RNA–Protein interactions for RNA: ENST00000265038.9

ERCC8-201, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERCC8, Length 2,017 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-201ENST00000265038 IFNA4P05014 189 aa6.32□□□□□ -1.4
ERCC8-201ENST00000265038 FRMD6-AS1P0C7T7 363 aa6.32□□□□□ -1.4
ERCC8-201ENST00000265038 POLR2GP62487 172 aaKnown RBP eCLIP6.32□□□□□ -1.4
ERCC8-201ENST00000265038 SLC16A13Q7RTY0 426 aa6.32□□□□□ -1.4
ERCC8-201ENST00000265038 GTSCR1Q86UQ5 136 aa6.32□□□□□ -1.4
ERCC8-201ENST00000265038 SBSPONQ8IVN8 264 aa6.32□□□□□ -1.4
ERCC8-201ENST00000265038 NEURL2Q9BR09 285 aa6.32□□□□□ -1.4
ERCC8-201ENST00000265038 RHPN1-AS1Q9BWJ2 59 aa6.32□□□□□ -1.4
ERCC8-201ENST00000265038 TRAV30A0A087WSZ9 112 aa6.32□□□□□ -1.4
ERCC8-201ENST00000265038 IGHV3-49A0A0A0MS15 119 aa6.32□□□□□ -1.4
ERCC8-201ENST00000265038 APOHP02749 345 aaPredicted RBP6.32□□□□□ -1.4
ERCC8-201ENST00000265038 OR10J1P30954 320 aa6.32□□□□□ -1.4
ERCC8-201ENST00000265038 NKX2-1P43699 371 aaPredicted RBP6.32□□□□□ -1.4
ERCC8-201ENST00000265038 CD81P60033 236 aa6.32□□□□□ -1.4
ERCC8-201ENST00000265038 IAH1Q2TAA2 248 aaPredicted RBP6.32□□□□□ -1.4
ERCC8-201ENST00000265038 RBPMS2Q6ZRY4 209 aaKnown RBP6.32□□□□□ -1.4
ERCC8-201ENST00000265038 LILRB2Q8N423 598 aa6.32□□□□□ -1.4
ERCC8-201ENST00000265038 ZBTB8BQ8NAP8 495 aaPredicted RBP6.32□□□□□ -1.4
ERCC8-201ENST00000265038 OR1S2Q8NGQ3 325 aa6.32□□□□□ -1.4
ERCC8-201ENST00000265038 CIB3Q96Q77 187 aaPredicted RBP6.32□□□□□ -1.4
ERCC8-201ENST00000265038 RNF2Q99496 336 aa6.32□□□□□ -1.4
ERCC8-201ENST00000265038 IGHV3OR16-13A0A075B7E8 117 aa6.31□□□□□ -1.4
ERCC8-201ENST00000265038 IGHV3-74A0A0B4J1X5 117 aa6.31□□□□□ -1.4
ERCC8-201ENST00000265038 PRSS46E5RG02 174 aa6.31□□□□□ -1.4
ERCC8-201ENST00000265038 CCSO14618 274 aa6.31□□□□□ -1.4
ERCC8-201ENST00000265038 TSPAN4O14817 238 aa6.31□□□□□ -1.4
ERCC8-201ENST00000265038 GPX4P36969 197 aaPredicted RBP6.31□□□□□ -1.4
ERCC8-201ENST00000265038 PAX9P55771 341 aa6.31□□□□□ -1.4
ERCC8-201ENST00000265038 YPEL3P61236 119 aaPredicted RBP6.31□□□□□ -1.4
ERCC8-201ENST00000265038 GAMTQ14353 236 aa6.31□□□□□ -1.4
ERCC8-201ENST00000265038 NRARPQ7Z6K4 114 aa6.31□□□□□ -1.4
ERCC8-201ENST00000265038 C12orf45Q8N5I9 185 aaPredicted RBP6.31□□□□□ -1.4
ERCC8-201ENST00000265038 ACY3Q96HD9 319 aa6.31□□□□□ -1.4
ERCC8-201ENST00000265038 WFDC10AQ9H1F0 79 aa6.31□□□□□ -1.4
ERCC8-201ENST00000265038 PAIP2BQ9ULR5 123 aaKnown RBP6.31□□□□□ -1.4
ERCC8-201ENST00000265038 DNAH9Q9NYC9 4486 aa6.3□□□□□ -1.4
ERCC8-201ENST00000265038 IL5P05113 134 aa6.3□□□□□ -1.4
ERCC8-201ENST00000265038 NHLRC4P0CG21 123 aaPredicted RBP6.3□□□□□ -1.4
ERCC8-201ENST00000265038 RAB11AP62491 216 aa6.3□□□□□ -1.4
ERCC8-201ENST00000265038 RPP30P78346 268 aaKnown RBP6.3□□□□□ -1.4
ERCC8-201ENST00000265038 SPANXN5Q5MJ07 72 aa6.3□□□□□ -1.4
ERCC8-201ENST00000265038 FAM90A2PQ658T7 463 aa6.3□□□□□ -1.4
ERCC8-201ENST00000265038 LAMTOR1Q6IAA8 161 aa6.3□□□□□ -1.4
ERCC8-201ENST00000265038 DEFB125Q8N687 156 aa6.3□□□□□ -1.4
ERCC8-201ENST00000265038 ENKURQ8TC29 256 aa6.3□□□□□ -1.4
ERCC8-201ENST00000265038 ST8SIA2Q92186 375 aa6.3□□□□□ -1.4
ERCC8-201ENST00000265038 GINS3Q9BRX5 216 aa6.3□□□□□ -1.4
ERCC8-201ENST00000265038 VSIRQ9H7M9 311 aa6.3□□□□□ -1.4
ERCC8-201ENST00000265038 GSKIPQ9P0R6 139 aa6.3□□□□□ -1.4
ERCC8-201ENST00000265038 IGKV1D-37A0A075B6S9 117 aa6.3□□□□□ -1.4
ERCC8-201ENST00000265038 IGHV3-66A0A0C4DH42 116 aa6.3□□□□□ -1.4
ERCC8-201ENST00000265038 H3BP45 60 aa6.3□□□□□ -1.4
ERCC8-201ENST00000265038 SCGB2A1O75556 95 aa6.3□□□□□ -1.4
ERCC8-201ENST00000265038 LINC00322Q6ZN03 302 aaPredicted RBP6.3□□□□□ -1.4
ERCC8-201ENST00000265038 Q8WTZ3 238 aa6.3□□□□□ -1.4
ERCC8-201ENST00000265038 SMIM8Q96KF7 97 aa6.3□□□□□ -1.4
ERCC8-201ENST00000265038 SPAG8Q99932 426 aaPredicted RBP6.3□□□□□ -1.4
ERCC8-201ENST00000265038 PSENENQ9NZ42 101 aa6.3□□□□□ -1.4
ERCC8-201ENST00000265038 PMS2P5A8MQ11 134 aa6.29□□□□□ -1.4
ERCC8-201ENST00000265038 OR11H12B2RN74 326 aa6.29□□□□□ -1.4
ERCC8-201ENST00000265038 SSSCA1O60232 199 aa6.29□□□□□ -1.4
ERCC8-201ENST00000265038 SCGB1D2O95969 90 aa6.29□□□□□ -1.4
ERCC8-201ENST00000265038 TOMM40O96008 361 aa6.29□□□□□ -1.4
ERCC8-201ENST00000265038 MBPP02686 304 aaPredicted RBP6.29□□□□□ -1.4
ERCC8-201ENST00000265038 RD3LP0DJH9 198 aa6.29□□□□□ -1.4
ERCC8-201ENST00000265038 NPPCP23582 126 aa6.29□□□□□ -1.4
ERCC8-201ENST00000265038 CRYBB3P26998 211 aa6.29□□□□□ -1.4
ERCC8-201ENST00000265038 SLC35E1Q96K37 410 aa6.29□□□□□ -1.4
ERCC8-201ENST00000265038 TUBA4BQ9H853 241 aa6.29□□□□□ -1.4
ERCC8-201ENST00000265038 RCL1Q9Y2P8 373 aaKnown RBP6.29□□□□□ -1.4
ERCC8-201ENST00000265038 STRAPQ9Y3F4 350 aaKnown RBP6.29□□□□□ -1.4
ERCC8-201ENST00000265038 IGKV1OR2-108A0A075B7D4 117 aa6.28□□□□□ -1.4
ERCC8-201ENST00000265038 RBMY1BA6NDE4 496 aaKnown RBP6.28□□□□□ -1.4
ERCC8-201ENST00000265038 RBMY1EA6NEQ0 496 aaKnown RBP6.28□□□□□ -1.4
ERCC8-201ENST00000265038 FAM25EA8MYX2 175 aa6.28□□□□□ -1.4
ERCC8-201ENST00000265038 RBMY1DP0C7P1 496 aaKnown RBP6.28□□□□□ -1.4
ERCC8-201ENST00000265038 PSG1P11464 419 aa6.28□□□□□ -1.4
ERCC8-201ENST00000265038 ZNF90Q03938 601 aa6.28□□□□□ -1.4
ERCC8-201ENST00000265038 IL15RAQ13261 267 aa6.28□□□□□ -1.4
ERCC8-201ENST00000265038 USF2Q15853 346 aaPredicted RBP6.28□□□□□ -1.4
ERCC8-201ENST00000265038 TCF24Q7RTU0 167 aa6.28□□□□□ -1.4
ERCC8-201ENST00000265038 CITED4Q96RK1 184 aa6.28□□□□□ -1.4
ERCC8-201ENST00000265038 METTL26Q96S19 204 aa6.28□□□□□ -1.4
ERCC8-201ENST00000265038 MARVELD1Q9BSK0 173 aa6.28□□□□□ -1.4
ERCC8-201ENST00000265038 SRD5A3Q9H8P0 318 aa6.28□□□□□ -1.4
ERCC8-201ENST00000265038 U3KQE9 123 aa6.28□□□□□ -1.4
ERCC8-201ENST00000265038 SORL1Q92673 2214 aa6.28□□□□□ -1.4
ERCC8-201ENST00000265038 IGKV3-7A0A075B6H7 116 aa6.28□□□□□ -1.4
ERCC8-201ENST00000265038 C5orf51A6NDU8 294 aa6.28□□□□□ -1.4
ERCC8-201ENST00000265038 ZFP92A6NM28 416 aa6.28□□□□□ -1.4
ERCC8-201ENST00000265038 INMT-MINDY4F8WBC2 141 aa6.28□□□□□ -1.4
ERCC8-201ENST00000265038 CCNKO75909 580 aa6.28□□□□□ -1.4
ERCC8-201ENST00000265038 DFFBO76075 338 aa6.28□□□□□ -1.4
ERCC8-201ENST00000265038 IL4P05112 153 aa6.28□□□□□ -1.4
ERCC8-201ENST00000265038 TAS2R30P59541 319 aa6.28□□□□□ -1.4
ERCC8-201ENST00000265038 DEFA1P59665 94 aa6.28□□□□□ -1.4
ERCC8-201ENST00000265038 DEFA3P59666 94 aa6.28□□□□□ -1.4
ERCC8-201ENST00000265038 HAGHQ16775 308 aa6.28□□□□□ -1.4
ERCC8-201ENST00000265038 TMEM14EPQ6UXP3 125 aa6.28□□□□□ -1.4
ERCC8-201ENST00000265038 THAP8Q8NA92 274 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 144.2 ms