RNA–Protein interactions for RNA: ENST00000274938.7

SCUBE3-201, Transcript of signal peptide, CUB domain and EGF like domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCUBE3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3-201ENST00000274938 KIAA1551Q9HCM1 1747 aa7.23□□□□□ -1.25
SCUBE3-201ENST00000274938 PAX4O43316 350 aa7.23□□□□□ -1.25
SCUBE3-201ENST00000274938 C20orf144Q9BQM9 153 aa7.23□□□□□ -1.25
SCUBE3-201ENST00000274938 COX11Q9Y6N1 276 aa7.23□□□□□ -1.25
SCUBE3-201ENST00000274938 PRRC2BQ5JSZ5 2229 aaKnown RBP7.23□□□□□ -1.25
SCUBE3-201ENST00000274938 SMAD7O15105 426 aaKnown RBP7.23□□□□□ -1.25
SCUBE3-201ENST00000274938 TCRAP04437 139 aa7.23□□□□□ -1.25
SCUBE3-201ENST00000274938 PRADC1Q9BSG0 188 aa7.23□□□□□ -1.25
SCUBE3-201ENST00000274938 CHAC1Q9BUX1 264 aa7.23□□□□□ -1.25
SCUBE3-201ENST00000274938 SPAG17Q6Q759 2223 aa7.22□□□□□ -1.25
SCUBE3-201ENST00000274938 PSG1P11464 419 aa7.22□□□□□ -1.25
SCUBE3-201ENST00000274938 NHSQ6T4R5 1651 aa7.22□□□□□ -1.25
SCUBE3-201ENST00000274938 CDK5RAP2Q96SN8 1893 aa7.22□□□□□ -1.25
SCUBE3-201ENST00000274938 MDC1Q14676 2089 aaKnown RBP7.22□□□□□ -1.25
SCUBE3-201ENST00000274938 IGHV3OR16-10A0A075B7F0 116 aa7.22□□□□□ -1.25
SCUBE3-201ENST00000274938 TMEM8BA6NDV4 472 aa7.22□□□□□ -1.25
SCUBE3-201ENST00000274938 LHFPL1Q86WI0 220 aa7.22□□□□□ -1.25
SCUBE3-201ENST00000274938 SIGLEC15Q6ZMC9 328 aa7.22□□□□□ -1.25
SCUBE3-201ENST00000274938 RNF5Q99942 180 aa7.22□□□□□ -1.25
SCUBE3-201ENST00000274938 DICER1Q9UPY3 1922 aaKnown RBP7.22□□□□□ -1.25
SCUBE3-201ENST00000274938 LYPD1Q8N2G4 141 aa7.22□□□□□ -1.25
SCUBE3-201ENST00000274938 GFRA4Q9GZZ7 299 aa7.22□□□□□ -1.25
SCUBE3-201ENST00000274938 CACNA1CQ13936 2221 aa7.22□□□□□ -1.25
SCUBE3-201ENST00000274938 CD55P08174 381 aa7.22□□□□□ -1.25
SCUBE3-201ENST00000274938 C1orf122Q6ZSJ8 110 aa7.22□□□□□ -1.25
SCUBE3-201ENST00000274938 J3QRE1 110 aa7.22□□□□□ -1.25
SCUBE3-201ENST00000274938 TRGV9Q99603 122 aa7.22□□□□□ -1.25
SCUBE3-201ENST00000274938 VGLL1Q99990 258 aa7.22□□□□□ -1.25
SCUBE3-201ENST00000274938 PRSS22Q9GZN4 317 aa7.22□□□□□ -1.25
SCUBE3-201ENST00000274938 A0A087X0K7 114 aa7.21□□□□□ -1.25
SCUBE3-201ENST00000274938 LYZL1Q6UWQ5 148 aa7.21□□□□□ -1.25
SCUBE3-201ENST00000274938 TRBV20-1A0A075B6N2 111 aa7.21□□□□□ -1.25
SCUBE3-201ENST00000274938 hDV102S1A0JD36 115 aa7.21□□□□□ -1.25
SCUBE3-201ENST00000274938 PSG3Q16557 428 aa7.21□□□□□ -1.25
SCUBE3-201ENST00000274938 C9orf139Q6ZV77 190 aa7.21□□□□□ -1.25
SCUBE3-201ENST00000274938 NAA38Q9BRA0 125 aaKnown RBP7.21□□□□□ -1.25
SCUBE3-201ENST00000274938 SHROOM3Q8TF72 1996 aa7.21□□□□□ -1.25
SCUBE3-201ENST00000274938 OTOFQ9HC10 1997 aa7.21□□□□□ -1.25
SCUBE3-201ENST00000274938 SCN7AQ01118 1682 aa7.21□□□□□ -1.25
SCUBE3-201ENST00000274938 NPIPB5A8MRT5 1133 aa7.21□□□□□ -1.26
SCUBE3-201ENST00000274938 TFF2Q03403 129 aa7.21□□□□□ -1.26
SCUBE3-201ENST00000274938 RAMP3O60896 148 aa7.21□□□□□ -1.26
SCUBE3-201ENST00000274938 RPL36AP83881 106 aaKnown RBP7.21□□□□□ -1.26
SCUBE3-201ENST00000274938 Q0VG73 95 aa7.21□□□□□ -1.26
SCUBE3-201ENST00000274938 GAGE2AQ6NT46 116 aa7.21□□□□□ -1.26
SCUBE3-201ENST00000274938 RPL36ALQ969Q0 106 aaKnown RBP7.21□□□□□ -1.26
SCUBE3-201ENST00000274938 IGKV1-9A0A0C4DH69 117 aa7.21□□□□□ -1.26
SCUBE3-201ENST00000274938 PAX8Q06710 450 aa7.21□□□□□ -1.26
SCUBE3-201ENST00000274938 TMEM14EPQ6UXP3 125 aa7.21□□□□□ -1.26
SCUBE3-201ENST00000274938 IGHV3-11P01762 117 aa7.21□□□□□ -1.26
SCUBE3-201ENST00000274938 HTN3P15516 51 aa7.21□□□□□ -1.26
SCUBE3-201ENST00000274938 PPIFP30405 207 aaKnown RBP7.21□□□□□ -1.26
SCUBE3-201ENST00000274938 TMEM256Q8N2U0 113 aa7.21□□□□□ -1.26
SCUBE3-201ENST00000274938 ZNF664Q8N3J9 261 aa7.21□□□□□ -1.26
SCUBE3-201ENST00000274938 PAQR4Q8N4S7 273 aaPredicted RBP7.21□□□□□ -1.26
SCUBE3-201ENST00000274938 LY75O60449 1722 aa7.2□□□□□ -1.26
SCUBE3-201ENST00000274938 RFPL3SP0C7P2 107 aa7.2□□□□□ -1.26
SCUBE3-201ENST00000274938 VDAC2P45880 294 aaPredicted RBP7.2□□□□□ -1.26
SCUBE3-201ENST00000274938 COLCA1Q6ZS62 124 aa7.2□□□□□ -1.26
SCUBE3-201ENST00000274938 IGHV3-64A0A075B6Q5 118 aa7.2□□□□□ -1.26
SCUBE3-201ENST00000274938 IGLV3-32A0A0A0MS00 114 aa7.2□□□□□ -1.26
SCUBE3-201ENST00000274938 IGHV1-2P23083 117 aa7.2□□□□□ -1.26
SCUBE3-201ENST00000274938 FAM201AQ5SY85 155 aa7.2□□□□□ -1.26
SCUBE3-201ENST00000274938 UTF1Q5T230 341 aa7.2□□□□□ -1.26
SCUBE3-201ENST00000274938 IGHV3OR16-8A0A075B7F1 116 aa7.2□□□□□ -1.26
SCUBE3-201ENST00000274938 TRAV8-3A0A0A6YYJ7 113 aa7.2□□□□□ -1.26
SCUBE3-201ENST00000274938 ZNF876PQ49A33 203 aa7.2□□□□□ -1.26
SCUBE3-201ENST00000274938 NUP35Q8NFH5 326 aa7.2□□□□□ -1.26
SCUBE3-201ENST00000274938 LYZL4Q96KX0 146 aa7.2□□□□□ -1.26
SCUBE3-201ENST00000274938 A0A1W2PR77 199 aa7.2□□□□□ -1.26
SCUBE3-201ENST00000274938 ZNF138P52744 262 aa7.2□□□□□ -1.26
SCUBE3-201ENST00000274938 ZC2HC1BQ5TFG8 222 aa7.2□□□□□ -1.26
SCUBE3-201ENST00000274938 LINC01560Q8TB33 94 aa7.2□□□□□ -1.26
SCUBE3-201ENST00000274938 SSC4DQ8WTU2 575 aa7.2□□□□□ -1.26
SCUBE3-201ENST00000274938 GLMPQ8WWB7 406 aa7.2□□□□□ -1.26
SCUBE3-201ENST00000274938 GLI3P10071 1580 aa7.2□□□□□ -1.26
SCUBE3-201ENST00000274938 A0A0U1RRA0 63 aa7.2□□□□□ -1.26
SCUBE3-201ENST00000274938 A0A1B0GWJ7 208 aa7.2□□□□□ -1.26
SCUBE3-201ENST00000274938 H3BMM0 161 aa7.2□□□□□ -1.26
SCUBE3-201ENST00000274938 NCR2O95944 276 aa7.2□□□□□ -1.26
SCUBE3-201ENST00000274938 BSPH1Q075Z2 132 aa7.2□□□□□ -1.26
SCUBE3-201ENST00000274938 LY6G5BQ8NDX9 201 aa7.2□□□□□ -1.26
SCUBE3-201ENST00000274938 PPDPFLQ8WWR9 84 aa7.2□□□□□ -1.26
SCUBE3-201ENST00000274938 UBE2WQ96B02 151 aa7.2□□□□□ -1.26
SCUBE3-201ENST00000274938 LINC00477Q96M19 166 aa7.2□□□□□ -1.26
SCUBE3-201ENST00000274938 ECM29Q5VYK3 1845 aa7.2□□□□□ -1.26
SCUBE3-201ENST00000274938 SOCS3O14543 225 aa7.2□□□□□ -1.26
SCUBE3-201ENST00000274938 SPSB3Q6PJ21 355 aa7.2□□□□□ -1.26
SCUBE3-201ENST00000274938 FAM168AQ92567 244 aa7.2□□□□□ -1.26
SCUBE3-201ENST00000274938 SCN1AP35498 2009 aa7.2□□□□□ -1.26
SCUBE3-201ENST00000274938 TIMM21Q9BVV7 248 aa7.19□□□□□ -1.26
SCUBE3-201ENST00000274938 USP54Q70EL1 1684 aa7.19□□□□□ -1.26
SCUBE3-201ENST00000274938 OOSP1A8MZH6 123 aa7.19□□□□□ -1.26
SCUBE3-201ENST00000274938 C9JAW5 83 aa7.19□□□□□ -1.26
SCUBE3-201ENST00000274938 FNDC10F2Z333 226 aa7.19□□□□□ -1.26
SCUBE3-201ENST00000274938 CCL3L1P16619 93 aa7.19□□□□□ -1.26
SCUBE3-201ENST00000274938 MBNL3Q9NUK0 354 aaKnown RBP7.19□□□□□ -1.26
SCUBE3-201ENST00000274938 CTSBP07858 339 aa7.19□□□□□ -1.26
SCUBE3-201ENST00000274938 FAM27E3Q08E93 113 aa7.19□□□□□ -1.26
SCUBE3-201ENST00000274938 C7orf69Q9H7B7 122 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms