ -1.33
PTPDC1-201ENST00000288976 ANKRD17O75179 2603 aaKnown RBP6.77□□□□□ -1.33
PTPDC1-201ENST00000288976 APCP25054 2843 aa6.77□□□□□ -1.33
PTPDC1-201ENST00000288976 KLF17Q5JT82 389 aaPredicted RBP6.76□□□□□ -1.33
PTPDC1-201ENST00000288976 MRPL54Q6P161 138 aaKnown RBP6.76□□□□□ -1.33
PTPDC1-201ENST00000288976 TEPPQ6URK8 271 aa6.76□□□□□ -1.33
PTPDC1-201ENST00000288976 CIARTQ8N365 385 aaPredicted RBP6.76□□□□□ -1.33
PTPDC1-201ENST00000288976 Q8N6K4 173 aa6.76□□□□□ -1.33
PTPDC1-201ENST00000288976 LHFPL5Q8TAF8 219 aa6.76□□□□□ -1.33
PTPDC1-201ENST00000288976 BET1LQ9NYM9 111 aa6.76□□□□□ -1.33
PTPDC1-201ENST00000288976 OR2A4O95047 310 aa6.76□□□□□ -1.33
PTPDC1-201ENST00000288976 S100A8P05109 93 aa6.76□□□□□ -1.33
PTPDC1-201ENST00000288976 NMSQ5H8A3 153 aa6.76□□□□□ -1.33
PTPDC1-201ENST00000288976 LCNL1Q6ZST4 164 aa6.76□□□□□ -1.33
PTPDC1-201ENST00000288976 PUSL1Q8N0Z8 303 aaKnown RBP6.76□□□□□ -1.33
PTPDC1-201ENST00000288976 OR2D3Q8NGH3 330 aa6.76□□□□□ -1.33
PTPDC1-201ENST00000288976 MARC2Q969Z3 335 aa6.76□□□□□ -1.33
PTPDC1-201ENST00000288976 OR2A7Q96R45 310 aa6.76□□□□□ -1.33
PTPDC1-201ENST00000288976 LINC01587Q99440 93 aa6.76□□□□□ -1.33
PTPDC1-201ENST00000288976 QTRT1Q9BXR0 403 aaKnown RBP6.76□□□□□ -1.33
PTPDC1-201ENST00000288976 MUC21A0A0G2JKD1 596 aa6.76□□□□□ -1.33
PTPDC1-201ENST00000288976 MUC21A0A140T8X8 626 aa6.76□□□□□ -1.33
PTPDC1-201ENST00000288976 KRTDAPP60985 99 aa6.76□□□□□ -1.33
PTPDC1-201ENST00000288976 NHLH2Q02577 135 aa6.76□□□□□ -1.33
PTPDC1-201ENST00000288976 MUC21Q5SSG8 566 aa6.76□□□□□ -1.33
PTPDC1-201ENST00000288976 GTSCR1Q86UQ5 136 aa6.76□□□□□ -1.33
PTPDC1-201ENST00000288976 PHLDA3Q9Y5J5 127 aa6.76□□□□□ -1.33
PTPDC1-201ENST00000288976 FAM90A26D6RGX4 464 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms