RNA–Protein interactions for RNA: ENST00000265689.8

CHKA-201, Transcript of choline kinase alpha, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CHKA, Length 2,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-201ENST00000265689 MMDQ15546 238 aa13.46□□□□□ -0.25
CHKA-201ENST00000265689 CLEC12BQ2HXU8 276 aa13.46□□□□□ -0.25
CHKA-201ENST00000265689 VMO1Q7Z5L0 202 aa13.46□□□□□ -0.25
CHKA-201ENST00000265689 SRSF12Q8WXF0 261 aaKnown RBP13.46□□□□□ -0.25
CHKA-201ENST00000265689 RNF5Q99942 180 aa13.46□□□□□ -0.25
CHKA-201ENST00000265689 TRBV24-1A0A075B6N3 115 aa13.46□□□□□ -0.26
CHKA-201ENST00000265689 CRYGCP07315 174 aa13.46□□□□□ -0.26
CHKA-201ENST00000265689 C8orf88P0DMB2 117 aa13.46□□□□□ -0.26
CHKA-201ENST00000265689 S100PP25815 95 aa13.46□□□□□ -0.26
CHKA-201ENST00000265689 GALR1P47211 349 aa13.46□□□□□ -0.26
CHKA-201ENST00000265689 PATE2Q6UY27 113 aa13.46□□□□□ -0.26
CHKA-201ENST00000265689 PQLC2Q6ZP29 291 aa13.46□□□□□ -0.26
CHKA-201ENST00000265689 TMEM167BQ9NRX6 74 aa13.46□□□□□ -0.26
CHKA-201ENST00000265689 DMRT1Q9Y5R6 373 aa13.46□□□□□ -0.26
CHKA-201ENST00000265689 COX7A2P2O60397 106 aa13.45□□□□□ -0.26
CHKA-201ENST00000265689 MOSP00540 346 aa13.45□□□□□ -0.26
CHKA-201ENST00000265689 HNF1AP20823 631 aa13.45□□□□□ -0.26
CHKA-201ENST00000265689 EFNA4P52798 201 aa13.45□□□□□ -0.26
CHKA-201ENST00000265689 TAS2R45P59539 299 aa13.45□□□□□ -0.26
CHKA-201ENST00000265689 LCN2P80188 198 aa13.45□□□□□ -0.26
CHKA-201ENST00000265689 PDZD11Q5EBL8 140 aa13.45□□□□□ -0.26
CHKA-201ENST00000265689 OR1P1Q8NH06 330 aa13.45□□□□□ -0.26
CHKA-201ENST00000265689 OR4X1Q8NH49 305 aa13.45□□□□□ -0.26
CHKA-201ENST00000265689 FAM167A-AS1Q96KT0 104 aa13.45□□□□□ -0.26
CHKA-201ENST00000265689 UHRF2Q96PU4 802 aa13.45□□□□□ -0.26
CHKA-201ENST00000265689 SLC25A2Q9BXI2 301 aa13.45□□□□□ -0.26
CHKA-201ENST00000265689 CEACAM3P40198 252 aa13.45□□□□□ -0.26
CHKA-201ENST00000265689 PYY3Q5JQD4 70 aa13.45□□□□□ -0.26
CHKA-201ENST00000265689 GFI1BQ5VTD9 330 aa13.45□□□□□ -0.26
CHKA-201ENST00000265689 ANAPC16Q96DE5 110 aa13.45□□□□□ -0.26
CHKA-201ENST00000265689 SSX2Q16385 188 aa13.44□□□□□ -0.26
CHKA-201ENST00000265689 ETFRF1Q6IPR1 90 aa13.44□□□□□ -0.26
CHKA-201ENST00000265689 DYNAPQ8N1N2 210 aa13.44□□□□□ -0.26
CHKA-201ENST00000265689 OR5B12Q96R08 314 aa13.44□□□□□ -0.26
CHKA-201ENST00000265689 MRPL32Q9BYC8 188 aaKnown RBP13.44□□□□□ -0.26
CHKA-201ENST00000265689 F11RQ9Y624 299 aaKnown RBP13.44□□□□□ -0.26
CHKA-201ENST00000265689 ABCA2Q9BZC7 2435 aa13.44□□□□□ -0.26
CHKA-201ENST00000265689 HIST1H2BKO60814 126 aa13.44□□□□□ -0.26
CHKA-201ENST00000265689 HIST1H2BJP06899 126 aa13.44□□□□□ -0.26
CHKA-201ENST00000265689 HIST1H2BOP23527 126 aa13.44□□□□□ -0.26
CHKA-201ENST00000265689 HIST1H2BBP33778 126 aa13.44□□□□□ -0.26
CHKA-201ENST00000265689 HIST1H2BDP58876 126 aa13.44□□□□□ -0.26
CHKA-201ENST00000265689 HIST1H2BCP62807 126 aa13.44□□□□□ -0.26
CHKA-201ENST00000265689 HIST2H2BEQ16778 126 aa13.44□□□□□ -0.26
CHKA-201ENST00000265689 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.44□□□□□ -0.26
CHKA-201ENST00000265689 C10orf113Q5VZT2 155 aa13.44□□□□□ -0.26
CHKA-201ENST00000265689 HIST1H2BHQ93079 126 aa13.44□□□□□ -0.26
CHKA-201ENST00000265689 HIST1H2BNQ99877 126 aa13.44□□□□□ -0.26
CHKA-201ENST00000265689 HIST1H2BMQ99879 126 aa13.44□□□□□ -0.26
CHKA-201ENST00000265689 TNFRSF19Q9NS68 423 aa13.44□□□□□ -0.26
CHKA-201ENST00000265689 CNIH1O95406 144 aa13.43□□□□□ -0.26
CHKA-201ENST00000265689 CDX1P47902 265 aaPredicted RBP13.43□□□□□ -0.26
CHKA-201ENST00000265689 OCC1Q8TAD7 63 aa13.43□□□□□ -0.26
CHKA-201ENST00000265689 C11orf52Q96A22 123 aa13.43□□□□□ -0.26
CHKA-201ENST00000265689 GSX1Q9H4S2 264 aaPredicted RBP13.43□□□□□ -0.26
CHKA-201ENST00000265689 ZNF355PQ9NSJ1 428 aa13.43□□□□□ -0.26
CHKA-201ENST00000265689 NBR2O15453 112 aa13.43□□□□□ -0.26
CHKA-201ENST00000265689 HOXB4P17483 251 aaPredicted RBP13.43□□□□□ -0.26
CHKA-201ENST00000265689 HES1Q14469 280 aa13.43□□□□□ -0.26
CHKA-201ENST00000265689 C1orf122Q6ZSJ8 110 aa13.43□□□□□ -0.26
CHKA-201ENST00000265689 OR5AU1Q8NGC0 362 aa13.43□□□□□ -0.26
CHKA-201ENST00000265689 EAF1Q96JC9 268 aaPredicted RBP13.43□□□□□ -0.26
CHKA-201ENST00000265689 CRYBB3P26998 211 aa13.42□□□□□ -0.26
CHKA-201ENST00000265689 SELENOTP62341 195 aa13.42□□□□□ -0.26
CHKA-201ENST00000265689 OR1L4Q8NGR5 311 aa13.42□□□□□ -0.26
CHKA-201ENST00000265689 RNF2Q99496 336 aa13.42□□□□□ -0.26
CHKA-201ENST00000265689 PYGO2Q9BRQ0 406 aa13.42□□□□□ -0.26
CHKA-201ENST00000265689 GGTLC3B5MD39 225 aa13.42□□□□□ -0.26
CHKA-201ENST00000265689 PYYP10082 97 aa13.42□□□□□ -0.26
CHKA-201ENST00000265689 KIR3DL3Q8N743 410 aa13.42□□□□□ -0.26
CHKA-201ENST00000265689 TMEM116Q8NCL8 245 aa13.42□□□□□ -0.26
CHKA-201ENST00000265689 PFDN5Q99471 154 aa13.42□□□□□ -0.26
CHKA-201ENST00000265689 BPESC1Q9GZL8 116 aa13.42□□□□□ -0.26
CHKA-201ENST00000265689 ZMAT5Q9UDW3 170 aaKnown RBP13.42□□□□□ -0.26
CHKA-201ENST00000265689 ARL2-SNX15V9GYD0 113 aa13.42□□□□□ -0.26
CHKA-201ENST00000265689 A0A1W2PPQ1 181 aa13.41□□□□□ -0.26
CHKA-201ENST00000265689 ORM2P19652 201 aa13.41□□□□□ -0.26
CHKA-201ENST00000265689 SUMO1P63165 101 aaKnown RBP13.41□□□□□ -0.26
CHKA-201ENST00000265689 UBE2L3P68036 154 aaKnown RBP13.41□□□□□ -0.26
CHKA-201ENST00000265689 PAX2Q02962 417 aa13.41□□□□□ -0.26
CHKA-201ENST00000265689 C9orf152Q5JTZ5 239 aa13.41□□□□□ -0.26
CHKA-201ENST00000265689 FRZBQ92765 325 aa13.41□□□□□ -0.26
CHKA-201ENST00000265689 FAM103A1Q9BTL3 118 aaKnown RBP13.41□□□□□ -0.26
CHKA-201ENST00000265689 WNT10AQ9GZT5 417 aa13.41□□□□□ -0.26
CHKA-201ENST00000265689 BPIFB3P59826 476 aa13.41□□□□□ -0.26
CHKA-201ENST00000265689 NPBQ8NG41 125 aa13.41□□□□□ -0.26
CHKA-201ENST00000265689 C22orf15Q8WYQ4 148 aa13.41□□□□□ -0.26
CHKA-201ENST00000265689 SFRP2Q96HF1 295 aa13.41□□□□□ -0.26
CHKA-201ENST00000265689 TRGV9Q99603 122 aa13.41□□□□□ -0.26
CHKA-201ENST00000265689 GPR61Q9BZJ8 451 aa13.41□□□□□ -0.26
CHKA-201ENST00000265689 SIRPDQ9H106 197 aa13.41□□□□□ -0.26
CHKA-201ENST00000265689 GAR1Q9NY12 217 aaKnown RBP13.41□□□□□ -0.26
CHKA-201ENST00000265689 ABCA1O95477 2261 aa13.4□□□□□ -0.26
CHKA-201ENST00000265689 K7EN84 100 aa13.4□□□□□ -0.26
CHKA-201ENST00000265689 CORTO00230 105 aa13.4□□□□□ -0.26
CHKA-201ENST00000265689 S100A2P29034 98 aa13.4□□□□□ -0.26
CHKA-201ENST00000265689 FAM3BP58499 235 aaPredicted RBP13.4□□□□□ -0.26
CHKA-201ENST00000265689 LINC00305Q7Z4B0 112 aa13.4□□□□□ -0.26
CHKA-201ENST00000265689 OR10D4PQ8NGN7 298 aa13.4□□□□□ -0.26
CHKA-201ENST00000265689 OR1B1Q8NGR6 318 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms