RNA–Protein interactions for RNA: ENST00000288840.9

SMAD6-201, Transcript of SMAD family member 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD6, Length 3,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-201ENST00000288840 FOXA2Q9Y261 457 aaPredicted RBP12.96□□□□□ -0.34
SMAD6-201ENST00000288840 ADIPOQQ15848 244 aa12.95□□□□□ -0.34
SMAD6-201ENST00000288840 OR52E5Q8NH55 327 aa12.95□□□□□ -0.34
SMAD6-201ENST00000288840 OSR1Q8TAX0 266 aaPredicted RBP12.95□□□□□ -0.34
SMAD6-201ENST00000288840 RASL11BQ9BPW5 248 aa12.95□□□□□ -0.34
SMAD6-201ENST00000288840 PERPQ96FX8 193 aa12.95□□□□□ -0.34
SMAD6-201ENST00000288840 NEU1Q99519 415 aa12.95□□□□□ -0.34
SMAD6-201ENST00000288840 C16orf54Q6UWD8 224 aa12.95□□□□□ -0.34
SMAD6-201ENST00000288840 YPEL4Q96NS1 127 aa12.95□□□□□ -0.34
SMAD6-201ENST00000288840 KMT2EQ8IZD2 1858 aa12.94□□□□□ -0.34
SMAD6-201ENST00000288840 TMEM177Q53S58 311 aa12.94□□□□□ -0.34
SMAD6-201ENST00000288840 PARD6GQ9BYG4 376 aaPredicted RBP12.94□□□□□ -0.34
SMAD6-201ENST00000288840 HSBP1L1C9JCN9 74 aa12.94□□□□□ -0.34
SMAD6-201ENST00000288840 K7EN84 100 aa12.94□□□□□ -0.34
SMAD6-201ENST00000288840 NBEAP1P0C6P0 100 aa12.94□□□□□ -0.34
SMAD6-201ENST00000288840 CNTFRP26992 372 aa12.94□□□□□ -0.34
SMAD6-201ENST00000288840 GOLT1AQ6ZVE7 132 aa12.94□□□□□ -0.34
SMAD6-201ENST00000288840 ST6GALNAC6Q969X2 333 aa12.94□□□□□ -0.34
SMAD6-201ENST00000288840 IGHV3OR16-13A0A075B7E8 117 aa12.94□□□□□ -0.34
SMAD6-201ENST00000288840 TRAV8-1A0A0A6YYK1 113 aa12.94□□□□□ -0.34
SMAD6-201ENST00000288840 IGHV3-74A0A0B4J1X5 117 aa12.94□□□□□ -0.34
SMAD6-201ENST00000288840 A6NNC1 897 aa12.94□□□□□ -0.34
SMAD6-201ENST00000288840 CCL21O00585 134 aa12.94□□□□□ -0.34
SMAD6-201ENST00000288840 AREGP15514 252 aa12.94□□□□□ -0.34
SMAD6-201ENST00000288840 TFPI2P48307 235 aa12.94□□□□□ -0.34
SMAD6-201ENST00000288840 PMCHL1Q16048 86 aa12.94□□□□□ -0.34
SMAD6-201ENST00000288840 KLF17Q5JT82 389 aaPredicted RBP12.94□□□□□ -0.34
SMAD6-201ENST00000288840 MORN5Q5VZ52 161 aa12.94□□□□□ -0.34
SMAD6-201ENST00000288840 TMEM14BQ9NUH8 114 aa12.94□□□□□ -0.34
SMAD6-201ENST00000288840 DSCAMO60469 2012 aa12.93□□□□□ -0.34
SMAD6-201ENST00000288840 EREGO14944 169 aa12.93□□□□□ -0.34
SMAD6-201ENST00000288840 CDKN1AP38936 164 aa12.93□□□□□ -0.34
SMAD6-201ENST00000288840 TAS2R60P59551 318 aa12.93□□□□□ -0.34
SMAD6-201ENST00000288840 PPIAL4CA0A0B4J2A2 164 aa12.93□□□□□ -0.34
SMAD6-201ENST00000288840 GGTLC3B5MD39 225 aa12.93□□□□□ -0.34
SMAD6-201ENST00000288840 ISLRO14498 428 aa12.93□□□□□ -0.34
SMAD6-201ENST00000288840 PPIAL4GP0DN37 164 aa12.93□□□□□ -0.34
SMAD6-201ENST00000288840 RNASE2P10153 161 aaKnown RBP12.93□□□□□ -0.34
SMAD6-201ENST00000288840 HTR1DP28221 377 aa12.93□□□□□ -0.34
SMAD6-201ENST00000288840 LCN12Q6JVE5 192 aa12.93□□□□□ -0.34
SMAD6-201ENST00000288840 NDUFAF3Q9BU61 184 aa12.93□□□□□ -0.34
SMAD6-201ENST00000288840 M0QZ24 198 aa12.93□□□□□ -0.34
SMAD6-201ENST00000288840 CT45A10P0DMU9 189 aa12.93□□□□□ -0.34
SMAD6-201ENST00000288840 FOXL1Q12952 345 aa12.93□□□□□ -0.34
SMAD6-201ENST00000288840 SPATA45Q537H7 98 aa12.93□□□□□ -0.34
SMAD6-201ENST00000288840 SLC25A48Q6ZT89 311 aaKnown RBP12.93□□□□□ -0.34
SMAD6-201ENST00000288840 HIGD1CA8MV81 97 aa12.92□□□□□ -0.34
SMAD6-201ENST00000288840 PEX7O00628 323 aa12.92□□□□□ -0.34
SMAD6-201ENST00000288840 MAS1LP35410 378 aa12.92□□□□□ -0.34
SMAD6-201ENST00000288840 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.92□□□□□ -0.34
SMAD6-201ENST00000288840 RAB1CQ92928 201 aa12.92□□□□□ -0.34
SMAD6-201ENST00000288840 RNASE6Q93091 150 aaKnown RBP12.92□□□□□ -0.34
SMAD6-201ENST00000288840 TIMD4Q96H15 378 aa12.92□□□□□ -0.34
SMAD6-201ENST00000288840 E7EUB6 86 aa12.92□□□□□ -0.34
SMAD6-201ENST00000288840 PAFAH1B2P68402 229 aa12.92□□□□□ -0.34
SMAD6-201ENST00000288840 TMEM186Q96B77 213 aa12.92□□□□□ -0.34
SMAD6-201ENST00000288840 DYSFO75923 2080 aa12.92□□□□□ -0.34
SMAD6-201ENST00000288840 LOC102724200A0A096LPH7 203 aaPredicted RBP12.92□□□□□ -0.34
SMAD6-201ENST00000288840 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.92□□□□□ -0.34
SMAD6-201ENST00000288840 H0YJW9 148 aa12.92□□□□□ -0.34
SMAD6-201ENST00000288840 GNG7O60262 68 aa12.92□□□□□ -0.34
SMAD6-201ENST00000288840 HIST1H1EP10412 219 aaKnown RBP12.92□□□□□ -0.34
SMAD6-201ENST00000288840 HINT1P49773 126 aaPredicted RBP12.92□□□□□ -0.34
SMAD6-201ENST00000288840 Q6ZS92 163 aa12.92□□□□□ -0.34
SMAD6-201ENST00000288840 ERASQ7Z444 233 aa12.92□□□□□ -0.34
SMAD6-201ENST00000288840 CENPVQ7Z7K6 275 aaPredicted RBP12.92□□□□□ -0.34
SMAD6-201ENST00000288840 DMRTC2Q8IXT2 367 aaPredicted RBP12.92□□□□□ -0.34
SMAD6-201ENST00000288840 MUC15Q8N387 334 aa12.92□□□□□ -0.34
SMAD6-201ENST00000288840 OR5R1Q8NH85 324 aa12.92□□□□□ -0.34
SMAD6-201ENST00000288840 IGKV1OR2-108A0A075B7D4 117 aa12.91□□□□□ -0.34
SMAD6-201ENST00000288840 TM4SF5O14894 197 aa12.91□□□□□ -0.34
SMAD6-201ENST00000288840 FCGR2BP31994 310 aaPredicted RBP12.91□□□□□ -0.34
SMAD6-201ENST00000288840 TDRG1Q3Y452 100 aa12.91□□□□□ -0.34
SMAD6-201ENST00000288840 NRN1Q9NPD7 142 aa12.91□□□□□ -0.34
SMAD6-201ENST00000288840 RNF24Q9Y225 148 aa12.91□□□□□ -0.34
SMAD6-201ENST00000288840 CFAP47Q6ZTR5 3102 aa12.91□□□□□ -0.34
SMAD6-201ENST00000288840 LOC389332A0A1B0GUA5 103 aa12.91□□□□□ -0.34
SMAD6-201ENST00000288840 PPOXP50336 477 aa12.91□□□□□ -0.34
SMAD6-201ENST00000288840 PMCHL2Q9BQD1 86 aa12.91□□□□□ -0.34
SMAD6-201ENST00000288840 P0C879 139 aa12.91□□□□□ -0.34
SMAD6-201ENST00000288840 BTF3P20290 206 aaKnown RBP12.91□□□□□ -0.34
SMAD6-201ENST00000288840 HIGD1AQ9Y241 93 aa12.91□□□□□ -0.34
SMAD6-201ENST00000288840 AMY1AP04745 511 aa12.9□□□□□ -0.34
SMAD6-201ENST00000288840 WT1-ASQ06250 92 aa12.9□□□□□ -0.34
SMAD6-201ENST00000288840 OR4F17Q8NGA8 305 aa12.9□□□□□ -0.34
SMAD6-201ENST00000288840 FAM168AQ92567 244 aa12.9□□□□□ -0.34
SMAD6-201ENST00000288840 HLA-DQA1P01909 254 aa12.9□□□□□ -0.34
SMAD6-201ENST00000288840 CD99P14209 185 aa12.9□□□□□ -0.34
SMAD6-201ENST00000288840 MC5RP33032 325 aa12.9□□□□□ -0.34
SMAD6-201ENST00000288840 MCRIP2Q9BUT9 160 aaKnown RBP12.9□□□□□ -0.34
SMAD6-201ENST00000288840 ADGRG4Q8IZF6 3080 aa12.9□□□□□ -0.34
SMAD6-201ENST00000288840 A8MWP6 167 aa12.9□□□□□ -0.34
SMAD6-201ENST00000288840 TMEM178BH3BS89 294 aa12.9□□□□□ -0.34
SMAD6-201ENST00000288840 CORTO00230 105 aa12.9□□□□□ -0.34
SMAD6-201ENST00000288840 J3KRW8 73 aa12.89□□□□□ -0.35
SMAD6-201ENST00000288840 K7EQM0 130 aa12.89□□□□□ -0.35
SMAD6-201ENST00000288840 SELENOTP62341 195 aa12.89□□□□□ -0.35
SMAD6-201ENST00000288840 EXOC3-AS1Q8N2X6 119 aa12.89□□□□□ -0.35
SMAD6-201ENST00000288840 RNF2Q99496 336 aa12.89□□□□□ -0.35
SMAD6-201ENST00000288840 VPS25Q9BRG1 176 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms