RNA–Protein interactions for RNA: ENST00000284637.13

SH3RF1-201, Transcript of SH3 domain containing ring finger 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3RF1, Length 5,272 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-201ENST00000284637 WNK2Q9Y3S1 2297 aa13.7□□□□□ -0.22
SH3RF1-201ENST00000284637 CEACAM4O75871 244 aa13.7□□□□□ -0.22
SH3RF1-201ENST00000284637 TRGV3P03979 118 aa13.7□□□□□ -0.22
SH3RF1-201ENST00000284637 RPP25LQ8N5L8 163 aaKnown RBP13.7□□□□□ -0.22
SH3RF1-201ENST00000284637 SIPA1L1O43166 1804 aa13.7□□□□□ -0.22
SH3RF1-201ENST00000284637 A0A1W2PRE2 83 aa13.7□□□□□ -0.22
SH3RF1-201ENST00000284637 CDKN1BP46527 198 aa13.7□□□□□ -0.22
SH3RF1-201ENST00000284637 LHX2P50458 406 aa13.7□□□□□ -0.22
SH3RF1-201ENST00000284637 SUMO2P61956 95 aaKnown RBP13.7□□□□□ -0.22
SH3RF1-201ENST00000284637 NAA38Q9BRA0 125 aaKnown RBP13.7□□□□□ -0.22
SH3RF1-201ENST00000284637 CADP27708 2225 aa13.69□□□□□ -0.22
SH3RF1-201ENST00000284637 PATJQ8NI35 1801 aa13.69□□□□□ -0.22
SH3RF1-201ENST00000284637 YPEL1O60688 119 aa13.69□□□□□ -0.22
SH3RF1-201ENST00000284637 PAPPA-AS1Q5QFB9 102 aa13.69□□□□□ -0.22
SH3RF1-201ENST00000284637 MRAP2Q96G30 205 aa13.69□□□□□ -0.22
SH3RF1-201ENST00000284637 YPEL2Q96QA6 119 aa13.69□□□□□ -0.22
SH3RF1-201ENST00000284637 GAGE2BQ13066 116 aa13.69□□□□□ -0.22
SH3RF1-201ENST00000284637 GAGE2EQ4V326 116 aa13.69□□□□□ -0.22
SH3RF1-201ENST00000284637 Q6AWC8 147 aa13.69□□□□□ -0.22
SH3RF1-201ENST00000284637 C5orf24Q7Z6I8 188 aa13.69□□□□□ -0.22
SH3RF1-201ENST00000284637 RAX2Q96IS3 184 aa13.69□□□□□ -0.22
SH3RF1-201ENST00000284637 GAGE2DQ9UEU5 116 aa13.69□□□□□ -0.22
SH3RF1-201ENST00000284637 BRCA1P38398 1863 aaKnown RBP13.69□□□□□ -0.22
SH3RF1-201ENST00000284637 DIDO1Q9BTC0 2240 aaKnown RBP13.69□□□□□ -0.22
SH3RF1-201ENST00000284637 PRR31Q5SQ13 230 aa13.69□□□□□ -0.22
SH3RF1-201ENST00000284637 CRIM1Q9NZV1 1036 aa13.69□□□□□ -0.22
SH3RF1-201ENST00000284637 EPDR1Q9UM22 224 aa13.69□□□□□ -0.22
SH3RF1-201ENST00000284637 TNS1Q9HBL0 1735 aaKnown RBP13.69□□□□□ -0.22
SH3RF1-201ENST00000284637 ASIPP42127 132 aa13.69□□□□□ -0.22
SH3RF1-201ENST00000284637 PRDM6Q9NQX0 595 aa13.69□□□□□ -0.22
SH3RF1-201ENST00000284637 IGKV1-27A0A075B6S5 117 aa13.68□□□□□ -0.22
SH3RF1-201ENST00000284637 SP9P0CG40 484 aa13.68□□□□□ -0.22
SH3RF1-201ENST00000284637 LEPP41159 167 aa13.68□□□□□ -0.22
SH3RF1-201ENST00000284637 LINC00312Q9Y6C7 94 aa13.68□□□□□ -0.22
SH3RF1-201ENST00000284637 APOBEC3AP31941 199 aaPredicted RBP13.68□□□□□ -0.22
SH3RF1-201ENST00000284637 DUTP33316 252 aaKnown RBP13.68□□□□□ -0.22
SH3RF1-201ENST00000284637 MRPL27Q9P0M9 148 aaKnown RBP13.68□□□□□ -0.22
SH3RF1-201ENST00000284637 CRYGSP22914 178 aa13.68□□□□□ -0.22
SH3RF1-201ENST00000284637 SELENOKQ9Y6D0 94 aa13.68□□□□□ -0.22
SH3RF1-201ENST00000284637 DOCK10Q96BY6 2186 aa13.68□□□□□ -0.22
SH3RF1-201ENST00000284637 A0A087X0K7 114 aa13.68□□□□□ -0.22
SH3RF1-201ENST00000284637 C5orf63A6NC05 138 aa13.68□□□□□ -0.22
SH3RF1-201ENST00000284637 IGLV3-19P01714 112 aa13.68□□□□□ -0.22
SH3RF1-201ENST00000284637 FOXG1P55316 489 aaPredicted RBP13.68□□□□□ -0.22
SH3RF1-201ENST00000284637 C9orf106Q8NAJ2 232 aa13.68□□□□□ -0.22
SH3RF1-201ENST00000284637 IGLC2P0DOY2 106 aa13.67□□□□□ -0.22
SH3RF1-201ENST00000284637 IGLC3P0DOY3 106 aa13.67□□□□□ -0.22
SH3RF1-201ENST00000284637 SNRPD3P62318 126 aaKnown RBP13.67□□□□□ -0.22
SH3RF1-201ENST00000284637 BSPH1Q075Z2 132 aa13.67□□□□□ -0.22
SH3RF1-201ENST00000284637 ZCCHC24Q8N2G6 241 aaKnown RBP13.67□□□□□ -0.22
SH3RF1-201ENST00000284637 PDCD11Q14690 1871 aaKnown RBP13.67□□□□□ -0.22
SH3RF1-201ENST00000284637 KIAA2026Q5HYC2 2103 aa13.67□□□□□ -0.22
SH3RF1-201ENST00000284637 PRR19A6NJB7 356 aa13.67□□□□□ -0.22
SH3RF1-201ENST00000284637 C1orf162Q8NEQ5 155 aaPredicted RBP13.67□□□□□ -0.22
SH3RF1-201ENST00000284637 MOB4Q9Y3A3 225 aa13.67□□□□□ -0.22
SH3RF1-201ENST00000284637 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.67□□□□□ -0.22
SH3RF1-201ENST00000284637 ATP5L2Q7Z4Y8 100 aa13.67□□□□□ -0.22
SH3RF1-201ENST00000284637 ZIC4Q8N9L1 334 aa13.67□□□□□ -0.22
SH3RF1-201ENST00000284637 DUX5Q96PT3 197 aa13.67□□□□□ -0.22
SH3RF1-201ENST00000284637 TREML4Q6UXN2 200 aa13.67□□□□□ -0.22
SH3RF1-201ENST00000284637 LHFPL4Q7Z7J7 247 aa13.67□□□□□ -0.22
SH3RF1-201ENST00000284637 OTORQ9NRC9 128 aa13.67□□□□□ -0.22
SH3RF1-201ENST00000284637 NBASA2RRP1 2371 aa13.66□□□□□ -0.22
SH3RF1-201ENST00000284637 SPTAN1Q13813 2472 aaKnown RBP13.66□□□□□ -0.22
SH3RF1-201ENST00000284637 IGLV3-32A0A0A0MS00 114 aa13.66□□□□□ -0.22
SH3RF1-201ENST00000284637 TRAV5A0A0B4J249 113 aa13.66□□□□□ -0.22
SH3RF1-201ENST00000284637 EFEMP2O95967 443 aa13.66□□□□□ -0.22
SH3RF1-201ENST00000284637 Q0VG73 95 aa13.66□□□□□ -0.22
SH3RF1-201ENST00000284637 DMRTC2Q8IXT2 367 aaPredicted RBP13.66□□□□□ -0.22
SH3RF1-201ENST00000284637 OR13C6PQ8NH95 151 aa13.66□□□□□ -0.22
SH3RF1-201ENST00000284637 CASP8AP2Q9UKL3 1982 aa13.66□□□□□ -0.22
SH3RF1-201ENST00000284637 RIF1Q5UIP0 2472 aaKnown RBP13.66□□□□□ -0.22
SH3RF1-201ENST00000284637 UCNP55089 124 aa13.66□□□□□ -0.22
SH3RF1-201ENST00000284637 FAM71F2Q6NXP2 309 aa13.66□□□□□ -0.22
SH3RF1-201ENST00000284637 RASL11AQ6T310 242 aa13.66□□□□□ -0.22
SH3RF1-201ENST00000284637 LCTP09848 1927 aa13.66□□□□□ -0.22
SH3RF1-201ENST00000284637 DNAL4O96015 105 aa13.66□□□□□ -0.22
SH3RF1-201ENST00000284637 CD69Q07108 199 aa13.66□□□□□ -0.22
SH3RF1-201ENST00000284637 CLEC19AQ6UXS0 136 aa13.66□□□□□ -0.22
SH3RF1-201ENST00000284637 HBDP02042 147 aa13.66□□□□□ -0.22
SH3RF1-201ENST00000284637 CACNG7P62955 275 aa13.66□□□□□ -0.22
SH3RF1-201ENST00000284637 CDPF1Q6NVV7 123 aa13.66□□□□□ -0.22
SH3RF1-201ENST00000284637 FAM90A1Q86YD7 464 aa13.66□□□□□ -0.22
SH3RF1-201ENST00000284637 ARPC1AQ92747 370 aa13.66□□□□□ -0.22
SH3RF1-201ENST00000284637 hDV102S1A0JD36 115 aa13.65□□□□□ -0.22
SH3RF1-201ENST00000284637 ERVK11-1P61568 191 aa13.65□□□□□ -0.22
SH3RF1-201ENST00000284637 CD24P25063 80 aa13.65□□□□□ -0.22
SH3RF1-201ENST00000284637 SPATA31B1PQ5VZV4 182 aa13.65□□□□□ -0.22
SH3RF1-201ENST00000284637 PLXNA1Q9UIW2 1896 aa13.65□□□□□ -0.22
SH3RF1-201ENST00000284637 A8MWV9 139 aa13.65□□□□□ -0.22
SH3RF1-201ENST00000284637 PPIFP30405 207 aaKnown RBP13.65□□□□□ -0.22
SH3RF1-201ENST00000284637 TNFRSF14Q92956 283 aa13.65□□□□□ -0.22
SH3RF1-201ENST00000284637 LTBRP36941 435 aa13.64□□□□□ -0.23
SH3RF1-201ENST00000284637 CDKN1AP38936 164 aa13.64□□□□□ -0.23
SH3RF1-201ENST00000284637 PPP1R27Q86WC6 154 aa13.64□□□□□ -0.23
SH3RF1-201ENST00000284637 TSKUQ8WUA8 353 aa13.64□□□□□ -0.23
SH3RF1-201ENST00000284637 LOC102723996A0A087X1L8 192 aa13.64□□□□□ -0.23
SH3RF1-201ENST00000284637 TCRBV4S1A1TA0A5B7 111 aa13.64□□□□□ -0.23
SH3RF1-201ENST00000284637 C17orf100A8MU93 164 aa13.64□□□□□ -0.23
SH3RF1-201ENST00000284637 ATP5J2P56134 94 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms