RNA–Protein interactions for RNA: ENST00000283131.3

SMARCA5-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCA5, Length 7,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-201ENST00000283131 C1orf100Q5SVJ3 147 aa11.06□□□□□ -0.64
SMARCA5-201ENST00000283131 TIMM21Q9BVV7 248 aa11.06□□□□□ -0.64
SMARCA5-201ENST00000283131 GTSF1LQ9H1H1 148 aa11.06□□□□□ -0.64
SMARCA5-201ENST00000283131 DTX4Q9Y2E6 619 aa11.06□□□□□ -0.64
SMARCA5-201ENST00000283131 LSM4Q9Y4Z0 139 aaKnown RBP11.06□□□□□ -0.64
SMARCA5-201ENST00000283131 TMEM144Q7Z5S9 345 aa11.06□□□□□ -0.64
SMARCA5-201ENST00000283131 R3HDMLQ9H3Y0 253 aa11.06□□□□□ -0.64
SMARCA5-201ENST00000283131 BCL6BQ8N143 479 aaPredicted RBP11.05□□□□□ -0.64
SMARCA5-201ENST00000283131 MDS2Q8NDY4 140 aa11.05□□□□□ -0.64
SMARCA5-201ENST00000283131 UCP1P25874 307 aa11.05□□□□□ -0.64
SMARCA5-201ENST00000283131 GNB1LQ9BYB4 327 aa11.05□□□□□ -0.64
SMARCA5-201ENST00000283131 PRCDQ00LT1 54 aa11.05□□□□□ -0.64
SMARCA5-201ENST00000283131 GSN-AS1Q9NRJ2 163 aa11.05□□□□□ -0.64
SMARCA5-201ENST00000283131 FOXS1O43638 330 aa11.05□□□□□ -0.64
SMARCA5-201ENST00000283131 ZNF474Q6S9Z5 364 aaPredicted RBP11.05□□□□□ -0.64
SMARCA5-201ENST00000283131 SPRED2Q7Z698 418 aa11.05□□□□□ -0.64
SMARCA5-201ENST00000283131 ASPHD2Q6ICH7 369 aa11.05□□□□□ -0.64
SMARCA5-201ENST00000283131 C8orf82Q6P1X6 216 aaPredicted RBP11.05□□□□□ -0.64
SMARCA5-201ENST00000283131 RMI2Q96E14 147 aa11.05□□□□□ -0.64
SMARCA5-201ENST00000283131 C9JAW5 83 aa11.05□□□□□ -0.64
SMARCA5-201ENST00000283131 GATA2P23769 480 aaPredicted RBP11.05□□□□□ -0.64
SMARCA5-201ENST00000283131 TGIF1Q15583 401 aa11.05□□□□□ -0.64
SMARCA5-201ENST00000283131 FAM90A2PQ658T7 463 aa11.05□□□□□ -0.64
SMARCA5-201ENST00000283131 ACTL10Q5JWF8 245 aa11.04□□□□□ -0.64
SMARCA5-201ENST00000283131 TEX48A0A1B0GUV7 120 aa11.04□□□□□ -0.64
SMARCA5-201ENST00000283131 IGKV1D-16P01601 117 aa11.04□□□□□ -0.64
SMARCA5-201ENST00000283131 RBM3P98179 157 aaKnown RBP11.04□□□□□ -0.64
SMARCA5-201ENST00000283131 LILRA6Q6PI73 481 aa11.04□□□□□ -0.64
SMARCA5-201ENST00000283131 RNF114Q9Y508 228 aa11.04□□□□□ -0.64
SMARCA5-201ENST00000283131 C5P01031 1676 aa11.04□□□□□ -0.64
SMARCA5-201ENST00000283131 OSTCQ9NRP0 149 aa11.04□□□□□ -0.64
SMARCA5-201ENST00000283131 SELLP14151 372 aa11.04□□□□□ -0.64
SMARCA5-201ENST00000283131 FAM27E3Q08E93 113 aa11.04□□□□□ -0.64
SMARCA5-201ENST00000283131 SRXN1Q9BYN0 137 aa11.04□□□□□ -0.64
SMARCA5-201ENST00000283131 SRRM4A7MD48 611 aaKnown RBP11.03□□□□□ -0.64
SMARCA5-201ENST00000283131 PRB3Q04118 309 aaPredicted RBP11.03□□□□□ -0.64
SMARCA5-201ENST00000283131 KLF5Q13887 457 aaPredicted RBP11.03□□□□□ -0.64
SMARCA5-201ENST00000283131 FAM90A1Q86YD7 464 aa11.03□□□□□ -0.64
SMARCA5-201ENST00000283131 SMRP1Q8NCR6 262 aa11.03□□□□□ -0.64
SMARCA5-201ENST00000283131 C17orf98A8MV24 154 aa11.03□□□□□ -0.64
SMARCA5-201ENST00000283131 DSCR9P59020 149 aa11.03□□□□□ -0.64
SMARCA5-201ENST00000283131 TRAV40A0A0B4J280 105 aa11.03□□□□□ -0.64
SMARCA5-201ENST00000283131 IRF3Q14653 427 aa11.03□□□□□ -0.64
SMARCA5-201ENST00000283131 MPTX1A8MV57 137 aa11.03□□□□□ -0.64
SMARCA5-201ENST00000283131 OR9G9P0C7N8 305 aa11.03□□□□□ -0.64
SMARCA5-201ENST00000283131 RNASE6Q93091 150 aaKnown RBP11.03□□□□□ -0.64
SMARCA5-201ENST00000283131 MLNRO43193 412 aa11.03□□□□□ -0.64
SMARCA5-201ENST00000283131 ZNF708P17019 499 aa11.03□□□□□ -0.64
SMARCA5-201ENST00000283131 CDKN1AP38936 164 aa11.03□□□□□ -0.64
SMARCA5-201ENST00000283131 FAM216BQ8N7L0 139 aa11.03□□□□□ -0.64
SMARCA5-201ENST00000283131 SPANXDQ9BXN6 97 aa11.03□□□□□ -0.64
SMARCA5-201ENST00000283131 NPDC1Q9NQX5 325 aaPredicted RBP11.03□□□□□ -0.64
SMARCA5-201ENST00000283131 C12orf77C9JDV5 145 aa11.03□□□□□ -0.64
SMARCA5-201ENST00000283131 RFLNBQ8N5W9 214 aa11.03□□□□□ -0.64
SMARCA5-201ENST00000283131 SIGLEC12Q96PQ1 595 aa11.03□□□□□ -0.64
SMARCA5-201ENST00000283131 PPP1R3EQ9H7J1 279 aa11.03□□□□□ -0.64
SMARCA5-201ENST00000283131 LHX2P50458 406 aa11.02□□□□□ -0.64
SMARCA5-201ENST00000283131 NEUROG3Q9Y4Z2 214 aa11.02□□□□□ -0.64
SMARCA5-201ENST00000283131 C17orf100A8MU93 164 aa11.02□□□□□ -0.64
SMARCA5-201ENST00000283131 SEC61GP60059 68 aa11.02□□□□□ -0.64
SMARCA5-201ENST00000283131 THADAQ6YHU6 1953 aa11.02□□□□□ -0.65
SMARCA5-201ENST00000283131 DOCK5Q9H7D0 1870 aa11.02□□□□□ -0.65
SMARCA5-201ENST00000283131 CECR9P0C854 216 aa11.02□□□□□ -0.65
SMARCA5-201ENST00000283131 FXYD7P58549 80 aa11.02□□□□□ -0.65
SMARCA5-201ENST00000283131 MAJINQ3KP22 176 aa11.02□□□□□ -0.65
SMARCA5-201ENST00000283131 TMEM170AQ8WVE7 144 aa11.02□□□□□ -0.65
SMARCA5-201ENST00000283131 RNF166Q96A37 237 aaPredicted RBP11.02□□□□□ -0.65
SMARCA5-201ENST00000283131 PLAC1Q9HBJ0 212 aa11.02□□□□□ -0.65
SMARCA5-201ENST00000283131 SRP19P09132 144 aaKnown RBP11.02□□□□□ -0.65
SMARCA5-201ENST00000283131 DOCK1Q14185 1865 aa11.02□□□□□ -0.65
SMARCA5-201ENST00000283131 A0A1W2PPV9 198 aa11.02□□□□□ -0.65
SMARCA5-201ENST00000283131 SPXQ9BT56 116 aa11.02□□□□□ -0.65
SMARCA5-201ENST00000283131 FCN3O75636 299 aa11.01□□□□□ -0.65
SMARCA5-201ENST00000283131 DEFB130BP0DP73 79 aa11.01□□□□□ -0.65
SMARCA5-201ENST00000283131 DEFB130AP0DP74 79 aa11.01□□□□□ -0.65
SMARCA5-201ENST00000283131 H2BFSP57053 126 aa11.01□□□□□ -0.65
SMARCA5-201ENST00000283131 BAALCQ8WXS3 180 aa11.01□□□□□ -0.65
SMARCA5-201ENST00000283131 TNCP24821 2201 aa11.01□□□□□ -0.65
SMARCA5-201ENST00000283131 RPL23P62829 140 aaKnown RBP11.01□□□□□ -0.65
SMARCA5-201ENST00000283131 LY6G5BQ8NDX9 201 aa11.01□□□□□ -0.65
SMARCA5-201ENST00000283131 UBE2E2Q96LR5 201 aa11.01□□□□□ -0.65
SMARCA5-201ENST00000283131 CSTL1Q9H114 145 aa11.01□□□□□ -0.65
SMARCA5-201ENST00000283131 TMEM133Q9H2Q1 129 aa11.01□□□□□ -0.65
SMARCA5-201ENST00000283131 TRAV12-1A0A0B4J245 112 aa11.01□□□□□ -0.65
SMARCA5-201ENST00000283131 NBL1P41271 181 aa11.01□□□□□ -0.65
SMARCA5-201ENST00000283131 PMVKQ15126 192 aa11.01□□□□□ -0.65
SMARCA5-201ENST00000283131 TMEM190Q8WZ59 177 aa11.01□□□□□ -0.65
SMARCA5-201ENST00000283131 SCRT1Q9BWW7 348 aa11.01□□□□□ -0.65
SMARCA5-201ENST00000283131 CD24P25063 80 aa11.01□□□□□ -0.65
SMARCA5-201ENST00000283131 SVIPQ8NHG7 77 aa11.01□□□□□ -0.65
SMARCA5-201ENST00000283131 A0A1W2PRE2 83 aa11.01□□□□□ -0.65
SMARCA5-201ENST00000283131 F5H768 121 aa11.01□□□□□ -0.65
SMARCA5-201ENST00000283131 WFDC6Q9BQY6 131 aa11.01□□□□□ -0.65
SMARCA5-201ENST00000283131 IGLV1-36A0A0B4J1U3 117 aa11□□□□□ -0.65
SMARCA5-201ENST00000283131 FOXL2P58012 376 aa11□□□□□ -0.65
SMARCA5-201ENST00000283131 KLF17Q5JT82 389 aaPredicted RBP11□□□□□ -0.65
SMARCA5-201ENST00000283131 RBM38Q9H0Z9 239 aaKnown RBP11□□□□□ -0.65
SMARCA5-201ENST00000283131 PILRAQ9UKJ1 303 aa11□□□□□ -0.65
SMARCA5-201ENST00000283131 A0A1W2PPI3 338 aa11□□□□□ -0.65
SMARCA5-201ENST00000283131 NHLRC3Q5JS37 347 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms