RNA–Protein interactions for RNA: ENST00000275954.3

TMEM47-201, Transcript of transmembrane protein 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM47, Length 4,054 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM47-201ENST00000275954 A8MWL6 223 aa11.77□□□□□ -0.53
TMEM47-201ENST00000275954 PKIAP61925 76 aa11.77□□□□□ -0.53
TMEM47-201ENST00000275954 GNG5P63218 68 aa11.77□□□□□ -0.53
TMEM47-201ENST00000275954 SSX8Q7RTT4 187 aa11.77□□□□□ -0.53
TMEM47-201ENST00000275954 ATOH7Q8N100 152 aa11.77□□□□□ -0.53
TMEM47-201ENST00000275954 CCL19Q99731 98 aa11.77□□□□□ -0.53
TMEM47-201ENST00000275954 DIRC3C9JPN6 131 aa11.76□□□□□ -0.53
TMEM47-201ENST00000275954 KLHDC1Q8N7A1 406 aa11.76□□□□□ -0.53
TMEM47-201ENST00000275954 MGST2Q99735 147 aa11.76□□□□□ -0.53
TMEM47-201ENST00000275954 DPM3Q9P2X0 92 aa11.76□□□□□ -0.53
TMEM47-201ENST00000275954 CHD6Q8TD26 2715 aa11.76□□□□□ -0.53
TMEM47-201ENST00000275954 LOC389332A0A1B0GUA5 103 aa11.76□□□□□ -0.53
TMEM47-201ENST00000275954 PLA2G5P39877 138 aa11.76□□□□□ -0.53
TMEM47-201ENST00000275954 NEU1Q99519 415 aa11.76□□□□□ -0.53
TMEM47-201ENST00000275954 FOXA2Q9Y261 457 aaPredicted RBP11.76□□□□□ -0.53
TMEM47-201ENST00000275954 UFC1Q9Y3C8 167 aa11.76□□□□□ -0.53
TMEM47-201ENST00000275954 DYSFO75923 2080 aa11.76□□□□□ -0.53
TMEM47-201ENST00000275954 SORL1Q92673 2214 aa11.76□□□□□ -0.53
TMEM47-201ENST00000275954 MMP23AO75900 390 aa11.76□□□□□ -0.53
TMEM47-201ENST00000275954 Q6ZN92 141 aa11.76□□□□□ -0.53
TMEM47-201ENST00000275954 GBGT1Q8N5D6 347 aa11.76□□□□□ -0.53
TMEM47-201ENST00000275954 GSX1Q9H4S2 264 aaPredicted RBP11.76□□□□□ -0.53
TMEM47-201ENST00000275954 NPIPB11E5RHQ5 1161 aa11.76□□□□□ -0.53
TMEM47-201ENST00000275954 OR5AL1P0C617 328 aa11.76□□□□□ -0.53
TMEM47-201ENST00000275954 ZNF134P52741 427 aa11.76□□□□□ -0.53
TMEM47-201ENST00000275954 PRCDQ00LT1 54 aa11.76□□□□□ -0.53
TMEM47-201ENST00000275954 CD69Q07108 199 aa11.76□□□□□ -0.53
TMEM47-201ENST00000275954 FAM90A2PQ658T7 463 aa11.76□□□□□ -0.53
TMEM47-201ENST00000275954 HAPLN4Q86UW8 402 aa11.76□□□□□ -0.53
TMEM47-201ENST00000275954 GAFA1Q96PS6 74 aa11.76□□□□□ -0.53
TMEM47-201ENST00000275954 TMEM133Q9H2Q1 129 aa11.76□□□□□ -0.53
TMEM47-201ENST00000275954 CORTO00230 105 aa11.75□□□□□ -0.53
TMEM47-201ENST00000275954 LY6EQ16553 131 aa11.75□□□□□ -0.53
TMEM47-201ENST00000275954 LOC400499M0QZD8 3231 aa11.75□□□□□ -0.53
TMEM47-201ENST00000275954 TRAV1-1A0A0B4J248 108 aa11.75□□□□□ -0.53
TMEM47-201ENST00000275954 IGHV3-66A0A0C4DH42 116 aa11.75□□□□□ -0.53
TMEM47-201ENST00000275954 C5orf52A6NGY3 159 aa11.75□□□□□ -0.53
TMEM47-201ENST00000275954 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.75□□□□□ -0.53
TMEM47-201ENST00000275954 LMO1P25800 156 aa11.75□□□□□ -0.53
TMEM47-201ENST00000275954 SPRNQ5BIV9 151 aa11.75□□□□□ -0.53
TMEM47-201ENST00000275954 WFDC3Q8IUB2 231 aa11.75□□□□□ -0.53
TMEM47-201ENST00000275954 SRSF12Q8WXF0 261 aaKnown RBP11.75□□□□□ -0.53
TMEM47-201ENST00000275954 CFAP47Q6ZTR5 3102 aa11.75□□□□□ -0.53
TMEM47-201ENST00000275954 C10orf142B7Z368 130 aa11.75□□□□□ -0.53
TMEM47-201ENST00000275954 ZNF788Q6ZQV5 615 aa11.75□□□□□ -0.53
TMEM47-201ENST00000275954 TMEM183AQ8IXX5 376 aa11.75□□□□□ -0.53
TMEM47-201ENST00000275954 TMEM178BH3BS89 294 aa11.74□□□□□ -0.53
TMEM47-201ENST00000275954 ISLRO14498 428 aa11.74□□□□□ -0.53
TMEM47-201ENST00000275954 ZNF207O43670 478 aaKnown RBP11.74□□□□□ -0.53
TMEM47-201ENST00000275954 OR52E5Q8NH55 327 aa11.74□□□□□ -0.53
TMEM47-201ENST00000275954 AMY1AP04745 511 aa11.74□□□□□ -0.53
TMEM47-201ENST00000275954 WNT10AQ9GZT5 417 aa11.74□□□□□ -0.53
TMEM47-201ENST00000275954 CA7P43166 264 aa11.74□□□□□ -0.53
TMEM47-201ENST00000275954 ZNF726P1Q15940 193 aa11.74□□□□□ -0.53
TMEM47-201ENST00000275954 TMEM30BQ3MIR4 351 aa11.74□□□□□ -0.53
TMEM47-201ENST00000275954 KLF17Q5JT82 389 aaPredicted RBP11.74□□□□□ -0.53
TMEM47-201ENST00000275954 PPP1R27Q86WC6 154 aa11.74□□□□□ -0.53
TMEM47-201ENST00000275954 SLX1AQ9BQ83 275 aa11.74□□□□□ -0.53
TMEM47-201ENST00000275954 AGMATQ9BSE5 352 aa11.74□□□□□ -0.53
TMEM47-201ENST00000275954 DDTP30046 118 aa11.73□□□□□ -0.53
TMEM47-201ENST00000275954 FAM162BQ5T6X4 162 aa11.73□□□□□ -0.53
TMEM47-201ENST00000275954 CRIP3Q6Q6R5 217 aa11.73□□□□□ -0.53
TMEM47-201ENST00000275954 CBLN4Q9NTU7 201 aa11.73□□□□□ -0.53
TMEM47-201ENST00000275954 STAG3L2P0CL84 134 aa11.73□□□□□ -0.53
TMEM47-201ENST00000275954 STAG3L3P0CL85 134 aa11.73□□□□□ -0.53
TMEM47-201ENST00000275954 Q8NFD4 153 aa11.73□□□□□ -0.53
TMEM47-201ENST00000275954 ASPMQ8IZT6 3477 aa11.73□□□□□ -0.53
TMEM47-201ENST00000275954 GOSR1O95249 250 aa11.73□□□□□ -0.53
TMEM47-201ENST00000275954 TGFAP01135 160 aa11.73□□□□□ -0.53
TMEM47-201ENST00000275954 VAMP3Q15836 100 aa11.73□□□□□ -0.53
TMEM47-201ENST00000275954 COX19Q49B96 90 aa11.73□□□□□ -0.53
TMEM47-201ENST00000275954 FAM19A2Q8N3H0 131 aa11.73□□□□□ -0.53
TMEM47-201ENST00000275954 CACNG8Q8WXS5 425 aa11.73□□□□□ -0.53
TMEM47-201ENST00000275954 TIMM23O14925 209 aa11.72□□□□□ -0.53
TMEM47-201ENST00000275954 SOD3P08294 240 aa11.72□□□□□ -0.53
TMEM47-201ENST00000275954 FAM106CPP0CH98 169 aa11.72□□□□□ -0.53
TMEM47-201ENST00000275954 CD33P20138 364 aa11.72□□□□□ -0.53
TMEM47-201ENST00000275954 MFAP4P55083 255 aa11.72□□□□□ -0.53
TMEM47-201ENST00000275954 C11orf53Q8IXP5 236 aa11.72□□□□□ -0.53
TMEM47-201ENST00000275954 ATMQ13315 3056 aa11.72□□□□□ -0.53
TMEM47-201ENST00000275954 M0R143 59 aa11.72□□□□□ -0.53
TMEM47-201ENST00000275954 HAX1O00165 279 aa11.72□□□□□ -0.53
TMEM47-201ENST00000275954 ZNF672Q499Z4 452 aaPredicted RBP11.72□□□□□ -0.53
TMEM47-201ENST00000275954 LINC01551Q86U37 167 aa11.72□□□□□ -0.53
TMEM47-201ENST00000275954 IL36BQ9NZH7 164 aa11.72□□□□□ -0.53
TMEM47-201ENST00000275954 ATRQ13535 2644 aa11.72□□□□□ -0.53
TMEM47-201ENST00000275954 HLA-DQA1P01909 254 aa11.72□□□□□ -0.53
TMEM47-201ENST00000275954 C19orf24Q9BVV8 132 aa11.72□□□□□ -0.53
TMEM47-201ENST00000275954 PEX7O00628 323 aa11.71□□□□□ -0.53
TMEM47-201ENST00000275954 MT-ND6P03923 174 aa11.71□□□□□ -0.53
TMEM47-201ENST00000275954 WNT2P09544 360 aa11.71□□□□□ -0.53
TMEM47-201ENST00000275954 HTN1P15515 57 aa11.71□□□□□ -0.53
TMEM47-201ENST00000275954 GPX4P36969 197 aaPredicted RBP11.71□□□□□ -0.53
TMEM47-201ENST00000275954 Q6ZPA2 131 aa11.71□□□□□ -0.53
TMEM47-201ENST00000275954 MRPL32Q9BYC8 188 aaKnown RBP11.71□□□□□ -0.53
TMEM47-201ENST00000275954 UBE2CO00762 179 aa11.71□□□□□ -0.53
TMEM47-201ENST00000275954 PF4V1P10720 104 aa11.71□□□□□ -0.53
TMEM47-201ENST00000275954 RIGQ13278 110 aa11.71□□□□□ -0.53
TMEM47-201ENST00000275954 TEX38Q6PEX7 206 aa11.71□□□□□ -0.53
TMEM47-201ENST00000275954 OR8A1Q8NGG7 326 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms