RNA–Protein interactions for RNA: ENST00000264346.11

HERC6-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERC6, Length 3,779 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-201ENST00000264346 DAZAP2Q15038 168 aaPredicted RBP10.28□□□□□ -0.76
HERC6-201ENST00000264346 VAMP3Q15836 100 aa10.28□□□□□ -0.76
HERC6-201ENST00000264346 HLA-DRB5Q30154 266 aa10.28□□□□□ -0.76
HERC6-201ENST00000264346 C5orf30Q96GV9 206 aa10.28□□□□□ -0.76
HERC6-201ENST00000264346 MAP1AP78559 2803 aaPredicted RBP10.28□□□□□ -0.76
HERC6-201ENST00000264346 ZNF785A8K8V0 405 aa10.28□□□□□ -0.76
HERC6-201ENST00000264346 TM4SF5O14894 197 aa10.28□□□□□ -0.76
HERC6-201ENST00000264346 HTR1DP28221 377 aa10.28□□□□□ -0.76
HERC6-201ENST00000264346 PPOXP50336 477 aa10.28□□□□□ -0.76
HERC6-201ENST00000264346 LBHQ53QV2 105 aaPredicted RBP10.28□□□□□ -0.76
HERC6-201ENST00000264346 ZNF596Q8TC21 504 aa10.28□□□□□ -0.76
HERC6-201ENST00000264346 AGMATQ9BSE5 352 aa10.28□□□□□ -0.76
HERC6-201ENST00000264346 TRAV1-1A0A0B4J248 108 aa10.27□□□□□ -0.76
HERC6-201ENST00000264346 RBFOX2O43251 390 aaKnown RBP eCLIP10.27□□□□□ -0.76
HERC6-201ENST00000264346 WNT2P09544 360 aa10.27□□□□□ -0.76
HERC6-201ENST00000264346 TDGF1P3P51864 188 aa10.27□□□□□ -0.76
HERC6-201ENST00000264346 SLC25A33Q9BSK2 321 aa10.27□□□□□ -0.76
HERC6-201ENST00000264346 TMEM178BH3BS89 294 aa10.27□□□□□ -0.77
HERC6-201ENST00000264346 C17orf58Q2M2W7 97 aa10.27□□□□□ -0.77
HERC6-201ENST00000264346 TMEM144Q7Z5S9 345 aa10.27□□□□□ -0.77
HERC6-201ENST00000264346 ABCA2Q9BZC7 2435 aa10.27□□□□□ -0.77
HERC6-201ENST00000264346 IGHV3-49A0A0A0MS15 119 aa10.27□□□□□ -0.77
HERC6-201ENST00000264346 FCGR2BP31994 310 aaPredicted RBP10.27□□□□□ -0.77
HERC6-201ENST00000264346 KLF17Q5JT82 389 aaPredicted RBP10.27□□□□□ -0.77
HERC6-201ENST00000264346 Q6ZN92 141 aa10.27□□□□□ -0.77
HERC6-201ENST00000264346 WNT10AQ9GZT5 417 aa10.27□□□□□ -0.77
HERC6-201ENST00000264346 LCN2P80188 198 aa10.26□□□□□ -0.77
HERC6-201ENST00000264346 PRCDQ00LT1 54 aa10.26□□□□□ -0.77
HERC6-201ENST00000264346 LINC00479Q96M42 142 aa10.26□□□□□ -0.77
HERC6-201ENST00000264346 SORL1Q92673 2214 aa10.26□□□□□ -0.77
HERC6-201ENST00000264346 E7EQL1 145 aa10.26□□□□□ -0.77
HERC6-201ENST00000264346 P01737 135 aa10.26□□□□□ -0.77
HERC6-201ENST00000264346 SRP14P37108 136 aaKnown RBP10.26□□□□□ -0.77
HERC6-201ENST00000264346 TCF15Q12870 199 aa10.26□□□□□ -0.77
HERC6-201ENST00000264346 MUC21A0A0G2JKD1 596 aa10.26□□□□□ -0.77
HERC6-201ENST00000264346 MUC21A0A140T8X8 626 aa10.26□□□□□ -0.77
HERC6-201ENST00000264346 SRRM4A7MD48 611 aaKnown RBP10.26□□□□□ -0.77
HERC6-201ENST00000264346 CLEC3BP05452 202 aa10.26□□□□□ -0.77
HERC6-201ENST00000264346 COL8A2P25067 703 aa10.26□□□□□ -0.77
HERC6-201ENST00000264346 RELQ04864 619 aaPredicted RBP10.26□□□□□ -0.77
HERC6-201ENST00000264346 MUC21Q5SSG8 566 aa10.26□□□□□ -0.77
HERC6-201ENST00000264346 LINC01551Q86U37 167 aa10.26□□□□□ -0.77
HERC6-201ENST00000264346 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.26□□□□□ -0.77
HERC6-201ENST00000264346 PRSS33Q8NF86 280 aa10.26□□□□□ -0.77
HERC6-201ENST00000264346 SCRT1Q9BWW7 348 aa10.26□□□□□ -0.77
HERC6-201ENST00000264346 AAMDCQ9H7C9 122 aa10.26□□□□□ -0.77
HERC6-201ENST00000264346 HIGD1AQ9Y241 93 aa10.26□□□□□ -0.77
HERC6-201ENST00000264346 YTHDF2Q9Y5A9 579 aaKnown RBP10.26□□□□□ -0.77
HERC6-201ENST00000264346 NUPR1O60356 82 aa10.25□□□□□ -0.77
HERC6-201ENST00000264346 GRNP28799 593 aaKnown RBP10.25□□□□□ -0.77
HERC6-201ENST00000264346 TCTAP57738 103 aa10.25□□□□□ -0.77
HERC6-201ENST00000264346 KLRD1Q13241 179 aa10.25□□□□□ -0.77
HERC6-201ENST00000264346 ARL2-SNX15V9GYD0 113 aa10.25□□□□□ -0.77
HERC6-201ENST00000264346 CGB1A6NKQ9 187 aa10.25□□□□□ -0.77
HERC6-201ENST00000264346 F2RL2O00254 374 aa10.25□□□□□ -0.77
HERC6-201ENST00000264346 GCGP01275 180 aa10.25□□□□□ -0.77
HERC6-201ENST00000264346 STAG3L2P0CL84 134 aa10.25□□□□□ -0.77
HERC6-201ENST00000264346 STAG3L3P0CL85 134 aa10.25□□□□□ -0.77
HERC6-201ENST00000264346 SRIP30626 198 aa10.25□□□□□ -0.77
HERC6-201ENST00000264346 FOXA3P55318 350 aaPredicted RBP10.25□□□□□ -0.77
HERC6-201ENST00000264346 MEF2CQ06413 473 aaPredicted RBP10.25□□□□□ -0.77
HERC6-201ENST00000264346 CD69Q07108 199 aa10.25□□□□□ -0.77
HERC6-201ENST00000264346 OR4C5Q8NGB2 326 aa10.25□□□□□ -0.77
HERC6-201ENST00000264346 OR5R1Q8NH85 324 aa10.25□□□□□ -0.77
HERC6-201ENST00000264346 ZCCHC14Q8WYQ9 949 aaKnown RBP10.25□□□□□ -0.77
HERC6-201ENST00000264346 TMEM133Q9H2Q1 129 aa10.25□□□□□ -0.77
HERC6-201ENST00000264346 CLEC5AQ9NY25 188 aa10.25□□□□□ -0.77
HERC6-201ENST00000264346 HSBP1L1C9JCN9 74 aa10.25□□□□□ -0.77
HERC6-201ENST00000264346 ODF3L1Q8IXM7 274 aa10.25□□□□□ -0.77
HERC6-201ENST00000264346 POLR3KQ9Y2Y1 108 aaPredicted RBP10.25□□□□□ -0.77
HERC6-201ENST00000264346 MUC3AQ02505 3323 aa10.25□□□□□ -0.77
HERC6-201ENST00000264346 POLQO75417 2590 aa10.25□□□□□ -0.77
HERC6-201ENST00000264346 COL4A2P08572 1712 aa10.25□□□□□ -0.77
HERC6-201ENST00000264346 C2CD3Q4AC94 2353 aa10.24□□□□□ -0.77
HERC6-201ENST00000264346 LIPFP07098 398 aa10.24□□□□□ -0.77
HERC6-201ENST00000264346 LOXL3P58215 753 aa10.24□□□□□ -0.77
HERC6-201ENST00000264346 GOLT1AQ6ZVE7 132 aa10.24□□□□□ -0.77
HERC6-201ENST00000264346 S100A7AQ86SG5 101 aa10.24□□□□□ -0.77
HERC6-201ENST00000264346 LYPD6BQ8NI32 183 aa10.24□□□□□ -0.77
HERC6-201ENST00000264346 LOC105371242A0A075B767 164 aa10.24□□□□□ -0.77
HERC6-201ENST00000264346 A0A1B0GW64 132 aa10.24□□□□□ -0.77
HERC6-201ENST00000264346 VENTXO95231 258 aa10.24□□□□□ -0.77
HERC6-201ENST00000264346 SELENOTP62341 195 aa10.24□□□□□ -0.77
HERC6-201ENST00000264346 PGLYRP4Q96LB8 373 aa10.24□□□□□ -0.77
HERC6-201ENST00000264346 ASCL2Q99929 193 aa10.24□□□□□ -0.77
HERC6-201ENST00000264346 LRRK2Q5S007 2527 aa10.24□□□□□ -0.77
HERC6-201ENST00000264346 NAV2Q8IVL1 2488 aa10.24□□□□□ -0.77
HERC6-201ENST00000264346 IL4P05112 153 aa10.24□□□□□ -0.77
HERC6-201ENST00000264346 NBEAP1P0C6P0 100 aa10.24□□□□□ -0.77
HERC6-201ENST00000264346 CNTFRP26992 372 aa10.24□□□□□ -0.77
HERC6-201ENST00000264346 LGALS7P47929 136 aa10.24□□□□□ -0.77
HERC6-201ENST00000264346 ZNF114Q8NC26 417 aa10.24□□□□□ -0.77
HERC6-201ENST00000264346 RNF2Q99496 336 aa10.24□□□□□ -0.77
HERC6-201ENST00000264346 FOXA2Q9Y261 457 aaPredicted RBP10.24□□□□□ -0.77
HERC6-201ENST00000264346 APCSP02743 223 aa10.23□□□□□ -0.77
HERC6-201ENST00000264346 AREGP15514 252 aa10.23□□□□□ -0.77
HERC6-201ENST00000264346 TPSG1Q9NRR2 321 aa10.23□□□□□ -0.77
HERC6-201ENST00000264346 IGHV3-66A0A0C4DH42 116 aa10.23□□□□□ -0.77
HERC6-201ENST00000264346 HNRNPA3P51991 378 aaKnown RBP10.23□□□□□ -0.77
HERC6-201ENST00000264346 ZNF672Q499Z4 452 aaPredicted RBP10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms